RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 AP4S1Q9Y587 144 aa15.04■□□□□ -0
COL9A2-202ENST00000372748 A0A0G2JLL6 359 aaPredicted RBP15.04■□□□□ -0
COL9A2-202ENST00000372748 H6PDO95479 791 aa15.04■□□□□ -0
COL9A2-202ENST00000372748 MAGEA12P43365 314 aa15.04■□□□□ -0
COL9A2-202ENST00000372748 SLC26A2P50443 739 aa15.04■□□□□ -0
COL9A2-202ENST00000372748 IFRD2Q12894 506 aaPredicted RBP15.04■□□□□ -0
COL9A2-202ENST00000372748 NAB1Q13506 487 aa15.04■□□□□ -0
COL9A2-202ENST00000372748 IKBKEQ14164 716 aa15.04■□□□□ -0
COL9A2-202ENST00000372748 PRRT2Q7Z6L0 340 aaPredicted RBP15.04■□□□□ -0
COL9A2-202ENST00000372748 CLEC14AQ86T13 490 aa15.04■□□□□ -0
COL9A2-202ENST00000372748 ERI1Q8IV48 349 aaKnown RBP15.04■□□□□ -0
COL9A2-202ENST00000372748 SPNS2Q8IVW8 549 aa15.04■□□□□ -0
COL9A2-202ENST00000372748 CCNYL1Q8N7R7 359 aa15.04■□□□□ -0
COL9A2-202ENST00000372748 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.04■□□□□ -0
COL9A2-202ENST00000372748 NDRG1Q92597 394 aaKnown RBP15.04■□□□□ -0
COL9A2-202ENST00000372748 NAT9Q9BTE0 207 aa15.04■□□□□ -0
COL9A2-202ENST00000372748 DPEP3Q9H4B8 488 aa15.04■□□□□ -0
COL9A2-202ENST00000372748 PRDM16Q9HAZ2 1276 aa15.04■□□□□ -0
COL9A2-202ENST00000372748 RRN3Q9NYV6 651 aa15.04■□□□□ -0
COL9A2-202ENST00000372748 VPS28Q9UK41 221 aa15.04■□□□□ -0
COL9A2-202ENST00000372748 DDNO94850 711 aaPredicted RBP15.03■□□□□ -0
COL9A2-202ENST00000372748 TPH1P17752 444 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 ARL4AP40617 200 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 SULT2A1Q06520 285 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 C16orf72Q14CZ0 275 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 ZNF554Q86TJ5 538 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 TMEM110Q86TL2 294 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 CPNE9Q8IYJ1 553 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 OR6B3Q8NGW1 331 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 FNDC8Q8TC99 324 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 SLC35F5Q8WV83 523 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 DRC3Q9H069 523 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 PRDM12Q9H4Q4 367 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 IARS2Q9NSE4 1012 aaKnown RBP15.03■□□□□ -0
COL9A2-202ENST00000372748 DNAJC25-GNG10A0A024R161 153 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 E7ENX8 843 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 TMX2-CTNND1H3BSU7 103 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 BOLA2-SMG1P6H3BVE0 249 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 SLC25A27O95847 323 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 PDGFRBP09619 1106 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 TFPTP0C1Z6 253 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 SBK3P0C264 359 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 CKMT2P17540 419 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 ADORA2BP29275 332 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 MAGEA10P43363 369 aaPredicted RBP15.03■□□□□ -0
COL9A2-202ENST00000372748 CDK9P50750 372 aaKnown RBP15.03■□□□□ -0
COL9A2-202ENST00000372748 SPANXN3Q5MJ09 141 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 CERCAMQ5T4B2 595 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 FAM219BQ5XKK7 198 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 AFG1LQ8WV93 481 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 VPS39Q96JC1 886 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 ZMAT2Q96NC0 199 aaKnown RBP15.03■□□□□ -0
COL9A2-202ENST00000372748 OMDQ99983 421 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 NOL11Q9H8H0 719 aaKnown RBP15.03■□□□□ -0
COL9A2-202ENST00000372748 CHRAC1Q9NRG0 131 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 OLAHQ9NV23 265 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 VANGL2Q9ULK5 521 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 A0A0G2JMZ2 1700 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 LRRC37A2A6NM11 1700 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 ZCWPW2A0A1B0GU75 182 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 TSPAN1O60635 241 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 SUPT3HO75486 399 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 EPHX2P34913 555 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 MPP3Q13368 585 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 ZNF460Q14592 562 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 KIZQ2M2Z5 673 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 APBA2Q99767 749 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 ZNF385DQ9H6B1 395 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 SNTG2Q9NY99 539 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 EBF1Q9UH73 591 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 MYRFQ9Y2G1 1151 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 USP3Q9Y6I4 520 aa15.03■□□□□ -0
COL9A2-202ENST00000372748 LTBP3Q9NS15 1303 aa15.02■□□□□ -0
COL9A2-202ENST00000372748 BRCA1P38398 1863 aaKnown RBP15.02■□□□□ -0
COL9A2-202ENST00000372748 PITX1P78337 314 aaPredicted RBP15.02■□□□□ -0
COL9A2-202ENST00000372748 CREB5Q02930 508 aa15.02■□□□□ -0
COL9A2-202ENST00000372748 ARHGAP1Q07960 439 aa15.02■□□□□ -0
COL9A2-202ENST00000372748 GRM3Q14832 879 aa15.02■□□□□ -0
COL9A2-202ENST00000372748 ADRM1Q16186 407 aa15.02■□□□□ -0
COL9A2-202ENST00000372748 FAM187BQ17R55 369 aa15.02■□□□□ -0
COL9A2-202ENST00000372748 ANKDD1AQ495B1 522 aa15.02■□□□□ -0
COL9A2-202ENST00000372748 LIPMQ5VYY2 423 aa15.02■□□□□ -0
COL9A2-202ENST00000372748 LAYNQ6UX15 382 aa15.02■□□□□ -0
COL9A2-202ENST00000372748 ARMCX2Q7L311 632 aa15.02■□□□□ -0
COL9A2-202ENST00000372748 CPSF7Q8N684 471 aaKnown RBP15.02■□□□□ -0
COL9A2-202ENST00000372748 FAM110BQ8TC76 370 aa15.02■□□□□ -0
COL9A2-202ENST00000372748 KCTD4Q8WVF5 259 aa15.02■□□□□ -0
COL9A2-202ENST00000372748 C18orf25Q96B23 403 aaPredicted RBP15.02■□□□□ -0
COL9A2-202ENST00000372748 PPWD1Q96BP3 646 aaKnown RBP15.02■□□□□ -0
COL9A2-202ENST00000372748 SGF29Q96ES7 293 aa15.02■□□□□ -0
COL9A2-202ENST00000372748 RMND5BQ96G75 393 aaPredicted RBP15.02■□□□□ -0
COL9A2-202ENST00000372748 ZNF597Q96LX8 424 aa15.02■□□□□ -0
COL9A2-202ENST00000372748 LRRC40Q9H9A6 602 aa15.02■□□□□ -0
COL9A2-202ENST00000372748 KLHL8Q9P2G9 620 aaPredicted RBP15.02■□□□□ -0
COL9A2-202ENST00000372748 TUBGCP4Q9UGJ1 667 aa15.02■□□□□ -0
COL9A2-202ENST00000372748 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.02■□□□□ -0
COL9A2-202ENST00000372748 C9IYK1 514 aa15.02□□□□□ -0.01
COL9A2-202ENST00000372748 CAPNS1P04632 268 aa15.02□□□□□ -0.01
COL9A2-202ENST00000372748 MPOP05164 745 aa15.02□□□□□ -0.01
COL9A2-202ENST00000372748 PSME3P61289 254 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms