RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 ATP13A1Q9HD20 1204 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 TRPM5Q9NZQ8 1165 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 POLG2Q9UHN1 485 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 MYRFQ9Y2G1 1151 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 SMIM28A0A1B0GU29 152 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 CLOCKO15516 846 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 PGM3O95394 542 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 TSPAN8P19075 237 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 TFEBP19484 476 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 MPSTP25325 297 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 ECHS1P30084 290 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 PFKFB4Q16877 469 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 DPEP3Q9H4B8 488 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 CNGB3Q9NQW8 809 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 ACSS2Q9NR19 701 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 CHCHD3Q9NX63 227 aaKnown RBP11.84□□□□□ -0.51
COPA-202ENST00000368069 PRKAG2Q9UGJ0 569 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 FBXO5Q9UKT4 447 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 FAM50BQ9Y247 325 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 PEX1O43933 1283 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 KDM1AO60341 852 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 SYNCRIPO60506 623 aaKnown RBP11.84□□□□□ -0.51
COPA-202ENST00000368069 MSCO60682 206 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 GUCA1CO95843 209 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 NOVP48745 357 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 CLCN5P51795 746 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 CCNG1P51959 295 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 LRRC74AQ0VAA2 488 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 CA9Q16790 459 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 FAM182AQ5T1J6 154 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 TRMT10BQ6PF06 316 aaKnown RBP11.84□□□□□ -0.51
COPA-202ENST00000368069 GLT6D1Q7Z4J2 308 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 P3H2Q8IVL5 708 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 TMEM192Q8IY95 271 aa11.84□□□□□ -0.51
COPA-202ENST00000368069 MRPL57Q9BQC6 102 aaKnown RBP11.84□□□□□ -0.51
COPA-202ENST00000368069 SEMA4BQ9NPR2 832 aaPredicted RBP11.84□□□□□ -0.51
COPA-202ENST00000368069 RCOR3Q9P2K3 495 aaPredicted RBP11.84□□□□□ -0.51
COPA-202ENST00000368069 ZSCAN9O15535 394 aaPredicted RBP11.83□□□□□ -0.52
COPA-202ENST00000368069 GCATO75600 419 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 CABYRO75952 493 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 SLC2A4P14672 509 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 GSTT1P30711 240 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 PTPN9P43378 593 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 KPNA1P52294 538 aaPredicted RBP11.83□□□□□ -0.52
COPA-202ENST00000368069 OGDHQ02218 1023 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 SQLEQ14534 574 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 SLC10A6Q3KNW5 377 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 FAM171A1Q5VUB5 890 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 DDX53Q86TM3 631 aaKnown RBP11.83□□□□□ -0.52
COPA-202ENST00000368069 TTC7BQ86TV6 843 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 PTGR2Q8N8N7 351 aaPredicted RBP11.83□□□□□ -0.52
COPA-202ENST00000368069 VPS37AQ8NEZ2 397 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 MCRS1Q96EZ8 462 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 ADAM2Q99965 735 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 SLC4A5Q9BY07 1137 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 POLR1EQ9GZS1 481 aaKnown RBP11.83□□□□□ -0.52
COPA-202ENST00000368069 ARHGEF4Q9NR80 690 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 FETUBQ9UGM5 382 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 COL1A2P08123 1366 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 ALS2Q96Q42 1657 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 CCDC154A6NI56 674 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 C5orf58C9J3I9 102 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 CLK1P49759 484 aaKnown RBP11.83□□□□□ -0.52
COPA-202ENST00000368069 NUP107P57740 925 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 SP2Q02086 613 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 KLF10Q13118 480 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 INSCQ1MX18 579 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 VWA5B1Q5TIE3 1220 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 RFWD3Q6PCD5 774 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 MARK2Q7KZI7 788 aaKnown RBP11.83□□□□□ -0.52
COPA-202ENST00000368069 GPR142Q7Z601 462 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 OR56A4Q8NGH8 313 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 PTCH2Q9Y6C5 1203 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 CCNT2O60583 730 aaKnown RBP11.83□□□□□ -0.52
COPA-202ENST00000368069 LDLRP01130 860 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 SNRPB2P08579 225 aaKnown RBP11.83□□□□□ -0.52
COPA-202ENST00000368069 CSH1P0DML2 217 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 CSH2P0DML3 217 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 TRAF2Q12933 501 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 LPCAT4Q643R3 524 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 METTL6Q8TCB7 284 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 OSCP1Q8WVF1 389 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 SEC14L1Q92503 715 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 FIG4Q92562 907 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 ASB2Q96Q27 587 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 NR1H4Q96RI1 486 aaPredicted RBP11.83□□□□□ -0.52
COPA-202ENST00000368069 FZD8Q9H461 694 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 RHOJQ9H4E5 214 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 ZNF556Q9HAH1 456 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 CATSPERZQ9NTU4 200 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 IPPQ9Y573 584 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 PHLPP1O60346 1717 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 PKD1L3Q7Z443 1732 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 SPDYE5A6NIY4 337 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 TRIM38O00635 465 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 LIN7AO14910 233 aaPredicted RBP11.83□□□□□ -0.52
COPA-202ENST00000368069 MAGEC1O60732 1142 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 SIN3BO75182 1162 aa11.83□□□□□ -0.52
COPA-202ENST00000368069 MSX2P35548 267 aaPredicted RBP11.83□□□□□ -0.52
COPA-202ENST00000368069 GPD2P43304 727 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms