RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 ZMYM5Q9UJ78 669 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 KCNH1O95259 989 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 HALP42357 657 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 TUBP50607 506 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 IL27RAQ6UWB1 636 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 TFAP2DQ7Z6R9 452 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 ZNF605Q86T29 641 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 CYP4X1Q8N118 509 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 SYT15Q9BQS2 421 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 XPR1Q9UBH6 696 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 BTBD3Q9Y2F9 522 aa16.13■□□□□ 0.17
COL17A1-202ENST00000369733 LOC100506127A0A0U1RQW1 187 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 ANXA6P08133 673 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 GMPSP49915 693 aaPredicted RBP16.12■□□□□ 0.17
COL17A1-202ENST00000369733 MFSD14CQ5VZR4 134 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 LZTR1Q8N653 840 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 FAM84AQ96KN4 292 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 NUAK2Q9H093 628 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 HDHD2Q9H0R4 259 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 POPDC2Q9HBU9 364 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 TALDO1P37837 337 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 ACSBG2Q5FVE4 666 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 DGKKQ5KSL6 1271 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 CCDC80Q76M96 950 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 KRT73Q86Y46 540 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 IDI2Q9BXS1 227 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 DYTNA2CJ06 578 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 PEX11AO75192 247 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 HNRNPLP14866 589 aaKnown RBP eCLIP16.12■□□□□ 0.17
COL17A1-202ENST00000369733 SCNN1BP51168 640 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 RNASEH2BQ5TBB1 312 aaKnown RBP16.12■□□□□ 0.17
COL17A1-202ENST00000369733 TLK2Q86UE8 772 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 PTGR2Q8N8N7 351 aaPredicted RBP16.12■□□□□ 0.17
COL17A1-202ENST00000369733 JOSD2Q8TAC2 188 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 TRAPPC12Q8WVT3 735 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 FBXO32Q969P5 355 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 ADGRE3Q9BY15 652 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 EHD3Q9NZN3 535 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 BCL9O00512 1426 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 RIMS1Q86UR5 1692 aaKnown RBP16.12■□□□□ 0.17
COL17A1-202ENST00000369733 TIPRLO75663 272 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 SERPINF2P08697 491 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 C4BPBP20851 252 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 SLC7A2P52569 658 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 PURAQ00577 322 aaKnown RBP16.12■□□□□ 0.17
COL17A1-202ENST00000369733 DSELQ8IZU8 1212 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 C10orf82Q8WW14 230 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 LEF1Q9UJU2 399 aaPredicted RBP16.12■□□□□ 0.17
COL17A1-202ENST00000369733 INSRRP14616 1297 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 SPATA6LQ8N4H0 392 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 ZNF317Q96PQ6 595 aaPredicted RBP16.12■□□□□ 0.17
COL17A1-202ENST00000369733 LGMNQ99538 433 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 TKTL2Q9H0I9 626 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 KLHL20Q9Y2M5 609 aa16.12■□□□□ 0.17
COL17A1-202ENST00000369733 CNTNAP2Q9UHC6 1331 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 TRAFD1O14545 582 aaPredicted RBP16.11■□□□□ 0.17
COL17A1-202ENST00000369733 ALOX15P16050 662 aaPredicted RBP16.11■□□□□ 0.17
COL17A1-202ENST00000369733 NFKB1P19838 968 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 MPSTP25325 297 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 AQP4P55087 323 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 USP46P62068 366 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 CDH18Q13634 790 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 NOMO1Q15155 1222 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 TSNQ15631 228 aaKnown RBP16.11■□□□□ 0.17
COL17A1-202ENST00000369733 SPESP1Q6UW49 350 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 C11orf96Q7Z7L8 435 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 LPCAT1Q8NF37 534 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 GPRC5AQ8NFJ5 357 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 BTBD9Q96Q07 612 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 CAB39LQ9H9S4 337 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 EGFL7Q9UHF1 273 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 ASS1P00966 412 aaKnown RBP16.11■□□□□ 0.17
COL17A1-202ENST00000369733 ITGB6P18564 788 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 FMO4P31512 558 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 TNFSF9P41273 254 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 DDX53Q86TM3 631 aaKnown RBP16.11■□□□□ 0.17
COL17A1-202ENST00000369733 SAPCD2Q86UD0 394 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 HERC6Q8IVU3 1022 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 FLCNQ8NFG4 579 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 NKD2Q969F2 451 aaPredicted RBP16.11■□□□□ 0.17
COL17A1-202ENST00000369733 EPB41L1Q9H4G0 881 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 LNPEPQ9UIQ6 1025 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 EFCAB10A6NFE3 127 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 HOXB8P17481 243 aaPredicted RBP16.11■□□□□ 0.17
COL17A1-202ENST00000369733 TSPAN8P19075 237 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 SERPINH1P50454 418 aaKnown RBP16.11■□□□□ 0.17
COL17A1-202ENST00000369733 HADHBP55084 474 aaKnown RBP16.11■□□□□ 0.17
COL17A1-202ENST00000369733 PTP4A2Q12974 167 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 PAN2Q504Q3 1202 aaKnown RBP16.11■□□□□ 0.17
COL17A1-202ENST00000369733 ANKRD22Q5VYY1 191 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 MON1BQ7L1V2 547 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 NT5DC4Q86YG4 428 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 SETD4Q9NVD3 440 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 ADPRHL2Q9NX46 363 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 C3orf18Q9UK00 162 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 TIMM13Q9Y5L4 95 aaPredicted RBP16.11■□□□□ 0.17
COL17A1-202ENST00000369733 RGS14O43566 566 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 RECQL5O94762 991 aaPredicted RBP16.11■□□□□ 0.17
COL17A1-202ENST00000369733 KLHL17Q6TDP4 642 aa16.11■□□□□ 0.17
COL17A1-202ENST00000369733 GK5Q6ZS86 529 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms