RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 ELAVL3Q14576 367 aaKnown RBP15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 PDK2Q15119 407 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 DNTTIP2Q5QJE6 756 aaKnown RBP15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 NCBP2-AS2Q69YL0 99 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 DAAM2Q86T65 1068 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 RHOT1Q8IXI2 618 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 CHST14Q8NCH0 376 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 FAF2Q96CS3 445 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 SPACA7Q96KW9 195 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 C16orf45Q96MC5 204 aaPredicted RBP15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 TM6SF2Q9BZW4 377 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 SEMA4AQ9H3S1 761 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 DONSONQ9NYP3 566 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 SERGEFQ9UGK8 458 aa15.37■□□□□ 0.05
SMPDL3A-201ENST00000368440 ARHGAP42A6NI28 874 aa15.36■□□□□ 0.05
SMPDL3A-201ENST00000368440 MFSD11O43934 449 aa15.36■□□□□ 0.05
SMPDL3A-201ENST00000368440 ZNF217O75362 1048 aa15.36■□□□□ 0.05
SMPDL3A-201ENST00000368440 TMCC1O94876 653 aa15.36■□□□□ 0.05
SMPDL3A-201ENST00000368440 DNTTP04053 509 aa15.36■□□□□ 0.05
SMPDL3A-201ENST00000368440 CTSLP07711 333 aa15.36■□□□□ 0.05
SMPDL3A-201ENST00000368440 ACADMP11310 421 aa15.36■□□□□ 0.05
SMPDL3A-201ENST00000368440 NAP1L1P55209 391 aaKnown RBP15.36■□□□□ 0.05
SMPDL3A-201ENST00000368440 CST6Q15828 149 aa15.36■□□□□ 0.05
SMPDL3A-201ENST00000368440 LRRC38Q5VT99 294 aa15.36■□□□□ 0.05
SMPDL3A-201ENST00000368440 FAM124AQ86V42 546 aa15.36■□□□□ 0.05
SMPDL3A-201ENST00000368440 PQLC3Q8N755 202 aa15.36■□□□□ 0.05
SMPDL3A-201ENST00000368440 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 CXorf51AA0A1B0GTR3 108 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 MACROD2A1Z1Q3 448 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 GRID2IPA4D2P6 1211 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 MCF2LO15068 1137 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 PRAMEF11O60813 436 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 MAP3K6O95382 1288 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 IL1BP01584 269 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 DNA2P51530 1060 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 POM121L1PQ3SYA9 428 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 PMS2CLQ68D20 193 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 DPY19L3Q6ZPD9 716 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 TMEFF1Q8IYR6 380 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 AADATQ8N5Z0 425 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 LZTR1Q8N653 840 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 DEFB119Q8N690 84 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 PCDH20Q8N6Y1 951 aaKnown RBP15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 OR8D1Q8WZ84 308 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 KRT35Q92764 455 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 RNF25Q96BH1 459 aaPredicted RBP15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 ZC3H10Q96K80 434 aaKnown RBP15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 CEP44Q9C0F1 390 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 PABPC3Q9H361 631 aaKnown RBP15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 WDR87Q6ZQQ6 2873 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 ZSCAN5CA6NGD5 496 aaPredicted RBP15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 PLK4O00444 970 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 PSTPIP1O43586 416 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 RNASEH1O60930 286 aaKnown RBP15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 IGLV3-19P01714 112 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 SLC8A1P32418 973 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 GEMIN4P57678 1058 aaKnown RBP15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 KIF5AQ12840 1032 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 BYSLQ13895 437 aaKnown RBP15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 ATXN7L2Q5T6C5 722 aaPredicted RBP15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 MAP7D3Q8IWC1 876 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 LRRC57Q8N9N7 239 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 VOPP1Q96AW1 172 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 TOE1Q96GM8 510 aaKnown RBP15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 WSB2Q9NYS7 404 aaPredicted RBP15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 UBA2Q9UBT2 640 aaPredicted RBP15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 PPP2R2CQ9Y2T4 447 aa15.35■□□□□ 0.05
SMPDL3A-201ENST00000368440 NUMA1Q14980 2115 aa15.34■□□□□ 0.05
SMPDL3A-201ENST00000368440 A0A1W2PP55 124 aa15.34■□□□□ 0.05
SMPDL3A-201ENST00000368440 MAP3K13O43283 966 aa15.34■□□□□ 0.05
SMPDL3A-201ENST00000368440 CD6P30203 668 aa15.34■□□□□ 0.05
SMPDL3A-201ENST00000368440 GKP32189 559 aa15.34■□□□□ 0.05
SMPDL3A-201ENST00000368440 CHRNA3P32297 505 aa15.34■□□□□ 0.05
SMPDL3A-201ENST00000368440 ACSL1P33121 698 aa15.34■□□□□ 0.05
SMPDL3A-201ENST00000368440 CCNHP51946 323 aaPredicted RBP15.34■□□□□ 0.05
SMPDL3A-201ENST00000368440 RPL6Q02878 288 aaKnown RBP15.34■□□□□ 0.05
SMPDL3A-201ENST00000368440 ZBTB16Q05516 673 aa15.34■□□□□ 0.05
SMPDL3A-201ENST00000368440 PAFAH1B3Q15102 231 aaKnown RBP15.34■□□□□ 0.05
SMPDL3A-201ENST00000368440 CYTH1Q15438 398 aa15.34■□□□□ 0.05
SMPDL3A-201ENST00000368440 CARD16Q5EG05 197 aa15.34■□□□□ 0.05
SMPDL3A-201ENST00000368440 MFSD7Q6UXD7 560 aa15.34■□□□□ 0.05
SMPDL3A-201ENST00000368440 ARMCX6Q7L4S7 300 aa15.34■□□□□ 0.05
SMPDL3A-201ENST00000368440 OR6K2Q8NGY2 324 aa15.34■□□□□ 0.05
SMPDL3A-201ENST00000368440 PIP4K2CQ8TBX8 421 aa15.34■□□□□ 0.05
SMPDL3A-201ENST00000368440 GRIN3AQ8TCU5 1115 aa15.34■□□□□ 0.05
SMPDL3A-201ENST00000368440 ISG20Q96AZ6 181 aaKnown RBP15.34■□□□□ 0.05
SMPDL3A-201ENST00000368440 RNF157Q96PX1 679 aa15.34■□□□□ 0.05
SMPDL3A-201ENST00000368440 SP110Q9HB58 689 aa15.34■□□□□ 0.05
SMPDL3A-201ENST00000368440 DDX56Q9NY93 547 aaKnown RBP15.34■□□□□ 0.05
SMPDL3A-201ENST00000368440 LHX3Q9UBR4 397 aa15.34■□□□□ 0.05
SMPDL3A-201ENST00000368440 IPO11Q9UI26 975 aaKnown RBP15.34■□□□□ 0.05
SMPDL3A-201ENST00000368440 RAB23Q9ULC3 237 aa15.34■□□□□ 0.05
SMPDL3A-201ENST00000368440 PPM1HQ9ULR3 514 aa15.34■□□□□ 0.05
SMPDL3A-201ENST00000368440 WASF2Q9Y6W5 498 aa15.34■□□□□ 0.05
SMPDL3A-201ENST00000368440 ALOX15BO15296 676 aa15.33■□□□□ 0.05
SMPDL3A-201ENST00000368440 GFRA3O60609 400 aa15.33■□□□□ 0.05
SMPDL3A-201ENST00000368440 SERPINB6P35237 376 aa15.33■□□□□ 0.05
SMPDL3A-201ENST00000368440 DRD3P35462 400 aa15.33■□□□□ 0.05
SMPDL3A-201ENST00000368440 PTGER3P43115 390 aa15.33■□□□□ 0.05
SMPDL3A-201ENST00000368440 GBE1Q04446 702 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms