RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 KLKB1P03952 638 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 SOD2P04179 222 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 HLA-DQB2P05538 268 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 VIMP08670 466 aaKnown RBP5.18□□□□□ -1.58
ATXN3-202ENST00000359366 ABHD2P08910 425 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 BMP1P13497 986 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 CCNB1P14635 433 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 MYOGP15173 224 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 HMGA1P17096 107 aaKnown RBP5.18□□□□□ -1.58
ATXN3-202ENST00000359366 GLDCP23378 1020 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 NEK2P51955 445 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 WDR4P57081 412 aaKnown RBP5.18□□□□□ -1.58
ATXN3-202ENST00000359366 ITKQ08881 620 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 ELAVL2Q12926 359 aaKnown RBP5.18□□□□□ -1.58
ATXN3-202ENST00000359366 IHHQ14623 411 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 NAA25Q14CX7 972 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 SLC1A5Q15758 541 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 BRMS1LQ5PSV4 323 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 STXBP5Q5T5C0 1151 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 MROH9Q5TGP6 573 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 SLC8B1Q6J4K2 584 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 FAM47EQ6ZV65 393 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 BZW1Q7L1Q6 419 aaKnown RBP5.18□□□□□ -1.58
ATXN3-202ENST00000359366 LRRC34Q8IZ02 419 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 LGI2Q8N0V4 545 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 SCML4Q8N228 414 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 VPS37AQ8NEZ2 397 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 IPMKQ8NFU5 416 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 ZNF473Q8WTR7 871 aaKnown RBP5.18□□□□□ -1.58
ATXN3-202ENST00000359366 ARNTL2Q8WYA1 636 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 PSMG2Q969U7 264 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 ZNF689Q96CS4 500 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-202ENST00000359366 FCRL3Q96P31 734 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-202ENST00000359366 HAPLN3Q96S86 360 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 EBNA1BP2Q99848 306 aaKnown RBP5.18□□□□□ -1.58
ATXN3-202ENST00000359366 SH3GL1Q99961 368 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 ZBED2Q9BTP6 218 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 FOXP3Q9BZS1 431 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 SMG9Q9H0W8 520 aaKnown RBP5.18□□□□□ -1.58
ATXN3-202ENST00000359366 EPN3Q9H201 632 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 ZNF334Q9HCZ1 680 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-202ENST00000359366 SLC17A7Q9P2U7 560 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 PSMC3IPQ9P2W1 217 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-202ENST00000359366 LGALS13Q9UHV8 139 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 GGT7Q9UJ14 662 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 CORO1CQ9ULV4 474 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-202ENST00000359366 YIPF1Q9Y548 306 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 KIAA1671Q9BY89 1806 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 ANAPC1Q9H1A4 1944 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 DNAH14Q0VDD8 3507 aa5.18□□□□□ -1.58
ATXN3-202ENST00000359366 COL4A4P53420 1690 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-202ENST00000359366 GMNCA6NCL1 334 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 ZNF840PA6NDX5 716 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 TCP11X1B4DZS4 312 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 TRIM49D1C9J1S8 452 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 CCL22O00626 93 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 KDM1AO60341 852 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 ATP6V1G1O75348 118 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 MTRF1O75570 445 aaKnown RBP5.17□□□□□ -1.58
ATXN3-202ENST00000359366 TCEA3O75764 348 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 ARHGEF15O94989 841 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 EFEMP2O95967 443 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 APOEP02649 317 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 C1QAP02745 245 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 URODP06132 367 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 CA4P22748 312 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 FOXN2P32314 431 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 GBP2P32456 591 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-202ENST00000359366 PHBP35232 272 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 MAGEA3P43357 314 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 HCAR3P49019 387 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 AIF1P55008 147 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 ZXDBP98169 803 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 CYP4F8P98187 520 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 SLC10A7Q0GE19 358 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 POU6F1Q14863 301 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 TRIP4Q15650 581 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-202ENST00000359366 PARP6Q2NL67 630 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 TEX44Q53QW1 395 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 TXNDC8Q6A555 127 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 FAAH2Q6GMR7 532 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 TLDC1Q6P9B6 456 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 TAOK1Q7L7X3 1001 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 NECAB2Q7Z6G3 386 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 YTHDF3Q7Z739 585 aaKnown RBP5.17□□□□□ -1.58
ATXN3-202ENST00000359366 ZNF683Q8IZ20 524 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 SLC25A41Q8N5S1 370 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 ARFGAP2Q8N6H7 521 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 RTL3Q8N8U3 475 aaKnown RBP5.17□□□□□ -1.58
ATXN3-202ENST00000359366 ZNF461Q8TAF7 563 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 ARMC5Q96C12 935 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 HDAC11Q96DB2 347 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 MFSD3Q96ES6 412 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 STAMBPL1Q96FJ0 436 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 AGAP2Q99490 1192 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 SLC13A1Q9BZW2 595 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 RC3H2Q9HBD1 1191 aaKnown RBP5.17□□□□□ -1.58
ATXN3-202ENST00000359366 NT5MQ9NPB1 228 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 CHRAC1Q9NRG0 131 aa5.17□□□□□ -1.58
ATXN3-202ENST00000359366 FGFR1OP2Q9NVK5 253 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms