RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 TBC1D3GQ6DHY5 549 aa14.93□□□□□ -0.02
NDC1-201ENST00000371429 TBC1D3CQ6IPX1 549 aa14.93□□□□□ -0.02
NDC1-201ENST00000371429 TBC1D3Q8IZP1 549 aaPredicted RBP14.93□□□□□ -0.02
NDC1-201ENST00000371429 NKAPQ8N5F7 415 aaKnown RBP14.93□□□□□ -0.02
NDC1-201ENST00000371429 APOPT1Q96IL0 206 aa14.93□□□□□ -0.02
NDC1-201ENST00000371429 FGFBP2Q9BYJ0 223 aa14.93□□□□□ -0.02
NDC1-201ENST00000371429 ST6GALNAC4Q9H4F1 302 aa14.93□□□□□ -0.02
NDC1-201ENST00000371429 PTPRHQ9HD43 1115 aa14.93□□□□□ -0.02
NDC1-201ENST00000371429 KRCC1Q9NPI7 259 aaPredicted RBP14.93□□□□□ -0.02
NDC1-201ENST00000371429 PIK3C2AO00443 1686 aa14.93□□□□□ -0.02
NDC1-201ENST00000371429 QSOX1O00391 747 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 ZNF682O95780 498 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 CORO1AP31146 461 aaKnown RBP14.92□□□□□ -0.02
NDC1-201ENST00000371429 RPL22P35268 128 aaKnown RBP14.92□□□□□ -0.02
NDC1-201ENST00000371429 GPR15P49685 360 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 PEX5P50542 639 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 PTPN20Q4JDL3 420 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 STXBP5Q5T5C0 1151 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 AFTPHQ6ULP2 937 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 KREMEN1Q96MU8 473 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 HGH1Q9BTY7 390 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.92□□□□□ -0.02
NDC1-201ENST00000371429 TNPO3Q9Y5L0 923 aaKnown RBP14.92□□□□□ -0.02
NDC1-201ENST00000371429 KLRG2A4D1S0 409 aaPredicted RBP14.92□□□□□ -0.02
NDC1-201ENST00000371429 EIF4E1BA6NMX2 242 aaKnown RBP14.92□□□□□ -0.02
NDC1-201ENST00000371429 MDM4O15151 490 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 SLC1A6P48664 564 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 LILRA4P59901 499 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 ATAD3BQ5T9A4 648 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 CYP4Z1Q86W10 505 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 JOSD2Q8TAC2 188 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 STAG3L4Q8TBR4 150 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 ACBD6Q9BR61 282 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 TMEM120AQ9BXJ8 343 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 C11orf49Q9H6J7 331 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 SCN3BQ9NY72 215 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 MEI4A8MW99 385 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 LPOP22079 712 aaPredicted RBP14.92□□□□□ -0.02
NDC1-201ENST00000371429 PLOD1Q02809 727 aaPredicted RBP14.92□□□□□ -0.02
NDC1-201ENST00000371429 BNC2Q6ZN30 1099 aaPredicted RBP14.92□□□□□ -0.02
NDC1-201ENST00000371429 ZNF655Q8N720 491 aaPredicted RBP14.92□□□□□ -0.02
NDC1-201ENST00000371429 HDAC7Q8WUI4 952 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 C11orf84Q9BUA3 381 aaPredicted RBP14.92□□□□□ -0.02
NDC1-201ENST00000371429 SLC45A1Q9Y2W3 748 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 GRM6O15303 877 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 ALBP02768 609 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 PTPRNQ16849 979 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 VARS2Q5ST30 1063 aaKnown RBP14.92□□□□□ -0.02
NDC1-201ENST00000371429 WLSQ5T9L3 541 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 DAB2IPQ5VWQ8 1189 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 UNC5AQ6ZN44 842 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 CREG2Q8IUH2 290 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 ZNF384Q8TF68 577 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 ATL1Q8WXF7 558 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 MCRS1Q96EZ8 462 aa14.92□□□□□ -0.02
NDC1-201ENST00000371429 A0A087X1B8 175 aa14.91□□□□□ -0.02
NDC1-201ENST00000371429 KANSL1LA0AUZ9 987 aa14.91□□□□□ -0.02
NDC1-201ENST00000371429 C22orf31O95567 290 aa14.91□□□□□ -0.02
NDC1-201ENST00000371429 C1RP00736 705 aa14.91□□□□□ -0.02
NDC1-201ENST00000371429 C4BPAP04003 597 aaKnown RBP14.91□□□□□ -0.02
NDC1-201ENST00000371429 ELFN1P0C7U0 828 aa14.91□□□□□ -0.02
NDC1-201ENST00000371429 CDK7P50613 346 aa14.91□□□□□ -0.02
NDC1-201ENST00000371429 GRAMD4Q6IC98 578 aa14.91□□□□□ -0.02
NDC1-201ENST00000371429 OR6K2Q8NGY2 324 aa14.91□□□□□ -0.02
NDC1-201ENST00000371429 KLHL5Q96PQ7 755 aa14.91□□□□□ -0.02
NDC1-201ENST00000371429 CAAP1Q9H8G2 361 aa14.91□□□□□ -0.02
NDC1-201ENST00000371429 EXOSC4Q9NPD3 245 aaKnown RBP14.91□□□□□ -0.02
NDC1-201ENST00000371429 FBXO6Q9NRD1 293 aaPredicted RBP14.91□□□□□ -0.02
NDC1-201ENST00000371429 NCANO14594 1321 aa14.91□□□□□ -0.02
NDC1-201ENST00000371429 hCG_1818297A0A087WSY0 165 aa14.91□□□□□ -0.02
NDC1-201ENST00000371429 PKN2Q16513 984 aaKnown RBP14.91□□□□□ -0.02
NDC1-201ENST00000371429 IRF2BP2Q7Z5L9 587 aa14.91□□□□□ -0.02
NDC1-201ENST00000371429 CPXM1Q96SM3 734 aa14.91□□□□□ -0.02
NDC1-201ENST00000371429 ARMC7Q9H6L4 198 aa14.91□□□□□ -0.02
NDC1-201ENST00000371429 ARVCFO00192 962 aa14.91□□□□□ -0.02
NDC1-201ENST00000371429 FPGSQ05932 587 aa14.91□□□□□ -0.02
NDC1-201ENST00000371429 CSTF3Q12996 717 aaKnown RBP14.91□□□□□ -0.02
NDC1-201ENST00000371429 PPP1R15BQ5SWA1 713 aa14.91□□□□□ -0.02
NDC1-201ENST00000371429 PSRC1Q6PGN9 363 aaPredicted RBP14.91□□□□□ -0.02
NDC1-201ENST00000371429 COLGALT2Q8IYK4 626 aa14.91□□□□□ -0.02
NDC1-201ENST00000371429 SNX27Q96L92 541 aa14.91□□□□□ -0.02
NDC1-201ENST00000371429 VTI1BQ9UEU0 232 aa14.91□□□□□ -0.02
NDC1-201ENST00000371429 ABCC6O95255 1503 aa14.91□□□□□ -0.02
NDC1-201ENST00000371429 CACNB4O00305 520 aaPredicted RBP14.91□□□□□ -0.02
NDC1-201ENST00000371429 GSTM1P09488 218 aa14.91□□□□□ -0.02
NDC1-201ENST00000371429 IMPDH2P12268 514 aa14.91□□□□□ -0.02
NDC1-201ENST00000371429 MMP8P22894 467 aa14.91□□□□□ -0.02
NDC1-201ENST00000371429 ADRA1DP25100 572 aa14.91□□□□□ -0.02
NDC1-201ENST00000371429 CLK2P49760 499 aaKnown RBP14.91□□□□□ -0.02
NDC1-201ENST00000371429 RASA2Q15283 850 aa14.91□□□□□ -0.02
NDC1-201ENST00000371429 CERS2Q96G23 380 aa14.91□□□□□ -0.02
NDC1-201ENST00000371429 GUCY1B2O75343 617 aa14.9□□□□□ -0.02
NDC1-201ENST00000371429 FTH1P02794 183 aa14.9□□□□□ -0.02
NDC1-201ENST00000371429 PTPN2P17706 415 aa14.9□□□□□ -0.02
NDC1-201ENST00000371429 MARCKSL1P49006 195 aa14.9□□□□□ -0.02
NDC1-201ENST00000371429 POMKQ9H5K3 350 aa14.9□□□□□ -0.02
NDC1-201ENST00000371429 TMPRSS4Q9NRS4 437 aa14.9□□□□□ -0.02
NDC1-201ENST00000371429 THAP1Q9NVV9 213 aa14.9□□□□□ -0.02
NDC1-201ENST00000371429 SLC25A14O95258 325 aaPredicted RBP14.9□□□□□ -0.02
NDC1-201ENST00000371429 RPL17P18621 184 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms