RNA–Protein interactions for RNA: ENST00000367364.5

PTPRC-202, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-202ENST00000367364 CUX1P39880 1505 aa4.11□□□□□ -1.75
PTPRC-202ENST00000367364 KDM5CP41229 1560 aa4.11□□□□□ -1.75
PTPRC-202ENST00000367364 LOC105369274A0A096LPK9 316 aa4.11□□□□□ -1.75
PTPRC-202ENST00000367364 LOC102723532A0A0G2JNH3 316 aa4.11□□□□□ -1.75
PTPRC-202ENST00000367364 A0A0U1RQJ8 604 aa4.11□□□□□ -1.75
PTPRC-202ENST00000367364 FAM172BPA6NC97 362 aa4.11□□□□□ -1.75
PTPRC-202ENST00000367364 MYZAPP0CAP1 466 aa4.11□□□□□ -1.75
PTPRC-202ENST00000367364 FGF5P12034 268 aa4.11□□□□□ -1.75
PTPRC-202ENST00000367364 FAM193AP78312 1265 aa4.11□□□□□ -1.75
PTPRC-202ENST00000367364 TLE3Q04726 772 aa4.11□□□□□ -1.75
PTPRC-202ENST00000367364 CCDC173Q0VFZ6 552 aa4.11□□□□□ -1.75
PTPRC-202ENST00000367364 SETMARQ53H47 684 aaPredicted RBP4.11□□□□□ -1.75
PTPRC-202ENST00000367364 PLA2G4FQ68DD2 849 aa4.11□□□□□ -1.75
PTPRC-202ENST00000367364 TMEM88Q6PEY1 159 aa4.11□□□□□ -1.75
PTPRC-202ENST00000367364 DARS2Q6PI48 645 aaKnown RBP4.11□□□□□ -1.75
PTPRC-202ENST00000367364 CCDC149Q6ZUS6 474 aa4.11□□□□□ -1.75
PTPRC-202ENST00000367364 FOXL2NBQ6ZUU3 175 aa4.11□□□□□ -1.75
PTPRC-202ENST00000367364 TUBA1AQ71U36 451 aa4.11□□□□□ -1.75
PTPRC-202ENST00000367364 MON1BQ7L1V2 547 aa4.11□□□□□ -1.75
PTPRC-202ENST00000367364 CENPQQ7L2Z9 268 aaPredicted RBP4.11□□□□□ -1.75
PTPRC-202ENST00000367364 OR4N4Q8N0Y3 316 aa4.11□□□□□ -1.75
PTPRC-202ENST00000367364 TXNDC15Q96J42 360 aa4.11□□□□□ -1.75
PTPRC-202ENST00000367364 TUBA1CQ9BQE3 449 aa4.11□□□□□ -1.75
PTPRC-202ENST00000367364 HIPK3Q9H422 1215 aa4.11□□□□□ -1.75
PTPRC-202ENST00000367364 GEMIN8Q9NWZ8 242 aaKnown RBP4.11□□□□□ -1.75
PTPRC-202ENST00000367364 NOL7Q9UMY1 257 aaKnown RBP4.11□□□□□ -1.75
PTPRC-202ENST00000367364 BRD4O60885 1362 aaPredicted RBP4.11□□□□□ -1.75
PTPRC-202ENST00000367364 NINLQ9Y2I6 1382 aa4.11□□□□□ -1.75
PTPRC-202ENST00000367364 ZNF608Q9ULD9 1512 aaPredicted RBP4.11□□□□□ -1.75
PTPRC-202ENST00000367364 ITM2AO43736 263 aa4.1□□□□□ -1.75
PTPRC-202ENST00000367364 KIF1CO43896 1103 aaKnown RBP4.1□□□□□ -1.75
PTPRC-202ENST00000367364 TAF5LO75529 589 aa4.1□□□□□ -1.75
PTPRC-202ENST00000367364 CRYAAP02489 173 aa4.1□□□□□ -1.75
PTPRC-202ENST00000367364 HSPA5P11021 654 aaKnown RBP4.1□□□□□ -1.75
PTPRC-202ENST00000367364 CDH12P55289 794 aa4.1□□□□□ -1.75
PTPRC-202ENST00000367364 MYBPC2Q14324 1141 aa4.1□□□□□ -1.75
PTPRC-202ENST00000367364 KIAA0753Q2KHM9 967 aa4.1□□□□□ -1.75
PTPRC-202ENST00000367364 CLEC17AQ6ZS10 378 aa4.1□□□□□ -1.75
PTPRC-202ENST00000367364 EPHX4Q8IUS5 362 aa4.1□□□□□ -1.75
PTPRC-202ENST00000367364 FAM110DQ8TAY7 271 aaPredicted RBP4.1□□□□□ -1.75
PTPRC-202ENST00000367364 USP13Q92995 863 aaPredicted RBP4.1□□□□□ -1.75
PTPRC-202ENST00000367364 ZNF333Q96JL9 665 aa4.1□□□□□ -1.75
PTPRC-202ENST00000367364 GFM1Q96RP9 751 aaKnown RBP4.1□□□□□ -1.75
PTPRC-202ENST00000367364 MAGEB5Q9BZ81 275 aa4.1□□□□□ -1.75
PTPRC-202ENST00000367364 UNKQ9C0B0 810 aaKnown RBP4.1□□□□□ -1.75
PTPRC-202ENST00000367364 TONSLQ96HA7 1378 aa4.1□□□□□ -1.75
PTPRC-202ENST00000367364 AQRO60306 1485 aaKnown RBP eCLIP4.1□□□□□ -1.75
PTPRC-202ENST00000367364 PLXNC1O60486 1568 aa4.1□□□□□ -1.75
PTPRC-202ENST00000367364 KIF14Q15058 1648 aa4.1□□□□□ -1.75
PTPRC-202ENST00000367364 CYP3A7-CYP3A51PA0A087WV96 503 aa4.09□□□□□ -1.75
PTPRC-202ENST00000367364 TCRBV7S3A2A0A539 114 aa4.09□□□□□ -1.75
PTPRC-202ENST00000367364 C3orf70A6NLC5 250 aaPredicted RBP4.09□□□□□ -1.75
PTPRC-202ENST00000367364 CYP3A7P24462 503 aa4.09□□□□□ -1.75
PTPRC-202ENST00000367364 GABRB3P28472 473 aa4.09□□□□□ -1.75
PTPRC-202ENST00000367364 CDKN1AP38936 164 aa4.09□□□□□ -1.75
PTPRC-202ENST00000367364 IRX3P78415 501 aaPredicted RBP4.09□□□□□ -1.75
PTPRC-202ENST00000367364 GABPB1Q06547 395 aaPredicted RBP4.09□□□□□ -1.75
PTPRC-202ENST00000367364 DAG1Q14118 895 aa4.09□□□□□ -1.75
PTPRC-202ENST00000367364 CTTNQ14247 550 aaKnown RBP4.09□□□□□ -1.75
PTPRC-202ENST00000367364 SASS6Q6UVJ0 657 aa4.09□□□□□ -1.75
PTPRC-202ENST00000367364 UNQ6126/PRO20091Q6UXV3 157 aa4.09□□□□□ -1.75
PTPRC-202ENST00000367364 KRTAP5-5Q701N2 237 aaPredicted RBP4.09□□□□□ -1.75
PTPRC-202ENST00000367364 PALB2Q86YC2 1186 aa4.09□□□□□ -1.75
PTPRC-202ENST00000367364 CREBRFQ8IUR6 639 aa4.09□□□□□ -1.75
PTPRC-202ENST00000367364 CIARTQ8N365 385 aaPredicted RBP4.09□□□□□ -1.75
PTPRC-202ENST00000367364 PGBD5Q8N414 524 aa4.09□□□□□ -1.75
PTPRC-202ENST00000367364 MAB21L3Q8N8X9 362 aa4.09□□□□□ -1.75
PTPRC-202ENST00000367364 MAPK1IP1LQ8NDC0 245 aa4.09□□□□□ -1.75
PTPRC-202ENST00000367364 MYRIPQ8NFW9 859 aa4.09□□□□□ -1.75
PTPRC-202ENST00000367364 ZNF622Q969S3 477 aaKnown RBP eCLIP4.09□□□□□ -1.75
PTPRC-202ENST00000367364 BTBD1Q9H0C5 482 aa4.09□□□□□ -1.75
PTPRC-202ENST00000367364 SLC52A1Q9NWF4 448 aa4.09□□□□□ -1.75
PTPRC-202ENST00000367364 DDX43Q9NXZ2 648 aaKnown RBP4.09□□□□□ -1.75
PTPRC-202ENST00000367364 DDX20Q9UHI6 824 aaKnown RBP4.09□□□□□ -1.75
PTPRC-202ENST00000367364 SLC45A1Q9Y2W3 748 aa4.09□□□□□ -1.75
PTPRC-202ENST00000367364 EIF3AQ14152 1382 aaKnown RBP4.09□□□□□ -1.75
PTPRC-202ENST00000367364 NPC1L1Q9UHC9 1359 aa4.09□□□□□ -1.75
PTPRC-202ENST00000367364 NAIPQ13075 1403 aa4.09□□□□□ -1.75
PTPRC-202ENST00000367364 UQCRHLA0A096LP55 91 aa4.08□□□□□ -1.76
PTPRC-202ENST00000367364 DYTNA2CJ06 578 aa4.08□□□□□ -1.76
PTPRC-202ENST00000367364 J3KTA2 159 aa4.08□□□□□ -1.76
PTPRC-202ENST00000367364 TPP1O14773 563 aa4.08□□□□□ -1.76
PTPRC-202ENST00000367364 ARHGEF11O15085 1522 aa4.08□□□□□ -1.76
PTPRC-202ENST00000367364 SLC22A3O75751 556 aa4.08□□□□□ -1.76
PTPRC-202ENST00000367364 CLDN7O95471 211 aa4.08□□□□□ -1.76
PTPRC-202ENST00000367364 HRGP04196 525 aa4.08□□□□□ -1.76
PTPRC-202ENST00000367364 EPRSP07814 1512 aaKnown RBP4.08□□□□□ -1.76
PTPRC-202ENST00000367364 UQCRHP07919 91 aa4.08□□□□□ -1.76
PTPRC-202ENST00000367364 POLA1P09884 1462 aaPredicted RBP4.08□□□□□ -1.76
PTPRC-202ENST00000367364 CAPN2P17655 700 aa4.08□□□□□ -1.76
PTPRC-202ENST00000367364 EGR1P18146 543 aa4.08□□□□□ -1.76
PTPRC-202ENST00000367364 RPL17P18621 184 aaKnown RBP4.08□□□□□ -1.76
PTPRC-202ENST00000367364 TIMP3P35625 211 aa4.08□□□□□ -1.76
PTPRC-202ENST00000367364 TNNT2P45379 298 aaPredicted RBP4.08□□□□□ -1.76
PTPRC-202ENST00000367364 RPL15P61313 204 aaKnown RBP4.08□□□□□ -1.76
PTPRC-202ENST00000367364 CSHL1Q14406 222 aa4.08□□□□□ -1.76
PTPRC-202ENST00000367364 PLK5Q496M5 336 aa4.08□□□□□ -1.76
PTPRC-202ENST00000367364 XKR9Q5GH70 373 aa4.08□□□□□ -1.76
PTPRC-202ENST00000367364 RPRD2Q5VT52 1461 aaKnown RBP4.08□□□□□ -1.76
PTPRC-202ENST00000367364 ANKRD40Q6AI12 368 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms