RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 FARP1Q9Y4F1 1045 aaPredicted RBP15.83■□□□□ 0.12
PRPF38B-202ENST00000370022 K7ERQ8 282 aa15.82■□□□□ 0.12
PRPF38B-202ENST00000370022 CES2O00748 559 aa15.82■□□□□ 0.12
PRPF38B-202ENST00000370022 MATN3O15232 486 aa15.82■□□□□ 0.12
PRPF38B-202ENST00000370022 SMAD6O43541 496 aaKnown RBP15.82■□□□□ 0.12
PRPF38B-202ENST00000370022 ZNF189O75820 626 aaPredicted RBP15.82■□□□□ 0.12
PRPF38B-202ENST00000370022 TMCC1O94876 653 aa15.82■□□□□ 0.12
PRPF38B-202ENST00000370022 ATP1A1P05023 1023 aaKnown RBP15.82■□□□□ 0.12
PRPF38B-202ENST00000370022 PECAM1P16284 738 aaPredicted RBP15.82■□□□□ 0.12
PRPF38B-202ENST00000370022 COL9A1P20849 921 aa15.82■□□□□ 0.12
PRPF38B-202ENST00000370022 RECQLP46063 649 aaPredicted RBP15.82■□□□□ 0.12
PRPF38B-202ENST00000370022 RENBPP51606 427 aa15.82■□□□□ 0.12
PRPF38B-202ENST00000370022 SATB1Q01826 763 aa15.82■□□□□ 0.12
PRPF38B-202ENST00000370022 XRCC4Q13426 336 aa15.82■□□□□ 0.12
PRPF38B-202ENST00000370022 HNRNPDQ14103 355 aaKnown RBP15.82■□□□□ 0.12
PRPF38B-202ENST00000370022 ELAVL3Q14576 367 aaKnown RBP15.82■□□□□ 0.12
PRPF38B-202ENST00000370022 NPNTQ6UXI9 565 aa15.82■□□□□ 0.12
PRPF38B-202ENST00000370022 TMEM92Q6UXU6 159 aa15.82■□□□□ 0.12
PRPF38B-202ENST00000370022 SLC13A5Q86YT5 568 aaPredicted RBP15.82■□□□□ 0.12
PRPF38B-202ENST00000370022 CCDC13Q8IYE1 715 aa15.82■□□□□ 0.12
PRPF38B-202ENST00000370022 CCNYQ8ND76 341 aa15.82■□□□□ 0.12
PRPF38B-202ENST00000370022 TSTD1Q8NFU3 115 aa15.82■□□□□ 0.12
PRPF38B-202ENST00000370022 MAIP1Q8WWC4 291 aa15.82■□□□□ 0.12
PRPF38B-202ENST00000370022 HERPUD2Q9BSE4 406 aa15.82■□□□□ 0.12
PRPF38B-202ENST00000370022 CD248Q9HCU0 757 aa15.82■□□□□ 0.12
PRPF38B-202ENST00000370022 PRSS16Q9NQE7 514 aa15.82■□□□□ 0.12
PRPF38B-202ENST00000370022 FBXO4Q9UKT5 387 aa15.82■□□□□ 0.12
PRPF38B-202ENST00000370022 FCF1Q9Y324 198 aaKnown RBP15.82■□□□□ 0.12
PRPF38B-202ENST00000370022 HACD1B0YJ81 288 aa15.81■□□□□ 0.12
PRPF38B-202ENST00000370022 ALOX15BO15296 676 aa15.81■□□□□ 0.12
PRPF38B-202ENST00000370022 MAP3K6O95382 1288 aa15.81■□□□□ 0.12
PRPF38B-202ENST00000370022 APBB3O95704 486 aa15.81■□□□□ 0.12
PRPF38B-202ENST00000370022 GSRP00390 522 aa15.81■□□□□ 0.12
PRPF38B-202ENST00000370022 C7P10643 843 aa15.81■□□□□ 0.12
PRPF38B-202ENST00000370022 HSPA9P38646 679 aaKnown RBP15.81■□□□□ 0.12
PRPF38B-202ENST00000370022 SNRPD1P62314 119 aaKnown RBP15.81■□□□□ 0.12
PRPF38B-202ENST00000370022 LBRQ14739 615 aaKnown RBP15.81■□□□□ 0.12
PRPF38B-202ENST00000370022 C9orf64Q5T6V5 341 aa15.81■□□□□ 0.12
PRPF38B-202ENST00000370022 MARC1Q5VT66 337 aa15.81■□□□□ 0.12
PRPF38B-202ENST00000370022 KIAA1211LQ6NV74 962 aa15.81■□□□□ 0.12
PRPF38B-202ENST00000370022 C17orf53Q8N3J3 647 aaPredicted RBP15.81■□□□□ 0.12
PRPF38B-202ENST00000370022 ZNF366Q8N895 744 aa15.81■□□□□ 0.12
PRPF38B-202ENST00000370022 OR2T3Q8NH03 318 aa15.81■□□□□ 0.12
PRPF38B-202ENST00000370022 TFB1MQ8WVM0 346 aaKnown RBP15.81■□□□□ 0.12
PRPF38B-202ENST00000370022 MAML1Q92585 1016 aa15.81■□□□□ 0.12
PRPF38B-202ENST00000370022 NAPGQ99747 312 aaPredicted RBP15.81■□□□□ 0.12
PRPF38B-202ENST00000370022 PRRX2Q99811 253 aa15.81■□□□□ 0.12
PRPF38B-202ENST00000370022 FRMD8P1Q9BZ68 369 aaPredicted RBP15.81■□□□□ 0.12
PRPF38B-202ENST00000370022 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.81■□□□□ 0.12
PRPF38B-202ENST00000370022 SAE1Q9UBE0 346 aaPredicted RBP15.81■□□□□ 0.12
PRPF38B-202ENST00000370022 SEPT3Q9UH03 358 aa15.81■□□□□ 0.12
PRPF38B-202ENST00000370022 AMACRQ9UHK6 382 aa15.81■□□□□ 0.12
PRPF38B-202ENST00000370022 SNX12Q9UMY4 172 aa15.81■□□□□ 0.12
PRPF38B-202ENST00000370022 TCRBV21S2A2A0A5A6 115 aa15.8■□□□□ 0.12
PRPF38B-202ENST00000370022 CTAGE9A4FU28 777 aa15.8■□□□□ 0.12
PRPF38B-202ENST00000370022 MCF2LO15068 1137 aa15.8■□□□□ 0.12
PRPF38B-202ENST00000370022 MTSS1O43312 755 aa15.8■□□□□ 0.12
PRPF38B-202ENST00000370022 RNASEH1O60930 286 aaKnown RBP15.8■□□□□ 0.12
PRPF38B-202ENST00000370022 SIN3BO75182 1162 aa15.8■□□□□ 0.12
PRPF38B-202ENST00000370022 ZNF821O75541 412 aaPredicted RBP15.8■□□□□ 0.12
PRPF38B-202ENST00000370022 PEX11BO96011 259 aa15.8■□□□□ 0.12
PRPF38B-202ENST00000370022 PRLRP16471 622 aa15.8■□□□□ 0.12
PRPF38B-202ENST00000370022 TCP1P17987 556 aaKnown RBP15.8■□□□□ 0.12
PRPF38B-202ENST00000370022 RHOAP61586 193 aa15.8■□□□□ 0.12
PRPF38B-202ENST00000370022 AP1B1Q10567 949 aa15.8■□□□□ 0.12
PRPF38B-202ENST00000370022 NOMO1Q15155 1222 aa15.8■□□□□ 0.12
PRPF38B-202ENST00000370022 CYTH1Q15438 398 aa15.8■□□□□ 0.12
PRPF38B-202ENST00000370022 CARD16Q5EG05 197 aa15.8■□□□□ 0.12
PRPF38B-202ENST00000370022 LEKR1Q6ZMV7 388 aa15.8■□□□□ 0.12
PRPF38B-202ENST00000370022 Q6ZVU0 165 aa15.8■□□□□ 0.12
PRPF38B-202ENST00000370022 DSG4Q86SJ6 1040 aa15.8■□□□□ 0.12
PRPF38B-202ENST00000370022 OR2AP1Q8NGE2 309 aa15.8■□□□□ 0.12
PRPF38B-202ENST00000370022 ACTL9Q8TC94 416 aa15.8■□□□□ 0.12
PRPF38B-202ENST00000370022 OR8D1Q8WZ84 308 aa15.8■□□□□ 0.12
PRPF38B-202ENST00000370022 PSKH2Q96QS6 385 aa15.8■□□□□ 0.12
PRPF38B-202ENST00000370022 WDR24Q96S15 920 aa15.8■□□□□ 0.12
PRPF38B-202ENST00000370022 LGMNQ99538 433 aa15.8■□□□□ 0.12
PRPF38B-202ENST00000370022 CINPQ9BW66 212 aaPredicted RBP15.8■□□□□ 0.12
PRPF38B-202ENST00000370022 C2orf42Q9NWW7 574 aa15.8■□□□□ 0.12
PRPF38B-202ENST00000370022 EBF1Q9UH73 591 aa15.8■□□□□ 0.12
PRPF38B-202ENST00000370022 ACTL7AQ9Y615 435 aa15.8■□□□□ 0.12
PRPF38B-202ENST00000370022 CCDC163A0A0D9SF12 145 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 K7ESF4 209 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 CEP104O60308 925 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 TUBB4AP04350 444 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 CXCR5P32302 372 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 ETF1P62495 437 aaKnown RBP15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 OTUD4Q01804 1114 aaKnown RBP15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 ZBTB16Q05516 673 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 NSUN2Q08J23 767 aaKnown RBP eCLIP15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 SLC10A7Q0GE19 358 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 ZNF235Q14590 738 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 PRKD1Q15139 912 aaPredicted RBP15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 ZNF528Q3MIS6 628 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 PAPD7Q5XG87 772 aaKnown RBP15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 RASSF3Q86WH2 238 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 TEX26Q8N6G2 289 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 OR2A12Q8NGT7 310 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 HAUS1Q96CS2 278 aa15.79■□□□□ 0.12
PRPF38B-202ENST00000370022 LRIG1Q96JA1 1093 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms