RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 USP17L7P0C7H9 530 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 SNRPD1P62314 119 aaKnown RBP11.68□□□□□ -0.54
VCL-202ENST00000372755 ZNF844Q08AG5 666 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 IRGCQ6NXR0 463 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 UNC93AQ86WB7 457 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 ARMC8Q8IUR7 673 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 CHPFQ8IZ52 775 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 ADAM32Q8TC27 787 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 PIK3R5Q8WYR1 880 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 ELMO1Q92556 727 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 RHBGQ9H310 441 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 GDF3Q9NR23 364 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 PIH1D1Q9NWS0 290 aaKnown RBP11.68□□□□□ -0.54
VCL-202ENST00000372755 PCDHA11Q9Y5I1 949 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 FAM205AQ6ZU69 1335 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 TPP1O14773 563 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 MFN2O95140 757 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 MLYCDO95822 493 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 CCDC130P13994 396 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 RNF44Q7L0R7 432 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 SMYD1Q8NB12 490 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 BHLHE22Q8NFJ8 381 aaPredicted RBP11.68□□□□□ -0.54
VCL-202ENST00000372755 FNIP1Q8TF40 1166 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 BSNDQ8WZ55 320 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 WNT8BQ93098 351 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 SLC38A2Q96QD8 506 aa11.68□□□□□ -0.54
VCL-202ENST00000372755 IFNA16P05015 189 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 RBL1P28749 1068 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 NOS2P35228 1153 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 ATP5C1P36542 298 aaKnown RBP11.67□□□□□ -0.54
VCL-202ENST00000372755 RALGDSQ12967 914 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 AFTPHQ6ULP2 937 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 PAGE2Q7Z2X7 111 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 KIAA0895Q8NCT3 520 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 MYDGFQ969H8 173 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 MTMR8Q96EF0 704 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 OMDQ99983 421 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 SENP6Q9GZR1 1112 aaPredicted RBP11.67□□□□□ -0.54
VCL-202ENST00000372755 FAM192AQ9GZU8 254 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 RSPH9Q9H1X1 276 aaPredicted RBP11.67□□□□□ -0.54
VCL-202ENST00000372755 POLR1BQ9H9Y6 1135 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 EHD3Q9NZN3 535 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 MARCH2Q9P0N8 246 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 UBE2QL1A1L167 161 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 URADA6NGE7 173 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 SLITRK3O94933 977 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 TNK2Q07912 1038 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 NBPF12Q5TAG4 269 aaPredicted RBP11.67□□□□□ -0.54
VCL-202ENST00000372755 TTC23Q5W5X9 447 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 MAP4K3Q8IVH8 894 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 DSELQ8IZU8 1212 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 STK32AQ8WU08 396 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 PRCCQ92733 491 aaPredicted RBP11.67□□□□□ -0.54
VCL-202ENST00000372755 POP5Q969H6 163 aaKnown RBP11.67□□□□□ -0.54
VCL-202ENST00000372755 MYLPFQ96A32 169 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 SEMA6AQ9H2E6 1030 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 MRPL17Q9NRX2 175 aaKnown RBP11.67□□□□□ -0.54
VCL-202ENST00000372755 CMTM6Q9NX76 183 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 DDTLA6NHG4 134 aaPredicted RBP11.67□□□□□ -0.54
VCL-202ENST00000372755 KDELR1P24390 212 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 CROCCP3Q8IVE0 287 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 ULBP1Q9BZM6 244 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 ZFYVE1Q9HBF4 777 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 VPS45Q9NRW7 570 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 SOHLH2Q9NX45 425 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 COMMD9Q9P000 198 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 SLC28A1O00337 649 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 AMD1P17707 334 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 BDNFP23560 247 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 CLCN5P51795 746 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 MTAPQ13126 283 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 ZNF549Q6P9A3 640 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 METTL3Q86U44 580 aaKnown RBP11.67□□□□□ -0.54
VCL-202ENST00000372755 LRRC49Q8IUZ0 686 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 RNF148Q8N7C7 305 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 PPP3R2Q96LZ3 170 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 E5RJQ4 531 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 MAGEC1O60732 1142 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 CCNIQ14094 377 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 TTC27Q6P3X3 843 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 ZCCHC23Q6ZST2 131 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 PROSER1Q86XN7 944 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 DEPDC4Q8N2C3 294 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 ETNPPLQ8TBG4 499 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 ALG9Q9H6U8 611 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 PRDM8Q9NQV8 689 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 KCNQ5Q9NR82 932 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 LEF1Q9UJU2 399 aaPredicted RBP11.67□□□□□ -0.54
VCL-202ENST00000372755 MTF2Q9Y483 593 aaPredicted RBP11.67□□□□□ -0.54
VCL-202ENST00000372755 A0A0A0MRY4 1105 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 TRAV19A0A0A6YYK7 116 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 PROCP04070 461 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 PRG2P13727 222 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 ST3GAL1Q11201 340 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 RPTNQ6XPR3 784 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 FBXO30Q8TB52 745 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 SPATA13Q96N96 652 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 SLC9A7Q96T83 725 aa11.67□□□□□ -0.54
VCL-202ENST00000372755 MLPHQ9BV36 600 aaPredicted RBP11.67□□□□□ -0.54
VCL-202ENST00000372755 DYTNA2CJ06 578 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms