RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 TTYH1Q9H313 450 aaPredicted RBP9.41□□□□□ -0.9
VPS13A-203ENST00000360280 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.41□□□□□ -0.9
VPS13A-203ENST00000360280 FAM153BP0C7A2 387 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 TLX1P31314 330 aaPredicted RBP9.41□□□□□ -0.9
VPS13A-203ENST00000360280 CACNB3P54284 484 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 C4orf46Q504U0 113 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 TRHDEQ9UKU6 1024 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 FNBP1LQ5T0N5 605 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 POU5F2Q8N7G0 328 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 INO80EQ8NBZ0 244 aaPredicted RBP9.41□□□□□ -0.9
VPS13A-203ENST00000360280 ATG4AQ8WYN0 398 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 TRDMT1O14717 391 aaKnown RBP9.41□□□□□ -0.9
VPS13A-203ENST00000360280 ZBTB14O43829 449 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 GATBO75879 557 aaKnown RBP9.41□□□□□ -0.9
VPS13A-203ENST00000360280 MLYCDO95822 493 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 CKMP06732 381 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 CKBP12277 381 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 SAPCD2Q86UD0 394 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 RAB43Q86YS6 212 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 ZKSCAN4Q969J2 545 aaPredicted RBP9.41□□□□□ -0.9
VPS13A-203ENST00000360280 GGA2Q9UJY4 613 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 NUMA1Q14980 2115 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 EFCAB12Q6NXP0 572 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 TDRKHQ9Y2W6 561 aaKnown RBP9.41□□□□□ -0.9
VPS13A-203ENST00000360280 OGTO15294 1046 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 GPR107Q5VW38 600 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 ANKRD26P1Q6NSI1 321 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 PAGE2Q7Z2X7 111 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 MCFD2Q8NI22 146 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 SEMA4DQ92854 862 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 A0A087WZ62 844 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 CASKO14936 926 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 POU5F1Q01860 360 aaKnown RBP9.41□□□□□ -0.9
VPS13A-203ENST00000360280 CBX3Q13185 183 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 BOP1Q14137 746 aaKnown RBP9.41□□□□□ -0.9
VPS13A-203ENST00000360280 MARC1Q5VT66 337 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 OR8H3Q8N146 312 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 AKAP1Q92667 903 aaKnown RBP eCLIP9.41□□□□□ -0.9
VPS13A-203ENST00000360280 PLOD2O00469 737 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 BTN3A1O00481 513 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 CYP2A6P11509 494 aaPredicted RBP9.41□□□□□ -0.9
VPS13A-203ENST00000360280 SLC20A2Q08357 652 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 INSCQ1MX18 579 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 FAM171BQ6P995 826 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.41□□□□□ -0.9
VPS13A-203ENST00000360280 TTC7BQ86TV6 843 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.41□□□□□ -0.9
VPS13A-203ENST00000360280 PIWIL2Q8TC59 973 aaKnown RBP9.41□□□□□ -0.9
VPS13A-203ENST00000360280 TMCO6Q96DC7 493 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 CATSPERZQ9NTU4 200 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 RHOCP08134 193 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 PSMA1P25786 263 aaKnown RBP9.41□□□□□ -0.9
VPS13A-203ENST00000360280 PRDX5P30044 214 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 RPL4P36578 427 aaKnown RBP9.41□□□□□ -0.9
VPS13A-203ENST00000360280 POLD2P49005 469 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 RPL14P50914 215 aaKnown RBP9.41□□□□□ -0.9
VPS13A-203ENST00000360280 MTMR2Q13614 643 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 C11orf24Q96F05 449 aaPredicted RBP9.41□□□□□ -0.9
VPS13A-203ENST00000360280 MCCC1Q96RQ3 725 aaPredicted RBP9.41□□□□□ -0.9
VPS13A-203ENST00000360280 MTF2Q9Y483 593 aaPredicted RBP9.41□□□□□ -0.9
VPS13A-203ENST00000360280 MYMKA6NI61 221 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 LCN1P1Q5VSP4 162 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 NT5DC3Q86UY8 548 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 TMEM169Q96HH4 297 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 HGH1Q9BTY7 390 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 FAM126AQ9BYI3 521 aaPredicted RBP9.41□□□□□ -0.9
VPS13A-203ENST00000360280 TRNAU1APQ9NX07 287 aaKnown RBP9.41□□□□□ -0.9
VPS13A-203ENST00000360280 COG5Q9UP83 839 aa9.41□□□□□ -0.9
VPS13A-203ENST00000360280 POLR2EP19388 210 aaKnown RBP9.4□□□□□ -0.9
VPS13A-203ENST00000360280 LHX1P48742 406 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 ZBTB6Q15916 424 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 CARNMT1Q8N4J0 409 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 KAT5Q92993 513 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 TMEM168Q9H0V1 697 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 CYP2F1P24903 491 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 KAT2BQ92831 832 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 ERVK-7P63135 1459 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 HACD1B0YJ81 288 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 C6orf222P0C671 652 aaPredicted RBP9.4□□□□□ -0.9
VPS13A-203ENST00000360280 HYIQ5T013 277 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 TLR8Q9NR97 1041 aaKnown RBP9.4□□□□□ -0.9
VPS13A-203ENST00000360280 MED11Q9P086 117 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 VPS4AQ9UN37 437 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 CAMTA2O94983 1202 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 FAM228BP0C875 321 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 SLC9A4Q6AI14 798 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 PDPRQ8NCN5 879 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 ZNF248Q8NDW4 579 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 CLIC5Q9NZA1 410 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 MED14O60244 1454 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 UGT2B17O75795 530 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 IDO1P14902 403 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 CXCR2P25025 360 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 ITIH5Q86UX2 942 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 OR8H1Q8NGG4 311 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 MTMR12Q9C0I1 747 aa9.4□□□□□ -0.9
VPS13A-203ENST00000360280 INTS7Q9NVH2 962 aaKnown RBP9.4□□□□□ -0.9
VPS13A-203ENST00000360280 ZNF135P52742 658 aaPredicted RBP9.4□□□□□ -0.9
VPS13A-203ENST00000360280 C1QBPQ07021 282 aaKnown RBP9.4□□□□□ -0.9
VPS13A-203ENST00000360280 SCN1BQ07699 218 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms