RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 GOLGA8OA6NCC3 632 aa14.52□□□□□ -0.09
CD48-201ENST00000368045 GOLGA8NF8WBI6 632 aa14.52□□□□□ -0.09
CD48-201ENST00000368045 UQCRBP14927 111 aa14.52□□□□□ -0.09
CD48-201ENST00000368045 MPSTP25325 297 aa14.52□□□□□ -0.09
CD48-201ENST00000368045 RPL9P32969 192 aaKnown RBP14.52□□□□□ -0.09
CD48-201ENST00000368045 SERPINB5P36952 375 aa14.52□□□□□ -0.09
CD48-201ENST00000368045 PPARGP37231 505 aaPredicted RBP14.52□□□□□ -0.09
CD48-201ENST00000368045 GRIA4P48058 902 aa14.52□□□□□ -0.09
CD48-201ENST00000368045 KPNA2P52292 529 aaKnown RBP14.52□□□□□ -0.09
CD48-201ENST00000368045 SLC30A9Q6PML9 568 aa14.52□□□□□ -0.09
CD48-201ENST00000368045 HPS6Q86YV9 775 aa14.52□□□□□ -0.09
CD48-201ENST00000368045 TMEM151AQ8N4L1 468 aa14.52□□□□□ -0.09
CD48-201ENST00000368045 LZTR1Q8N653 840 aa14.52□□□□□ -0.09
CD48-201ENST00000368045 KYQ8NBH2 561 aa14.52□□□□□ -0.09
CD48-201ENST00000368045 FCRL5Q96RD9 977 aa14.52□□□□□ -0.09
CD48-201ENST00000368045 TBL1YQ9BQ87 522 aa14.52□□□□□ -0.09
CD48-201ENST00000368045 ZNF385DQ9H6B1 395 aa14.52□□□□□ -0.09
CD48-201ENST00000368045 ADAMTS6Q9UKP5 1117 aa14.52□□□□□ -0.09
CD48-201ENST00000368045 Q9Y3F1 56 aa14.52□□□□□ -0.09
CD48-201ENST00000368045 UPP2O95045 317 aa14.51□□□□□ -0.09
CD48-201ENST00000368045 AMHP03971 560 aa14.51□□□□□ -0.09
CD48-201ENST00000368045 UBTFL6P0CB48 400 aaPredicted RBP14.51□□□□□ -0.09
CD48-201ENST00000368045 CLCN2P51788 898 aa14.51□□□□□ -0.09
CD48-201ENST00000368045 MED21Q13503 144 aa14.51□□□□□ -0.09
CD48-201ENST00000368045 RNF220Q5VTB9 566 aa14.51□□□□□ -0.09
CD48-201ENST00000368045 NAIF1Q69YI7 327 aaPredicted RBP14.51□□□□□ -0.09
CD48-201ENST00000368045 ZFP1Q6P2D0 407 aa14.51□□□□□ -0.09
CD48-201ENST00000368045 POTEHQ6S545 545 aa14.51□□□□□ -0.09
CD48-201ENST00000368045 RNF111Q6ZNA4 994 aa14.51□□□□□ -0.09
CD48-201ENST00000368045 ST13P4Q8IZP2 240 aaPredicted RBP14.51□□□□□ -0.09
CD48-201ENST00000368045 GALNT15Q8N3T1 639 aa14.51□□□□□ -0.09
CD48-201ENST00000368045 CCDC124Q96CT7 223 aaKnown RBP14.51□□□□□ -0.09
CD48-201ENST00000368045 ZFP42Q96MM3 310 aa14.51□□□□□ -0.09
CD48-201ENST00000368045 PGLYRP2Q96PD5 576 aa14.51□□□□□ -0.09
CD48-201ENST00000368045 APOL2Q9BQE5 337 aa14.51□□□□□ -0.09
CD48-201ENST00000368045 SHCBP1LQ9BZQ2 653 aa14.51□□□□□ -0.09
CD48-201ENST00000368045 UBE2OQ9C0C9 1292 aaKnown RBP14.51□□□□□ -0.09
CD48-201ENST00000368045 MAN1C1Q9NR34 630 aa14.51□□□□□ -0.09
CD48-201ENST00000368045 PAPOLBQ9NRJ5 636 aaKnown RBP14.51□□□□□ -0.09
CD48-201ENST00000368045 CPSF2Q9P2I0 782 aaKnown RBP14.51□□□□□ -0.09
CD48-201ENST00000368045 CDYLQ9Y232 598 aa14.51□□□□□ -0.09
CD48-201ENST00000368045 ACOT9Q9Y305 439 aa14.51□□□□□ -0.09
CD48-201ENST00000368045 COL4A4P53420 1690 aaPredicted RBP14.51□□□□□ -0.09
CD48-201ENST00000368045 TARM1B6A8C7 271 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 H3BNX3 289 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 FGF10O15520 208 aaPredicted RBP14.5□□□□□ -0.09
CD48-201ENST00000368045 GRID2O43424 1007 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 NPHS1O60500 1241 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 PIGNO95427 931 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 THP07101 528 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 CHRNGP07510 517 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 SBK3P0C264 359 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 SLC35E2BP0CK96 405 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 RAG1P15918 1043 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 TPH1P17752 444 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 TFEBP19484 476 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 HOXC13P31276 330 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 ABCG1P45844 678 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 PAPOLAP51003 745 aaKnown RBP14.5□□□□□ -0.09
CD48-201ENST00000368045 GEMP55040 296 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 RAB10P61026 200 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 CYLC2Q14093 348 aaPredicted RBP14.5□□□□□ -0.09
CD48-201ENST00000368045 LSM12Q3MHD2 195 aaKnown RBP14.5□□□□□ -0.09
CD48-201ENST00000368045 ARL13AQ5H913 290 aaPredicted RBP14.5□□□□□ -0.09
CD48-201ENST00000368045 BRMS1LQ5PSV4 323 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 SH2D4BQ5SQS7 431 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 OGFRL1Q5TC84 451 aaPredicted RBP14.5□□□□□ -0.09
CD48-201ENST00000368045 LRRC8EQ6NSJ5 796 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 TAF2Q6P1X5 1199 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 TMC7Q7Z402 723 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 TAC4Q86UU9 113 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 MFN1Q8IWA4 741 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 CNTD1Q8N815 330 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 ACVR1CQ8NER5 493 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 PPHLN1Q8NEY8 458 aaKnown RBP14.5□□□□□ -0.09
CD48-201ENST00000368045 SHKBP1Q8TBC3 707 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 SCYL1Q96KG9 808 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 APBA2Q99767 749 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 AP5M1Q9H0R1 490 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 EBF3Q9H4W6 596 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 GLOD4Q9HC38 313 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.5□□□□□ -0.09
CD48-201ENST00000368045 PSMD13Q9UNM6 376 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 RUVBL2Q9Y230 463 aaKnown RBP14.5□□□□□ -0.09
CD48-201ENST00000368045 A0A087X1B8 175 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 ENO4A6NNW6 628 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 TK2O00142 265 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 IGLV3-25P01717 112 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 MYL3P08590 195 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 PAMP19021 973 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 PAX3P23760 479 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 ERFP50548 548 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 NUDT2P50583 147 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 DNAJB13P59910 316 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 ROR2Q01974 943 aaKnown RBP14.5□□□□□ -0.09
CD48-201ENST00000368045 GRM2Q14416 872 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 RFTN1Q14699 578 aaPredicted RBP14.5□□□□□ -0.09
CD48-201ENST00000368045 TRIP10Q15642 601 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 C9orf131Q5VYM1 1079 aa14.5□□□□□ -0.09
CD48-201ENST00000368045 OLFML2BQ68BL8 750 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 494.6 ms