RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 RNF125Q96EQ8 232 aa4.6□□□□□ -1.67
RNU6-560P-201ENST00000364007 PPM1MQ96MI6 270 aa4.6□□□□□ -1.67
RNU6-560P-201ENST00000364007 ZNF778Q96MU6 729 aa4.6□□□□□ -1.67
RNU6-560P-201ENST00000364007 TEFMQ96QE5 360 aaKnown RBP4.6□□□□□ -1.67
RNU6-560P-201ENST00000364007 MPHOSPH8Q99549 860 aa4.6□□□□□ -1.67
RNU6-560P-201ENST00000364007 EPHX3Q9H6B9 360 aa4.6□□□□□ -1.67
RNU6-560P-201ENST00000364007 PNRC2Q9NPJ4 139 aaKnown RBP4.6□□□□□ -1.67
RNU6-560P-201ENST00000364007 ATP8A2Q9NTI2 1148 aa4.6□□□□□ -1.67
RNU6-560P-201ENST00000364007 ZNF70Q9UC06 446 aaPredicted RBP4.6□□□□□ -1.67
RNU6-560P-201ENST00000364007 PCDHA12Q9UN75 941 aa4.6□□□□□ -1.67
RNU6-560P-201ENST00000364007 TMEM272A0A1B0GTI8 110 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 TNPO2O14787 897 aaKnown RBP4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 CEP104O60308 925 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 HBP1O60381 514 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 SERPINC1P01008 464 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 IL1AP01583 271 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 TNFSF8P32971 234 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 DPP6P42658 865 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 BAK1Q16611 211 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 ME3Q16798 604 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 ZNF667Q5HYK9 610 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 PXDC1Q5TGL8 231 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 TBC1D9BQ66K14 1250 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 C11orf87Q6NUJ2 197 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 FAM217AQ8IXS0 508 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 TCP11L2Q8N4U5 519 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 DPP10Q8N608 796 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 PLD5Q8N7P1 536 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 ZNF366Q8N895 744 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 NRACQ8N912 160 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 KDM1BQ8NB78 822 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 NAXEQ8NCW5 288 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 PIGOQ8TEQ8 1089 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 TBC1D22AQ8WUA7 517 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 CENPIQ92674 756 aaPredicted RBP4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 TRMOQ9BU70 441 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 SLC26A6Q9BXS9 759 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 INTS2Q9H0H0 1204 aaKnown RBP4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 MAP6D1Q9H9H5 199 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 SEMA4BQ9NPR2 832 aaPredicted RBP4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 ELOVL5Q9NYP7 299 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 GRHL1Q9NZI5 618 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 CNPY2Q9Y2B0 182 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 RAP2CQ9Y3L5 183 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 CLDN16Q9Y5I7 305 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 HS3ST3B1Q9Y662 390 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 CYP46A1Q9Y6A2 500 aa4.59□□□□□ -1.67
RNU6-560P-201ENST00000364007 PABPN1LA6NDY0 278 aaKnown RBP4.58□□□□□ -1.68
RNU6-560P-201ENST00000364007 TEX22C9J3V5 150 aa4.58□□□□□ -1.68
RNU6-560P-201ENST00000364007 FAM157AC9JC47 383 aa4.58□□□□□ -1.68
RNU6-560P-201ENST00000364007 J3KRW8 73 aa4.58□□□□□ -1.68
RNU6-560P-201ENST00000364007 PPEF2O14830 753 aa4.58□□□□□ -1.68
RNU6-560P-201ENST00000364007 SLC25A17O43808 307 aa4.58□□□□□ -1.68
RNU6-560P-201ENST00000364007 GUCY1B2O75343 617 aa4.58□□□□□ -1.68
RNU6-560P-201ENST00000364007 EPN2O95208 641 aa4.58□□□□□ -1.68
RNU6-560P-201ENST00000364007 FGF2P09038 288 aa4.58□□□□□ -1.68
RNU6-560P-201ENST00000364007 ABCD3P28288 659 aa4.58□□□□□ -1.68
RNU6-560P-201ENST00000364007 CCT4P50991 539 aaKnown RBP4.58□□□□□ -1.68
RNU6-560P-201ENST00000364007 ZNF81P51508 661 aa4.58□□□□□ -1.68
RNU6-560P-201ENST00000364007 TBX2Q13207 712 aaPredicted RBP4.58□□□□□ -1.68
RNU6-560P-201ENST00000364007 ODF3L2Q3SX64 289 aa4.58□□□□□ -1.68
RNU6-560P-201ENST00000364007 ZNF766Q5HY98 468 aa4.58□□□□□ -1.68
RNU6-560P-201ENST00000364007 FAM69AQ5T7M9 428 aa4.58□□□□□ -1.68
RNU6-560P-201ENST00000364007 C17orf99Q6UX52 265 aa4.58□□□□□ -1.68
RNU6-560P-201ENST00000364007 MOB3CQ70IA8 216 aa4.58□□□□□ -1.68
RNU6-560P-201ENST00000364007 PRSS45Q7RTY3 260 aa4.58□□□□□ -1.68
RNU6-560P-201ENST00000364007 CPXM2Q8N436 756 aa4.58□□□□□ -1.68
RNU6-560P-201ENST00000364007 ATOH1Q92858 354 aaPredicted RBP4.58□□□□□ -1.68
RNU6-560P-201ENST00000364007 FOXP1Q9H334 677 aaPredicted RBP4.58□□□□□ -1.68
RNU6-560P-201ENST00000364007 PREBQ9HCU5 417 aa4.58□□□□□ -1.68
RNU6-560P-201ENST00000364007 PEMTQ9UBM1 199 aa4.58□□□□□ -1.68
RNU6-560P-201ENST00000364007 SLC25A10Q9UBX3 287 aaPredicted RBP4.58□□□□□ -1.68
RNU6-560P-201ENST00000364007 ANAPC4Q9UJX5 808 aa4.58□□□□□ -1.68
RNU6-560P-201ENST00000364007 NAALADL1Q9UQQ1 740 aa4.58□□□□□ -1.68
RNU6-560P-201ENST00000364007 EVPLQ92817 2033 aa4.58□□□□□ -1.68
RNU6-560P-201ENST00000364007 ADGRF5Q8IZF2 1346 aa4.57□□□□□ -1.68
RNU6-560P-201ENST00000364007 LY6G6EA0A0G2JKS1 128 aa4.57□□□□□ -1.68
RNU6-560P-201ENST00000364007 GOLGA6L10A0A0M3HER8 536 aa4.57□□□□□ -1.68
RNU6-560P-201ENST00000364007 CCDC196A0A1B0GTZ2 297 aa4.57□□□□□ -1.68
RNU6-560P-201ENST00000364007 C17orf113A0A1B0GUU1 675 aa4.57□□□□□ -1.68
RNU6-560P-201ENST00000364007 HSPB6O14558 160 aa4.57□□□□□ -1.68
RNU6-560P-201ENST00000364007 WDHD1O75717 1129 aaPredicted RBP4.57□□□□□ -1.68
RNU6-560P-201ENST00000364007 UNGP13051 313 aaPredicted RBP4.57□□□□□ -1.68
RNU6-560P-201ENST00000364007 TNFRSF1BP20333 461 aa4.57□□□□□ -1.68
RNU6-560P-201ENST00000364007 GPD2P43304 727 aa4.57□□□□□ -1.68
RNU6-560P-201ENST00000364007 ME1P48163 572 aa4.57□□□□□ -1.68
RNU6-560P-201ENST00000364007 CLCNKBP51801 687 aa4.57□□□□□ -1.68
RNU6-560P-201ENST00000364007 ARSFP54793 590 aa4.57□□□□□ -1.68
RNU6-560P-201ENST00000364007 CAMK1Q14012 370 aa4.57□□□□□ -1.68
RNU6-560P-201ENST00000364007 ACAD10Q6JQN1 1059 aa4.57□□□□□ -1.68
RNU6-560P-201ENST00000364007 TMEM71Q6P5X7 295 aa4.57□□□□□ -1.68
RNU6-560P-201ENST00000364007 IL20RBQ6UXL0 311 aa4.57□□□□□ -1.68
RNU6-560P-201ENST00000364007 H1FNTQ75WM6 255 aaPredicted RBP4.57□□□□□ -1.68
RNU6-560P-201ENST00000364007 CHD1LQ86WJ1 897 aa4.57□□□□□ -1.68
RNU6-560P-201ENST00000364007 FAM185AQ8N0U4 392 aa4.57□□□□□ -1.68
RNU6-560P-201ENST00000364007 MMP21Q8N119 569 aa4.57□□□□□ -1.68
RNU6-560P-201ENST00000364007 ARFGAP1Q8N6T3 406 aa4.57□□□□□ -1.68
RNU6-560P-201ENST00000364007 HORMAD2Q8N7B1 307 aa4.57□□□□□ -1.68
RNU6-560P-201ENST00000364007 TSPYL6Q8N831 410 aa4.57□□□□□ -1.68
RNU6-560P-201ENST00000364007 TNIP2Q8NFZ5 429 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms