RNA–Protein interactions for RNA: ENST00000371941.3

PREX1-201, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREX1, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX1-201ENST00000371941 DPY30Q9C005 99 aa13.67□□□□□ -0.22
PREX1-201ENST00000371941 LRCH1Q9Y2L9 728 aa13.67□□□□□ -0.22
PREX1-201ENST00000371941 FASP25445 335 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 HOXD13P35453 343 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 RENBPP51606 427 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 MPP1Q00013 466 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 C9orf57Q5W0N0 161 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 KYAT3Q6YP21 454 aaKnown RBP13.66□□□□□ -0.22
PREX1-201ENST00000371941 BBS12Q6ZW61 710 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 BTN2A2Q8WVV5 523 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 HBEGFQ99075 208 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 SAR1AQ9NR31 198 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 NMRK1Q9NWW6 199 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 MARCH2Q9P0N8 246 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 PADI4Q9UM07 663 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 ALOX15BO15296 676 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 TREHO43280 583 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 CCL23P55773 120 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 LAMB3Q13751 1172 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 RD3Q7Z3Z2 195 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 GLIS1Q8NBF1 620 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 WDR48Q8TAF3 677 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 KLQ9UEF7 1012 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 C5P01031 1676 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 NTRK1P04629 796 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 GRK4P32298 578 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 SP2Q02086 613 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 TRIM25Q14258 630 aaKnown RBP13.66□□□□□ -0.22
PREX1-201ENST00000371941 ZNF280DQ6N043 979 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 SPPL2AQ8TCT8 520 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 ABHD8Q96I13 439 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 ACSS3Q9H6R3 686 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 SNED1Q8TER0 1413 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 SERPINB10P48595 397 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 NEK2P51955 445 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 DRG2P55039 364 aaKnown RBP13.66□□□□□ -0.22
PREX1-201ENST00000371941 FKBP1AP62942 108 aaKnown RBP13.66□□□□□ -0.22
PREX1-201ENST00000371941 RNF220Q5VTB9 566 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 ZDHHC24Q6UX98 284 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 CTU1Q7Z7A3 348 aaKnown RBP13.66□□□□□ -0.22
PREX1-201ENST00000371941 ZDHHC17Q8IUH5 632 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 ANKRD52Q8NB46 1076 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 HDAC10Q969S8 669 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 PARVBQ9HBI1 364 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 VTA1Q9NP79 307 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 MGAT4DA6NG13 374 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 MTX3Q5HYI7 312 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 PACS1Q6VY07 963 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 FAM126BQ8IXS8 530 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 PPP2R3CQ969Q6 453 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 SLC7A5P2Q9GIP4 190 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 ZDHHC6Q9H6R6 413 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.66□□□□□ -0.22
PREX1-201ENST00000371941 PLK2Q9NYY3 685 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 PCDHB8Q9UN66 801 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 TELO2Q9Y4R8 837 aa13.66□□□□□ -0.22
PREX1-201ENST00000371941 ZNF142P52746 1687 aaPredicted RBP13.66□□□□□ -0.22
PREX1-201ENST00000371941 CRABP2P29373 138 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 GPC1P35052 558 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 GRIA1P42261 906 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 TRMT10BQ6PF06 316 aaKnown RBP13.65□□□□□ -0.22
PREX1-201ENST00000371941 ZNF621Q6ZSS3 439 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 TSHZ1Q6ZSZ6 1077 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 GPSM1Q86YR5 675 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 MIEF2Q96C03 454 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 IPPQ9Y573 584 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.65□□□□□ -0.22
PREX1-201ENST00000371941 CLOCKO15516 846 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 TOP3BO95985 862 aaKnown RBP13.65□□□□□ -0.22
PREX1-201ENST00000371941 FOXN2P32314 431 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 SEMG2Q02383 582 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 CLEC6AQ6EIG7 209 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 TRMT11Q7Z4G4 463 aaKnown RBP13.65□□□□□ -0.22
PREX1-201ENST00000371941 SLC22A9Q8IVM8 553 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 FAM13CQ8NE31 585 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 CLHC1Q8NHS4 586 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 MAGEB16A2A368 324 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 PSMD12O00232 456 aaPredicted RBP13.65□□□□□ -0.22
PREX1-201ENST00000371941 TRIM16LQ309B1 348 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 RHBDF2Q6PJF5 856 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 SEMA3CQ99985 751 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 SLC4A5Q9BY07 1137 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 HACD1B0YJ81 288 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 SKIV2L2P42285 1042 aaKnown RBP13.65□□□□□ -0.22
PREX1-201ENST00000371941 RALGPS1Q5JS13 557 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 CNSTQ6PJW8 725 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 MARK2Q7KZI7 788 aaKnown RBP13.65□□□□□ -0.22
PREX1-201ENST00000371941 ZNF410Q86VK4 478 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 FAM228AQ86W67 206 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 PLD5Q8N7P1 536 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 MFSD3Q96ES6 412 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 FAR2Q96K12 515 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 CSPG4P5Q96PW8 444 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 ACE2Q9BYF1 805 aaPredicted RBP13.65□□□□□ -0.22
PREX1-201ENST00000371941 TRPV2Q9Y5S1 764 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 IGKV6D-41A0A0C4DH26 115 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 NCAM2O15394 837 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 MT-CYBP00156 380 aaPredicted RBP13.65□□□□□ -0.22
PREX1-201ENST00000371941 PSMD5Q16401 504 aa13.65□□□□□ -0.22
PREX1-201ENST00000371941 ASTE1Q2TB18 679 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms