RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 TFRCP02786 760 aaKnown RBP6.68□□□□□ -1.34
CHD6-203ENST00000373233 SPIRE1Q08AE8 756 aa6.68□□□□□ -1.34
CHD6-203ENST00000373233 MKRN4PQ13434 485 aaPredicted RBP6.68□□□□□ -1.34
CHD6-203ENST00000373233 DDR2Q16832 855 aa6.68□□□□□ -1.34
CHD6-203ENST00000373233 SPRYD7Q5W111 196 aa6.68□□□□□ -1.34
CHD6-203ENST00000373233 C12orf56Q8IXR9 622 aa6.68□□□□□ -1.34
CHD6-203ENST00000373233 CLHC1Q8NHS4 586 aa6.68□□□□□ -1.34
CHD6-203ENST00000373233 GSDMCQ9BYG8 508 aa6.68□□□□□ -1.34
CHD6-203ENST00000373233 OLA1Q9NTK5 396 aaKnown RBP6.68□□□□□ -1.34
CHD6-203ENST00000373233 CLUP10909 449 aa6.68□□□□□ -1.34
CHD6-203ENST00000373233 GLRA2P23416 452 aa6.68□□□□□ -1.34
CHD6-203ENST00000373233 PURAQ00577 322 aaKnown RBP6.68□□□□□ -1.34
CHD6-203ENST00000373233 MEA1Q16626 185 aa6.68□□□□□ -1.34
CHD6-203ENST00000373233 KIZQ2M2Z5 673 aa6.68□□□□□ -1.34
CHD6-203ENST00000373233 CCNJLQ8IV13 435 aa6.68□□□□□ -1.34
CHD6-203ENST00000373233 C1orf131Q8NDD1 294 aaKnown RBP6.68□□□□□ -1.34
CHD6-203ENST00000373233 MCUBQ9NWR8 336 aa6.68□□□□□ -1.34
CHD6-203ENST00000373233 DPP3Q9NY33 737 aa6.68□□□□□ -1.34
CHD6-203ENST00000373233 ANKRD63C9JTQ0 380 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 SNRPAP09012 282 aaKnown RBP6.67□□□□□ -1.34
CHD6-203ENST00000373233 RARGP13631 454 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 PBX1P40424 430 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 ADCYAP1R1P41586 468 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 CCT8P50990 548 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 C2CD6Q53TS8 623 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 LBX2Q6XYB7 198 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 CAMK1DQ8IU85 385 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 BSNDQ8WZ55 320 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 PFDN5Q99471 154 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 SHROOM3Q8TF72 1996 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 SGPL1O95470 568 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 KCNK10P57789 538 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 GTF2BQ00403 316 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 GNASQ5JWF2 1037 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 RNF43Q68DV7 783 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 SZRD1Q7Z422 152 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 TMEM117Q9H0C3 514 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 PRKAG3Q9UGI9 489 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 PLXNA1Q9UIW2 1896 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 EFCAB10A6NFE3 127 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 H3BRB1 525 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 TMEM253P0C7T8 217 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 F8A1P23610 371 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 WDR72Q3MJ13 1102 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 SEZ6Q53EL9 994 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 RCOR2Q8IZ40 523 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 C8orf59Q8N0T1 100 aaPredicted RBP6.67□□□□□ -1.34
CHD6-203ENST00000373233 PPTC7Q8NI37 304 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 TAS1R2Q8TE23 839 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 AKAP1Q92667 903 aaKnown RBP eCLIP6.67□□□□□ -1.34
CHD6-203ENST00000373233 CDH19Q9H159 772 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 GANQ9H2C0 597 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 TUT1Q9H6E5 874 aaKnown RBP6.67□□□□□ -1.34
CHD6-203ENST00000373233 RAB26Q9ULW5 256 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 SNX7Q9UNH6 387 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 TPRKBQ9Y3C4 175 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 BTBD19C9JJ37 291 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 AGRPO00253 132 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 CPNE3O75131 537 aaKnown RBP6.67□□□□□ -1.34
CHD6-203ENST00000373233 MYO1DO94832 1006 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 SMIM10L2AP0DMW4 78 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 SMIM10L2BP0DMW5 78 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 TGFBR2P37173 567 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 FSCN1Q16658 493 aaKnown RBP6.67□□□□□ -1.34
CHD6-203ENST00000373233 DHRSXQ8N5I4 330 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 LRRC15Q8TF66 581 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 FAM149B1Q96BN6 582 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 C18orf8Q96DM3 657 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 TMEM161AQ9NX61 479 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 KBTBD13C9JR72 458 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 E5RI56 91 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 ALADP13716 330 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 STIP1P31948 543 aaKnown RBP6.67□□□□□ -1.34
CHD6-203ENST00000373233 OR2B6P58173 313 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 LSM3P62310 102 aaKnown RBP6.67□□□□□ -1.34
CHD6-203ENST00000373233 S100A12P80511 92 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 NFX1Q12986 1120 aaKnown RBP6.67□□□□□ -1.34
CHD6-203ENST00000373233 PUS10Q3MIT2 529 aaKnown RBP6.67□□□□□ -1.34
CHD6-203ENST00000373233 IRF2BP1Q8IU81 584 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 SLC9A9Q8IVB4 645 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 FAM129BQ96TA1 746 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 BDH2Q9BUT1 245 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 FRMD8Q9BZ67 464 aaPredicted RBP6.67□□□□□ -1.34
CHD6-203ENST00000373233 CAB39LQ9H9S4 337 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 GPAMQ9HCL2 828 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 CCDC177Q9NQR7 707 aaPredicted RBP6.67□□□□□ -1.34
CHD6-203ENST00000373233 FAM172BPA6NC97 362 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 CCNT2O60583 730 aaKnown RBP6.67□□□□□ -1.34
CHD6-203ENST00000373233 MSR1P21757 451 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 FDFT1P37268 417 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 PTENP60484 403 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 IFI35P80217 286 aaPredicted RBP6.67□□□□□ -1.34
CHD6-203ENST00000373233 TAP1Q03518 808 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 ACVR2BQ13705 512 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 TRADDQ15628 312 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 IQSEC1Q6DN90 963 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 BBS5Q8N3I7 341 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 TRPV1Q8NER1 839 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 MCFD2Q8NI22 146 aa6.67□□□□□ -1.34
CHD6-203ENST00000373233 PIK3R3Q92569 461 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms