RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 THOC5Q13769 683 aaKnown RBP4.87□□□□□ -1.63
RNU4-28P-201ENST00000364739 BYSLQ13895 437 aaKnown RBP4.87□□□□□ -1.63
RNU4-28P-201ENST00000364739 KRT72Q14CN4 511 aa4.87□□□□□ -1.63
RNU4-28P-201ENST00000364739 RINLQ6ZS11 566 aa4.87□□□□□ -1.63
RNU4-28P-201ENST00000364739 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.87□□□□□ -1.63
RNU4-28P-201ENST00000364739 WDR5BQ86VZ2 330 aa4.87□□□□□ -1.63
RNU4-28P-201ENST00000364739 CCT6BQ92526 530 aa4.87□□□□□ -1.63
RNU4-28P-201ENST00000364739 TWSG1Q9GZX9 223 aa4.87□□□□□ -1.63
RNU4-28P-201ENST00000364739 LHPPQ9H008 270 aa4.87□□□□□ -1.63
RNU4-28P-201ENST00000364739 FEM1BQ9UK73 627 aa4.87□□□□□ -1.63
RNU4-28P-201ENST00000364739 MYO6Q9UM54 1294 aa4.87□□□□□ -1.63
RNU4-28P-201ENST00000364739 OSGIN2Q9Y236 505 aa4.87□□□□□ -1.63
RNU4-28P-201ENST00000364739 OR6C75A6NL08 312 aa4.86□□□□□ -1.63
RNU4-28P-201ENST00000364739 SPTLC2O15270 562 aa4.86□□□□□ -1.63
RNU4-28P-201ENST00000364739 DPP6P42658 865 aa4.86□□□□□ -1.63
RNU4-28P-201ENST00000364739 ROR2Q01974 943 aaKnown RBP4.86□□□□□ -1.63
RNU4-28P-201ENST00000364739 SLC4A8Q2Y0W8 1093 aa4.86□□□□□ -1.63
RNU4-28P-201ENST00000364739 NAPEPLDQ6IQ20 393 aa4.86□□□□□ -1.63
RNU4-28P-201ENST00000364739 HEPHL1Q6MZM0 1159 aa4.86□□□□□ -1.63
RNU4-28P-201ENST00000364739 ADAMTS14Q8WXS8 1223 aa4.86□□□□□ -1.63
RNU4-28P-201ENST00000364739 THAP4Q8WY91 577 aa4.86□□□□□ -1.63
RNU4-28P-201ENST00000364739 RNFT2Q96EX2 444 aa4.86□□□□□ -1.63
RNU4-28P-201ENST00000364739 TMEM204Q9BSN7 226 aa4.86□□□□□ -1.63
RNU4-28P-201ENST00000364739 KLHL31Q9H511 634 aa4.86□□□□□ -1.63
RNU4-28P-201ENST00000364739 HIF1ANQ9NWT6 349 aa4.86□□□□□ -1.63
RNU4-28P-201ENST00000364739 DHDHQ9UQ10 334 aa4.86□□□□□ -1.63
RNU4-28P-201ENST00000364739 DERAQ9Y315 318 aa4.86□□□□□ -1.63
RNU4-28P-201ENST00000364739 SPRY3O43610 288 aa4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 LDB2O43679 373 aa4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 STRNO43815 780 aa4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 TCEA3O75764 348 aa4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 DHRS4L1P0CG22 281 aa4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 RFC1P35251 1148 aaPredicted RBP4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 SKIV2L2P42285 1042 aaKnown RBP4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 GRK6P43250 576 aa4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 CLCNKBP51801 687 aa4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 ZP1P60852 638 aa4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 ACTR2P61160 394 aa4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 ZXDBP98169 803 aa4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 HNF4GQ14541 408 aa4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 KLHL22Q53GT1 634 aa4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 TBC1D9BQ66K14 1250 aa4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 ATG9BQ674R7 924 aa4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 AADACL2Q6P093 401 aa4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 CRELD2Q6UXH1 353 aaPredicted RBP4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 SETD9Q8NE22 299 aa4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 CEP70Q8NHQ1 597 aa4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 HDAC7Q8WUI4 952 aa4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 WASF1Q92558 559 aa4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 ATOH1Q92858 354 aaPredicted RBP4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 MASTLQ96GX5 879 aa4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 FRG2BQ96QU4 278 aa4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 DCLK3Q9C098 648 aa4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 CATSPERBQ9H7T0 1116 aa4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 PLK2Q9NYY3 685 aa4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 DNAJC16Q9Y2G8 782 aa4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 PCDHGB3Q9Y5G1 929 aa4.85□□□□□ -1.63
RNU4-28P-201ENST00000364739 TMEM247A6NEH6 219 aa4.84□□□□□ -1.63
RNU4-28P-201ENST00000364739 SAC3D1A6NKF1 404 aa4.84□□□□□ -1.63
RNU4-28P-201ENST00000364739 DHX16O60231 1041 aaKnown RBP4.84□□□□□ -1.63
RNU4-28P-201ENST00000364739 PIP5K1CO60331 668 aa4.84□□□□□ -1.63
RNU4-28P-201ENST00000364739 CLDN7O95471 211 aa4.84□□□□□ -1.63
RNU4-28P-201ENST00000364739 METTL18O95568 372 aa4.84□□□□□ -1.63
RNU4-28P-201ENST00000364739 TK1P04183 234 aa4.84□□□□□ -1.63
RNU4-28P-201ENST00000364739 HOXB6P17509 224 aaKnown RBP4.84□□□□□ -1.63
RNU4-28P-201ENST00000364739 PDLIM4P50479 330 aa4.84□□□□□ -1.63
RNU4-28P-201ENST00000364739 CDH12P55289 794 aa4.84□□□□□ -1.63
RNU4-28P-201ENST00000364739 LTBQ06643 244 aa4.84□□□□□ -1.63
RNU4-28P-201ENST00000364739 Q0VFX4 171 aa4.84□□□□□ -1.63
RNU4-28P-201ENST00000364739 ZNF284Q2VY69 593 aa4.84□□□□□ -1.63
RNU4-28P-201ENST00000364739 CBWD5Q5RIA9 395 aa4.84□□□□□ -1.63
RNU4-28P-201ENST00000364739 ANKRD45Q5TZF3 282 aa4.84□□□□□ -1.63
RNU4-28P-201ENST00000364739 OTUD1Q5VV17 481 aaPredicted RBP4.84□□□□□ -1.63
RNU4-28P-201ENST00000364739 SERPINA11Q86U17 422 aa4.84□□□□□ -1.63
RNU4-28P-201ENST00000364739 HERC6Q8IVU3 1022 aa4.84□□□□□ -1.63
RNU4-28P-201ENST00000364739 TMEM57Q8N5G2 664 aa4.84□□□□□ -1.63
RNU4-28P-201ENST00000364739 IQCF1Q8N6M8 205 aa4.84□□□□□ -1.63
RNU4-28P-201ENST00000364739 RASSF8Q8NHQ8 419 aa4.84□□□□□ -1.63
RNU4-28P-201ENST00000364739 SDCCAG3Q96C92 435 aa4.84□□□□□ -1.63
RNU4-28P-201ENST00000364739 COG8Q96MW5 612 aa4.84□□□□□ -1.63
RNU4-28P-201ENST00000364739 PPP1R10Q96QC0 940 aaKnown RBP4.84□□□□□ -1.63
RNU4-28P-201ENST00000364739 PPCSQ9HAB8 311 aa4.84□□□□□ -1.63
RNU4-28P-201ENST00000364739 SEL1LQ9UBV2 794 aa4.84□□□□□ -1.63
RNU4-28P-201ENST00000364739 FZD10Q9ULW2 581 aa4.84□□□□□ -1.63
RNU4-28P-201ENST00000364739 MORC2Q9Y6X9 1032 aaPredicted RBP4.84□□□□□ -1.63
RNU4-28P-201ENST00000364739 OR6C68A6NDL8 312 aa4.83□□□□□ -1.64
RNU4-28P-201ENST00000364739 C4orf47A7E2U8 309 aa4.83□□□□□ -1.64
RNU4-28P-201ENST00000364739 MS4A18H0YCH9 400 aa4.83□□□□□ -1.64
RNU4-28P-201ENST00000364739 RNMTO43148 476 aaKnown RBP4.83□□□□□ -1.64
RNU4-28P-201ENST00000364739 SLC25A17O43808 307 aa4.83□□□□□ -1.64
RNU4-28P-201ENST00000364739 HOXD3P31249 432 aaPredicted RBP4.83□□□□□ -1.64
RNU4-28P-201ENST00000364739 HNF1BP35680 557 aa4.83□□□□□ -1.64
RNU4-28P-201ENST00000364739 CRYZQ08257 329 aaKnown RBP4.83□□□□□ -1.64
RNU4-28P-201ENST00000364739 GRAMD1BQ3KR37 738 aa4.83□□□□□ -1.64
RNU4-28P-201ENST00000364739 FSCBQ5H9T9 825 aa4.83□□□□□ -1.64
RNU4-28P-201ENST00000364739 DNTTIP2Q5QJE6 756 aaKnown RBP4.83□□□□□ -1.64
RNU4-28P-201ENST00000364739 KRTAP5-11Q6L8G4 156 aa4.83□□□□□ -1.64
RNU4-28P-201ENST00000364739 ANKRD44Q8N8A2 993 aa4.83□□□□□ -1.64
RNU4-28P-201ENST00000364739 MIGA1Q8NAN2 632 aa4.83□□□□□ -1.64
RNU4-28P-201ENST00000364739 GPT2Q8TD30 523 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms