RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 YAF2Q8IY57 180 aa13.9□□□□□ -0.19
VCP-201ENST00000358901 PLD5Q8N7P1 536 aa13.9□□□□□ -0.19
VCP-201ENST00000358901 TSPAN14Q8NG11 270 aa13.9□□□□□ -0.19
VCP-201ENST00000358901 RP9Q8TA86 221 aaKnown RBP13.9□□□□□ -0.19
VCP-201ENST00000358901 STAG3L4Q8TBR4 150 aa13.9□□□□□ -0.19
VCP-201ENST00000358901 ABHD8Q96I13 439 aa13.9□□□□□ -0.19
VCP-201ENST00000358901 SLC4A5Q9BY07 1137 aa13.9□□□□□ -0.19
VCP-201ENST00000358901 ST6GALNAC4Q9H4F1 302 aa13.9□□□□□ -0.19
VCP-201ENST00000358901 COL20A1Q9P218 1284 aa13.9□□□□□ -0.19
VCP-201ENST00000358901 CD48P09326 243 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 PIRTP0C851 137 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 MLNP12872 115 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 CDH13P55290 713 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 FCGRTP55899 365 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 IL2P60568 153 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 RAB10P61026 200 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 DGCR6LQ9BY27 220 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 ABCC13Q9NSE7 274 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.89□□□□□ -0.192e-7■■□□□ 13.7
VCP-201ENST00000358901 LZTS3O60299 673 aaPredicted RBP13.89□□□□□ -0.19
VCP-201ENST00000358901 SH3BGRLO75368 114 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 RASSF9O75901 435 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 CABYRO75952 493 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 RRM2P31350 389 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 ADARP55265 1226 aaKnown RBP13.89□□□□□ -0.19
VCP-201ENST00000358901 CNTN1Q12860 1018 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 RNASEH2BQ5TBB1 312 aaKnown RBP13.89□□□□□ -0.19
VCP-201ENST00000358901 LIPMQ5VYY2 423 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 SCIMPQ6UWF3 145 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 TMEM26Q6ZUK4 368 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 OR52K2Q8NGK3 314 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 FBXO30Q8TB52 745 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 UGT2B28Q9BY64 529 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 UBA2Q9UBT2 640 aaPredicted RBP13.89□□□□□ -0.19
VCP-201ENST00000358901 BCL9LQ86UU0 1499 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 ABCB1P08183 1280 aaPredicted RBP13.89□□□□□ -0.19
VCP-201ENST00000358901 PCNAP12004 261 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 PIK3R1P27986 724 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 WEE1P30291 646 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 MAXP61244 160 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 ACBD5Q5T8D3 534 aaPredicted RBP13.89□□□□□ -0.19
VCP-201ENST00000358901 TRAF7Q6Q0C0 670 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 ZDHHC24Q6UX98 284 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 C12orf50Q8NA57 414 aaPredicted RBP13.89□□□□□ -0.19
VCP-201ENST00000358901 PHF21AQ96BD5 680 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 MTERF3Q96E29 417 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 SMAD5Q99717 465 aaKnown RBP13.89□□□□□ -0.19
VCP-201ENST00000358901 STN1Q9H668 368 aaKnown RBP13.89□□□□□ -0.19
VCP-201ENST00000358901 SPAG4Q9NPE6 437 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 VPS45Q9NRW7 570 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 RIMBP3CA6NJZ7 1639 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 RIMBP3BA6NNM3 1639 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 RIMBP3Q9UFD9 1639 aa13.89□□□□□ -0.19
VCP-201ENST00000358901 PRR23AA6NEV1 266 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 B4GALT4O60513 344 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 ZIK1Q3SY52 487 aaPredicted RBP13.88□□□□□ -0.19
VCP-201ENST00000358901 CERCAMQ5T4B2 595 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 CIPCQ9C0C6 399 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 CATSPERZQ9NTU4 200 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 MCM8Q9UJA3 840 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 HBS1LQ9Y450 684 aaKnown RBP13.88□□□□□ -0.19
VCP-201ENST00000358901 GRIN2DO15399 1336 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 TRIM38O00635 465 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 GSTM1P09488 218 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 HGFP14210 728 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 MSH3P20585 1137 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 RAB27AP51159 221 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 CAMK2GQ13555 558 aaPredicted RBP13.88□□□□□ -0.19
VCP-201ENST00000358901 STARD3Q14849 445 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 LPCAT4Q643R3 524 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 IQSEC1Q6DN90 963 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 PLEKHM3Q6ZWE6 761 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 ZNF572Q7Z3I7 529 aaPredicted RBP13.88□□□□□ -0.19
VCP-201ENST00000358901 HEATR4Q86WZ0 1026 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 XYLT1Q86Y38 959 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 CSPG4P5Q96PW8 444 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 ADAM2Q99965 735 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 MRPL45Q9BRJ2 306 aaKnown RBP13.88□□□□□ -0.19
VCP-201ENST00000358901 MTFR1LQ9H019 292 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 RIBC2Q9H4K1 309 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 GIMAP4Q9NUV9 329 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 SELENONQ9NZV5 590 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 A8MX80 341 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 STAU1O95793 577 aaKnown RBP13.88□□□□□ -0.19
VCP-201ENST00000358901 OCM2P0CE71 109 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 OCMP0CE72 109 aaPredicted RBP13.88□□□□□ -0.19
VCP-201ENST00000358901 CYP2C18P33260 490 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 S100A3P33764 101 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 CLCN5P51795 746 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 C21orf59P57076 290 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 FBXW4P57775 412 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 ROR2Q01974 943 aaKnown RBP13.88□□□□□ -0.19
VCP-201ENST00000358901 ALDH6A1Q02252 535 aaKnown RBP13.88□□□□□ -0.19
VCP-201ENST00000358901 CCDC15Q0P6D6 951 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 ELAVL2Q12926 359 aaKnown RBP13.88□□□□□ -0.19
VCP-201ENST00000358901 PTP4A2Q12974 167 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 MAD2L1Q13257 205 aaPredicted RBP13.88□□□□□ -0.19
VCP-201ENST00000358901 DGCR6Q14129 220 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 ADGRD1Q6QNK2 874 aa13.88□□□□□ -0.19
VCP-201ENST00000358901 CYP4X1Q8N118 509 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms