RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 CA8P35219 290 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 BCAP31P51572 246 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 ATP6V0D1P61421 351 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 TNK2Q07912 1038 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 WSCD1Q658N2 575 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 C1orf228Q6PIY5 440 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 UGT2A3Q6UWM9 527 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 C12orf76Q8N812 135 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-204ENST00000369530 CHPT1Q8WUD6 406 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 SHC3Q92529 594 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 MAGEB18Q96M61 343 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 TCF12Q99081 682 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 PHOX2BQ99453 314 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 TUBB6Q9BUF5 446 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 SLC4A5Q9BY07 1137 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 LRRC4CQ9HCJ2 640 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 SALL4Q9UJQ4 1053 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 ARHGAP26Q9UNA1 814 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 CCL26Q9Y258 94 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 MTF2Q9Y483 593 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-204ENST00000369530 OR51B4Q9Y5P0 310 aa7.03□□□□□ -1.28
CSDE1-204ENST00000369530 SSU72P8A0A1W2PR75 194 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 NDC80O14777 642 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 EPHB6O15197 1021 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 MAGEB3O15480 346 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 CFHP08603 1231 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 SLC9A1P19634 815 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 PSMC2P35998 433 aaKnown RBP7.02□□□□□ -1.29
CSDE1-204ENST00000369530 KIF11P52732 1056 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 AAK1Q2M2I8 961 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 KRT71Q3SY84 523 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 LRRC8BQ6P9F7 803 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 PDSS2Q86YH6 399 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 PPFIBP2Q8ND30 876 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 TFAP2BQ92481 460 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 EMILIN2Q9BXX0 1053 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 MYLK2Q9H1R3 596 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 CYP3A43Q9HB55 503 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 POLIQ9UNA4 740 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 THADAQ6YHU6 1953 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 FAM25EA8MYX2 175 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 ZNF701M0R085 212 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-204ENST00000369530 HOXC11O43248 304 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-204ENST00000369530 PEX1O43933 1283 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 DCTN3O75935 186 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 DLATP10515 647 aaKnown RBP7.02□□□□□ -1.29
CSDE1-204ENST00000369530 OPRD1P41143 372 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 MYL6P60660 151 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 GFPT1Q06210 699 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-204ENST00000369530 ZBTB17Q13105 803 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 TRADDQ15628 312 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 TANGO2Q6ICL3 276 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 HTR3DQ70Z44 454 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 ANGPTL6Q8NI99 470 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 TAS1R2Q8TE23 839 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 BAP1Q92560 729 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 BTBD9Q96Q07 612 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 FAM213AQ9BRX8 229 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 ZNF696Q9H7X3 374 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.02□□□□□ -1.29
CSDE1-204ENST00000369530 FKBP14Q9NWM8 211 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 ANGPTL2Q9UKU9 493 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 B3GNT3Q9Y2A9 372 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 ACTL7BQ9Y614 415 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 ESYT3A0FGR9 886 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 KCNU1A8MYU2 1149 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 M0R296 226 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 DCXO43602 365 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 ITGB3P05106 788 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 TFAP2AP05549 437 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 HOXC13P31276 330 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 GPD2P43304 727 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 HNRNPFP52597 415 aaKnown RBP7.02□□□□□ -1.29
CSDE1-204ENST00000369530 NTHL1P78549 312 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 SURF1Q15526 300 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 TRIP4Q15650 581 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-204ENST00000369530 HSP90AA5PQ58FG0 334 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 ODF2Q5BJF6 829 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 ACSBG2Q5FVE4 666 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 NDUFAF5Q5TEU4 345 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 TMCO4Q5TGY1 634 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 FAM171A1Q5VUB5 890 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 BTBD8Q5XKL5 378 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 VSTM1Q6UX27 236 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 DBX2Q6ZNG2 339 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 CYP2U1Q7Z449 544 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 FAM71AQ8IYT1 594 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 MARVELD2Q8N4S9 558 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 C1orf216Q8TAB5 229 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 SPPL2BQ8TCT7 592 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 RSAD2Q8WXG1 361 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 PTCD3Q96EY7 689 aaKnown RBP7.02□□□□□ -1.29
CSDE1-204ENST00000369530 TMEM121BQ9BXQ6 578 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-204ENST00000369530 CHKBQ9Y259 395 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 NR2E1Q9Y466 385 aa7.02□□□□□ -1.29
CSDE1-204ENST00000369530 IGLV3-10A0A075B6K4 115 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 HNRNPDLO14979 420 aaKnown RBP7.01□□□□□ -1.29
CSDE1-204ENST00000369530 GLUD1P00367 558 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 M6PRP20645 277 aa7.01□□□□□ -1.29
CSDE1-204ENST00000369530 POLR2BP30876 1174 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms