RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 PDK1Q15118 436 aa16.63■□□□□ 0.25
TMEM53-203ENST00000372242 NYAP1Q6ZVC0 841 aa16.63■□□□□ 0.25
TMEM53-203ENST00000372242 LRRC49Q8IUZ0 686 aa16.63■□□□□ 0.25
TMEM53-203ENST00000372242 PTPRN2Q92932 1015 aa16.63■□□□□ 0.25
TMEM53-203ENST00000372242 HDAC11Q96DB2 347 aa16.63■□□□□ 0.25
TMEM53-203ENST00000372242 MS4A14Q96JA4 679 aa16.63■□□□□ 0.25
TMEM53-203ENST00000372242 NAPGQ99747 312 aaPredicted RBP16.63■□□□□ 0.25
TMEM53-203ENST00000372242 C1QTNF1Q9BXJ1 281 aa16.63■□□□□ 0.25
TMEM53-203ENST00000372242 TM6SF2Q9BZW4 377 aa16.63■□□□□ 0.25
TMEM53-203ENST00000372242 CTAGE9A4FU28 777 aa16.62■□□□□ 0.25
TMEM53-203ENST00000372242 ZNF185O15231 689 aa16.62■□□□□ 0.25
TMEM53-203ENST00000372242 SIN3BO75182 1162 aa16.62■□□□□ 0.25
TMEM53-203ENST00000372242 FGGP02679 453 aa16.62■□□□□ 0.25
TMEM53-203ENST00000372242 CXCL12P48061 93 aa16.62■□□□□ 0.25
TMEM53-203ENST00000372242 VASPP50552 380 aaPredicted RBP16.62■□□□□ 0.25
TMEM53-203ENST00000372242 PPIDQ08752 370 aaKnown RBP16.62■□□□□ 0.25
TMEM53-203ENST00000372242 AP1B1Q10567 949 aa16.62■□□□□ 0.25
TMEM53-203ENST00000372242 NOMO1Q15155 1222 aa16.62■□□□□ 0.25
TMEM53-203ENST00000372242 CYTH1Q15438 398 aa16.62■□□□□ 0.25
TMEM53-203ENST00000372242 C9orf64Q5T6V5 341 aa16.62■□□□□ 0.25
TMEM53-203ENST00000372242 C22orf39Q6P5X5 142 aa16.62■□□□□ 0.25
TMEM53-203ENST00000372242 SYT10Q6XYQ8 523 aa16.62■□□□□ 0.25
TMEM53-203ENST00000372242 DTWD2Q8NBA8 298 aa16.62■□□□□ 0.25
TMEM53-203ENST00000372242 TSGA13Q96PP4 275 aa16.62■□□□□ 0.25
TMEM53-203ENST00000372242 HHIPQ96QV1 700 aa16.62■□□□□ 0.25
TMEM53-203ENST00000372242 C10orf88Q9H8K7 445 aa16.62■□□□□ 0.25
TMEM53-203ENST00000372242 CD248Q9HCU0 757 aa16.62■□□□□ 0.25
TMEM53-203ENST00000372242 PRSS16Q9NQE7 514 aa16.62■□□□□ 0.25
TMEM53-203ENST00000372242 SLC8A2Q9UPR5 921 aa16.62■□□□□ 0.25
TMEM53-203ENST00000372242 EDDM13A0A1B0GTR0 161 aa16.61■□□□□ 0.25
TMEM53-203ENST00000372242 KCNK1O00180 336 aa16.61■□□□□ 0.25
TMEM53-203ENST00000372242 CCNCP24863 283 aa16.61■□□□□ 0.25
TMEM53-203ENST00000372242 CLCN6P51797 869 aa16.61■□□□□ 0.25
TMEM53-203ENST00000372242 STARD3Q14849 445 aa16.61■□□□□ 0.25
TMEM53-203ENST00000372242 INO80DQ53TQ3 878 aaPredicted RBP16.61■□□□□ 0.25
TMEM53-203ENST00000372242 BZW1Q7L1Q6 419 aaKnown RBP16.61■□□□□ 0.25
TMEM53-203ENST00000372242 TSEN2Q8NCE0 465 aaKnown RBP16.61■□□□□ 0.25
TMEM53-203ENST00000372242 ZNF419Q96HQ0 510 aaPredicted RBP16.61■□□□□ 0.25
TMEM53-203ENST00000372242 PBKQ96KB5 322 aa16.61■□□□□ 0.25
TMEM53-203ENST00000372242 EXOC2Q96KP1 924 aa16.61■□□□□ 0.25
TMEM53-203ENST00000372242 LRFN3Q9BTN0 628 aa16.61■□□□□ 0.25
TMEM53-203ENST00000372242 SLC6A17Q9H1V8 727 aa16.61■□□□□ 0.25
TMEM53-203ENST00000372242 SMARCAL1Q9NZC9 954 aa16.61■□□□□ 0.25
TMEM53-203ENST00000372242 SUN2Q9UH99 717 aa16.61■□□□□ 0.25
TMEM53-203ENST00000372242 CXorf51AA0A1B0GTR3 108 aa16.61■□□□□ 0.25
TMEM53-203ENST00000372242 TCRBV21S2A2A0A5A6 115 aa16.61■□□□□ 0.25
TMEM53-203ENST00000372242 PPP1R12AO14974 1030 aaPredicted RBP16.61■□□□□ 0.25
TMEM53-203ENST00000372242 MATN3O15232 486 aa16.61■□□□□ 0.25
TMEM53-203ENST00000372242 PXNP49023 591 aaPredicted RBP16.61■□□□□ 0.25
TMEM53-203ENST00000372242 CAMK2GQ13555 558 aaPredicted RBP16.61■□□□□ 0.25
TMEM53-203ENST00000372242 LBRQ14739 615 aaKnown RBP16.61■□□□□ 0.25
TMEM53-203ENST00000372242 ATXN7L2Q5T6C5 722 aaPredicted RBP16.61■□□□□ 0.25
TMEM53-203ENST00000372242 TMCO4Q5TGY1 634 aa16.61■□□□□ 0.25
TMEM53-203ENST00000372242 TSSK4Q6SA08 328 aa16.61■□□□□ 0.25
TMEM53-203ENST00000372242 CACUL1Q86Y37 369 aa16.61■□□□□ 0.25
TMEM53-203ENST00000372242 CCDC13Q8IYE1 715 aa16.61■□□□□ 0.25
TMEM53-203ENST00000372242 OR2A12Q8NGT7 310 aa16.61■□□□□ 0.25
TMEM53-203ENST00000372242 OR6K2Q8NGY2 324 aa16.61■□□□□ 0.25
TMEM53-203ENST00000372242 ATG4AQ8WYN0 398 aa16.61■□□□□ 0.25
TMEM53-203ENST00000372242 ZNF599Q96NL3 588 aa16.61■□□□□ 0.25
TMEM53-203ENST00000372242 IER2Q9BTL4 223 aa16.61■□□□□ 0.25
TMEM53-203ENST00000372242 CKAP5Q14008 2032 aa16.61■□□□□ 0.25
TMEM53-203ENST00000372242 KMT2EQ8IZD2 1858 aa16.6■□□□□ 0.25
TMEM53-203ENST00000372242 WDFY4Q6ZS81 3184 aa16.6■□□□□ 0.25
TMEM53-203ENST00000372242 H7C0C1 242 aa16.6■□□□□ 0.25
TMEM53-203ENST00000372242 MUSKO15146 869 aa16.6■□□□□ 0.25
TMEM53-203ENST00000372242 CCNB1P14635 433 aa16.6■□□□□ 0.25
TMEM53-203ENST00000372242 ATP5OP48047 213 aa16.6■□□□□ 0.25
TMEM53-203ENST00000372242 CCR3P51677 355 aa16.6■□□□□ 0.25
TMEM53-203ENST00000372242 DGKEP52429 567 aa16.6■□□□□ 0.25
TMEM53-203ENST00000372242 EIF3EP60228 445 aaKnown RBP16.6■□□□□ 0.25
TMEM53-203ENST00000372242 RHOAP61586 193 aa16.6■□□□□ 0.25
TMEM53-203ENST00000372242 LONRF2Q1L5Z9 754 aa16.6■□□□□ 0.25
TMEM53-203ENST00000372242 MARC1Q5VT66 337 aa16.6■□□□□ 0.25
TMEM53-203ENST00000372242 PAPD7Q5XG87 772 aaKnown RBP16.6■□□□□ 0.25
TMEM53-203ENST00000372242 TIGD7Q6NT04 549 aaPredicted RBP16.6■□□□□ 0.25
TMEM53-203ENST00000372242 C1orf210Q8IVY1 113 aa16.6■□□□□ 0.25
TMEM53-203ENST00000372242 STK40Q8N2I9 435 aa16.6■□□□□ 0.25
TMEM53-203ENST00000372242 PCDH20Q8N6Y1 951 aaKnown RBP16.6■□□□□ 0.25
TMEM53-203ENST00000372242 TFB1MQ8WVM0 346 aaKnown RBP16.6■□□□□ 0.25
TMEM53-203ENST00000372242 CASKIN2Q8WXE0 1202 aa16.6■□□□□ 0.25
TMEM53-203ENST00000372242 CINPQ9BW66 212 aaPredicted RBP16.6■□□□□ 0.25
TMEM53-203ENST00000372242 CEP41Q9BYV8 373 aa16.6■□□□□ 0.25
TMEM53-203ENST00000372242 CEP44Q9C0F1 390 aa16.6■□□□□ 0.25
TMEM53-203ENST00000372242 MKRN2Q9H000 416 aaKnown RBP16.6■□□□□ 0.25
TMEM53-203ENST00000372242 SEPT10Q9P0V9 454 aa16.6■□□□□ 0.25
TMEM53-203ENST00000372242 LHX3Q9UBR4 397 aa16.6■□□□□ 0.25
TMEM53-203ENST00000372242 CACNA1IQ9P0X4 2223 aa16.6■□□□□ 0.25
TMEM53-203ENST00000372242 TARSL2A2RTX5 802 aaKnown RBP16.59■□□□□ 0.25
TMEM53-203ENST00000372242 LAMTOR5O43504 91 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 GJB3O75712 270 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 RBP3P10745 1247 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 CASQ1P31415 396 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 RGRP47804 291 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 COPAP53621 1224 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 PRKD1Q15139 912 aaPredicted RBP16.59■□□□□ 0.25
TMEM53-203ENST00000372242 SIX1Q15475 284 aaPredicted RBP16.59■□□□□ 0.25
TMEM53-203ENST00000372242 ANO7Q6IWH7 933 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 MAMSTRQ6ZN01 415 aa16.59■□□□□ 0.25
TMEM53-203ENST00000372242 DPY19L3Q6ZPD9 716 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms