RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 JAM2P57087 298 aa12.2□□□□□ -0.46
CDC42BPA-203ENST00000366766 TRAF7Q6Q0C0 670 aa12.2□□□□□ -0.46
CDC42BPA-203ENST00000366766 CCDC81Q6ZN84 652 aa12.2□□□□□ -0.46
CDC42BPA-203ENST00000366766 TBC1D10AQ9BXI6 508 aa12.2□□□□□ -0.46
CDC42BPA-203ENST00000366766 ACE2Q9BYF1 805 aaPredicted RBP12.2□□□□□ -0.46
CDC42BPA-203ENST00000366766 SNX6Q9UNH7 406 aa12.2□□□□□ -0.46
CDC42BPA-203ENST00000366766 SNRPB2P08579 225 aaKnown RBP12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 RBL1P28749 1068 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 PTDSS1P48651 473 aaKnown RBP12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 RIPOR1Q6ZS17 1223 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 RHOJQ9H4E5 214 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 ADRB2P07550 413 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 PTPRAP18433 802 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 ITGB6P18564 788 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 TNK2Q07912 1038 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 GRM3Q14832 879 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 CASP12Q6UXS9 341 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 USP50Q70EL3 339 aaPredicted RBP12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 SH3BP5LQ7L8J4 393 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 CCNB1IP1Q9NPC3 277 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 MTF2Q9Y483 593 aaPredicted RBP12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 PHLPP1O60346 1717 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 IRF1P10914 325 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 CCNB1P14635 433 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 GPR15P49685 360 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 PSEN2P49810 448 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 PPTC7Q8NI37 304 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 APBA2Q99767 749 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 SESN1Q9Y6P5 492 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 hCG_2014768A0A024R1R8 64 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 MAGEA10P43363 369 aaPredicted RBP12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 FSCN1Q16658 493 aaKnown RBP12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 ARMC12Q5T9G4 340 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 ZNF438Q7Z4V0 828 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 ZW10O43264 779 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 HGSNATQ68CP4 663 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 CDRT15Q96T59 188 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 MYL12AP19105 171 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 SLC18A1P54219 525 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 SLC25A52Q3SY17 297 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 PTAR1Q7Z6K3 402 aaPredicted RBP12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 PACS2Q86VP3 889 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 LNX1Q8TBB1 728 aaPredicted RBP12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 L3MBTL3Q96JM7 780 aaPredicted RBP12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 ZFYVE19Q96K21 471 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 TCRBV9S1A1TA0A576 114 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 FGFR1P11362 822 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 GRK4P32298 578 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 ERFP50548 548 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 PRKG2Q13237 762 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 RTKNQ9BST9 563 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 SPATA5L1Q9BVQ7 753 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 DIABLOQ9NR28 239 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 ARHGAP28Q9P2N2 729 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 KLHL20Q9Y2M5 609 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 CRHR1P34998 444 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 ORC1Q13415 861 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 ABRAXAS1Q6UWZ7 409 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 TKTL2Q9H0I9 626 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 PCDHGC3Q9UN70 934 aa12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 N4BP2Q86UW6 1770 aaPredicted RBP12.19□□□□□ -0.46
CDC42BPA-203ENST00000366766 AHCYL1O43865 530 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 TCEA3O75764 348 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 ZDHHC20Q5W0Z9 365 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 BCLAF3A2AJT9 711 aaKnown RBP12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 PHGDHO43175 533 aaKnown RBP12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 PIGNO95427 931 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 JAK1P23458 1154 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 MILR1Q7Z6M3 343 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 CDK20Q8IZL9 346 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 LEMD2Q8NC56 503 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 C19orf18Q8NEA5 215 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 C7orf26Q96N11 449 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 TTYH3Q9C0H2 523 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 ATP13A1Q9HD20 1204 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 SAE1Q9UBE0 346 aaPredicted RBP12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 ITM2BQ9Y287 266 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 ZBTB14O43829 449 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 AMPD1P23109 780 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 TSHZ1Q6ZSZ6 1077 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 ZYG11BQ9C0D3 744 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 THG1LQ9NWX6 298 aaKnown RBP12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 MDM4O15151 490 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 XYLBO75191 536 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 ITGA2BP08514 1039 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 PRDX6P30041 224 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 CARNMT1Q8N4J0 409 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 SENP8Q96LD8 212 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 APOL2Q9BQE5 337 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 REEP1Q9H902 201 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 TIMMDC1Q9NPL8 285 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 KCNK1O00180 336 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 PSMD5Q16401 504 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 MCCC1Q96RQ3 725 aaPredicted RBP12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 PDE9AO76083 593 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 S100A3P33764 101 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 LY6KQ17RY6 165 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 FAM92BQ6ZTR7 304 aa12.18□□□□□ -0.46
CDC42BPA-203ENST00000366766 DUSP16Q9BY84 665 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms