RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 KRT6AP02538 564 aa7.4□□□□□ -1.22
VTA1-202ENST00000367630 KRT6BP04259 564 aa7.4□□□□□ -1.22
VTA1-202ENST00000367630 SERPINF2P08697 491 aa7.4□□□□□ -1.22
VTA1-202ENST00000367630 KRT6CP48668 564 aa7.4□□□□□ -1.22
VTA1-202ENST00000367630 MARC1Q5VT66 337 aa7.4□□□□□ -1.22
VTA1-202ENST00000367630 C16orf87Q6PH81 154 aa7.4□□□□□ -1.22
VTA1-202ENST00000367630 TMC7Q7Z402 723 aa7.4□□□□□ -1.22
VTA1-202ENST00000367630 DEFB107AQ8IZN7 70 aa7.4□□□□□ -1.22
VTA1-202ENST00000367630 CARNMT1Q8N4J0 409 aa7.4□□□□□ -1.22
VTA1-202ENST00000367630 GLB1L3Q8NCI6 653 aaPredicted RBP7.4□□□□□ -1.22
VTA1-202ENST00000367630 B3GALNT2Q8NCR0 500 aa7.4□□□□□ -1.22
VTA1-202ENST00000367630 SKA1Q96BD8 255 aa7.4□□□□□ -1.22
VTA1-202ENST00000367630 PPP1R10Q96QC0 940 aaKnown RBP7.4□□□□□ -1.22
VTA1-202ENST00000367630 FCRL5Q96RD9 977 aa7.4□□□□□ -1.22
VTA1-202ENST00000367630 FDXACB1Q9BRP7 624 aaPredicted RBP7.4□□□□□ -1.22
VTA1-202ENST00000367630 RACGAP1Q9H0H5 632 aa7.4□□□□□ -1.22
VTA1-202ENST00000367630 IARS2Q9NSE4 1012 aaKnown RBP7.4□□□□□ -1.22
VTA1-202ENST00000367630 DNAAF2Q9NVR5 837 aaKnown RBP7.4□□□□□ -1.22
VTA1-202ENST00000367630 SCHIP1Q9P0W5 487 aaPredicted RBP7.4□□□□□ -1.22
VTA1-202ENST00000367630 FAM95CA0A1B0GW59 222 aa7.4□□□□□ -1.22
VTA1-202ENST00000367630 VGLL3A8MV65 326 aa7.4□□□□□ -1.22
VTA1-202ENST00000367630 RGS14O43566 566 aa7.4□□□□□ -1.22
VTA1-202ENST00000367630 ALDH1A2O94788 518 aa7.4□□□□□ -1.22
VTA1-202ENST00000367630 SRPRAP08240 638 aaKnown RBP7.4□□□□□ -1.22
VTA1-202ENST00000367630 XPAP23025 273 aaPredicted RBP7.4□□□□□ -1.22
VTA1-202ENST00000367630 FASTKQ14296 549 aaKnown RBP7.4□□□□□ -1.22
VTA1-202ENST00000367630 CLYBLQ8N0X4 340 aa7.4□□□□□ -1.22
VTA1-202ENST00000367630 FITM2Q8N6M3 262 aa7.4□□□□□ -1.22
VTA1-202ENST00000367630 DDHD1Q8NEL9 900 aa7.4□□□□□ -1.22
VTA1-202ENST00000367630 OVCA2Q8WZ82 227 aa7.4□□□□□ -1.22
VTA1-202ENST00000367630 NDEL1Q9GZM8 345 aa7.4□□□□□ -1.22
VTA1-202ENST00000367630 SYN3O14994 580 aa7.4□□□□□ -1.23
VTA1-202ENST00000367630 RGS7P49802 495 aa7.4□□□□□ -1.23
VTA1-202ENST00000367630 TIMM50Q3ZCQ8 353 aa7.4□□□□□ -1.23
VTA1-202ENST00000367630 CERS6Q6ZMG9 384 aa7.4□□□□□ -1.23
VTA1-202ENST00000367630 DEFB106AQ8N104 65 aa7.4□□□□□ -1.23
VTA1-202ENST00000367630 PQLC1Q8N2U9 271 aa7.4□□□□□ -1.23
VTA1-202ENST00000367630 ATL1Q8WXF7 558 aa7.4□□□□□ -1.23
VTA1-202ENST00000367630 THAP11Q96EK4 314 aa7.4□□□□□ -1.23
VTA1-202ENST00000367630 CSPG4P5Q96PW8 444 aa7.4□□□□□ -1.23
VTA1-202ENST00000367630 APOL4Q9BPW4 351 aa7.4□□□□□ -1.23
VTA1-202ENST00000367630 SH2D3AQ9BRG2 576 aa7.4□□□□□ -1.23
VTA1-202ENST00000367630 WDR41Q9HAD4 459 aa7.4□□□□□ -1.23
VTA1-202ENST00000367630 NUDT4Q9NZJ9 180 aa7.4□□□□□ -1.23
VTA1-202ENST00000367630 GINS2Q9Y248 185 aa7.4□□□□□ -1.23
VTA1-202ENST00000367630 GREB1LQ9C091 1923 aaPredicted RBP7.4□□□□□ -1.23
VTA1-202ENST00000367630 ZNF701M0R085 212 aaPredicted RBP7.4□□□□□ -1.23
VTA1-202ENST00000367630 DNM1LO00429 736 aa7.4□□□□□ -1.23
VTA1-202ENST00000367630 AKAP10O43572 662 aa7.4□□□□□ -1.23
VTA1-202ENST00000367630 MGAT1P26572 445 aa7.4□□□□□ -1.23
VTA1-202ENST00000367630 TEX44Q53QW1 395 aa7.4□□□□□ -1.23
VTA1-202ENST00000367630 ACBD6Q9BR61 282 aa7.4□□□□□ -1.23
VTA1-202ENST00000367630 DENND2DQ9H6A0 471 aaPredicted RBP7.4□□□□□ -1.23
VTA1-202ENST00000367630 ATXN10Q9UBB4 475 aa7.4□□□□□ -1.23
VTA1-202ENST00000367630 PAIP2BQ9ULR5 123 aaKnown RBP7.4□□□□□ -1.23
VTA1-202ENST00000367630 PNMA8CA0A1B0GUJ8 204 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 ATP9BO43861 1147 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 SH3BP5O60239 455 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 RHOBTB1O94844 696 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 RHOQP17081 205 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 NRG1Q02297 640 aaPredicted RBP7.39□□□□□ -1.23
VTA1-202ENST00000367630 VARS2Q5ST30 1063 aaKnown RBP7.39□□□□□ -1.23
VTA1-202ENST00000367630 RIPOR1Q6ZS17 1223 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 KAT5Q92993 513 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 UBE2E3Q969T4 207 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 RNF112Q9ULX5 631 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 GMEB1Q9Y692 573 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 LDLRP01130 860 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 ENO3P13929 434 aaPredicted RBP7.39□□□□□ -1.23
VTA1-202ENST00000367630 TUFMP49411 452 aaKnown RBP7.39□□□□□ -1.23
VTA1-202ENST00000367630 MRPS6P82932 125 aaKnown RBP7.39□□□□□ -1.23
VTA1-202ENST00000367630 ABRQ12979 859 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 NUDT18Q6ZVK8 323 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 ARHGAP22Q7Z5H3 698 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 ADAMTSL2Q86TH1 951 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 DDIASQ8IXT1 998 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 RNF169Q8NCN4 708 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 IL31RAQ8NI17 732 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 EZH1Q92800 747 aaPredicted RBP7.39□□□□□ -1.23
VTA1-202ENST00000367630 PGAP3Q96FM1 320 aaPredicted RBP7.39□□□□□ -1.23
VTA1-202ENST00000367630 AAASQ9NRG9 546 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 SNX15Q9NRS6 342 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 TBCCD1Q9NVR7 557 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 RPS6KA6Q9UK32 745 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 GOLGA8RI6L899 631 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 PSMD12O00232 456 aaPredicted RBP7.39□□□□□ -1.23
VTA1-202ENST00000367630 PRMT5O14744 637 aaPredicted RBP7.39□□□□□ -1.23
VTA1-202ENST00000367630 MRASO14807 208 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 SMNDC1O75940 238 aaKnown RBP eCLIP7.39□□□□□ -1.23
VTA1-202ENST00000367630 ASGR1P07306 291 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 ANXA6P08133 673 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 DHRS4L1P0CG22 281 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 DARSP14868 501 aaKnown RBP7.39□□□□□ -1.23
VTA1-202ENST00000367630 RAG1P15918 1043 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 ZNF7P17097 686 aaPredicted RBP7.39□□□□□ -1.23
VTA1-202ENST00000367630 IL12AP29459 219 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 MYBPC3Q14896 1274 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 CWF19L1Q69YN2 538 aaKnown RBP7.39□□□□□ -1.23
VTA1-202ENST00000367630 ZNF783Q6ZMS7 281 aa7.39□□□□□ -1.23
VTA1-202ENST00000367630 ADHFE1Q8IWW8 467 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms