RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 NKIRAS1Q9NYS0 192 aa13.53□□□□□ -0.24
NFIX-201ENST00000358552 MOCS1Q9NZB8 636 aa13.53□□□□□ -0.24
NFIX-201ENST00000358552 TBC1D30Q9Y2I9 924 aa13.53□□□□□ -0.24
NFIX-201ENST00000358552 FAM237BA0A1B0GVD1 139 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 LINC01553A4QN01 128 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 PRPF4O43172 522 aaKnown RBP eCLIP13.52□□□□□ -0.25
NFIX-201ENST00000358552 PRAMEF11O60813 436 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 AVILO75366 819 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 VIMP08670 466 aaKnown RBP13.52□□□□□ -0.25
NFIX-201ENST00000358552 BRAFP15056 766 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 PTPN2P17706 415 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 GABRR2P28476 465 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 SLC8A1P32418 973 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 EPHA5P54756 1037 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 SMAD3P84022 425 aaKnown RBP13.52□□□□□ -0.25
NFIX-201ENST00000358552 GNA12Q03113 381 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 ARHGAP15Q53QZ3 475 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 HP1BP3Q5SSJ5 553 aaPredicted RBP13.52□□□□□ -0.25
NFIX-201ENST00000358552 UNC5AQ6ZN44 842 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 HTR3DQ70Z44 454 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 TMEM150AQ86TG1 271 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 TMEM135Q86UB9 458 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 TRABD2AQ86V40 505 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 TP53INP2Q8IXH6 220 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 FAM217AQ8IXS0 508 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 CPXM2Q8N436 756 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 CNTD1Q8N815 330 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 HJURPQ8NCD3 748 aaPredicted RBP13.52□□□□□ -0.25
NFIX-201ENST00000358552 MICAL1Q8TDZ2 1067 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 AUTS2Q8WXX7 1259 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 CCT6BQ92526 530 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 HMCESQ96FZ2 354 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 PRKD2Q9BZL6 878 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 RNF38Q9H0F5 515 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 NOL6Q9H6R4 1146 aaKnown RBP13.52□□□□□ -0.25
NFIX-201ENST00000358552 ARNT2Q9HBZ2 717 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 AGO1Q9UL18 857 aaKnown RBP13.52□□□□□ -0.25
NFIX-201ENST00000358552 LAMA3Q16787 3333 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 MYO7AQ13402 2215 aa13.52□□□□□ -0.25
NFIX-201ENST00000358552 MTCL1Q9Y4B5 1905 aaKnown RBP13.51□□□□□ -0.25
NFIX-201ENST00000358552 LCHNA4D1U4 455 aa13.51□□□□□ -0.25
NFIX-201ENST00000358552 FAM159BA6NKW6 160 aa13.51□□□□□ -0.25
NFIX-201ENST00000358552 RASSF9O75901 435 aa13.51□□□□□ -0.25
NFIX-201ENST00000358552 CNTN5O94779 1100 aa13.51□□□□□ -0.25
NFIX-201ENST00000358552 SNRPAP09012 282 aaKnown RBP13.51□□□□□ -0.25
NFIX-201ENST00000358552 CLCN4P51793 760 aa13.51□□□□□ -0.25
NFIX-201ENST00000358552 TMED2Q15363 201 aa13.51□□□□□ -0.25
NFIX-201ENST00000358552 KBTBD12Q3ZCT8 623 aa13.51□□□□□ -0.25
NFIX-201ENST00000358552 RALGPS1Q5JS13 557 aa13.51□□□□□ -0.25
NFIX-201ENST00000358552 PCID2Q5JVF3 399 aa13.51□□□□□ -0.25
NFIX-201ENST00000358552 NLRP9Q7RTR0 991 aa13.51□□□□□ -0.25
NFIX-201ENST00000358552 TFAP2DQ7Z6R9 452 aa13.51□□□□□ -0.25
NFIX-201ENST00000358552 ZNF354CQ86Y25 554 aa13.51□□□□□ -0.25
NFIX-201ENST00000358552 LRRN4Q8WUT4 740 aa13.51□□□□□ -0.25
NFIX-201ENST00000358552 CFAP36Q96G28 342 aa13.51□□□□□ -0.25
NFIX-201ENST00000358552 TBL1YQ9BQ87 522 aa13.51□□□□□ -0.25
NFIX-201ENST00000358552 WDR83Q9BRX9 315 aaKnown RBP13.51□□□□□ -0.25
NFIX-201ENST00000358552 FSD1LQ9BXM9 530 aa13.51□□□□□ -0.25
NFIX-201ENST00000358552 POLR1EQ9GZS1 481 aaKnown RBP13.51□□□□□ -0.25
NFIX-201ENST00000358552 NDFIP2Q9NV92 336 aa13.51□□□□□ -0.25
NFIX-201ENST00000358552 ZDHHC7Q9NXF8 308 aa13.51□□□□□ -0.25
NFIX-201ENST00000358552 SEPT3Q9UH03 358 aa13.51□□□□□ -0.25
NFIX-201ENST00000358552 SH3BP1Q9Y3L3 701 aa13.51□□□□□ -0.25
NFIX-201ENST00000358552 ZFP37Q9Y6Q3 630 aaPredicted RBP13.51□□□□□ -0.25
NFIX-201ENST00000358552 FAM47DPA6NHR8 397 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 ZNF197O14709 1029 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 KDELR3O43731 214 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 RHOCP08134 193 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 PAMP19021 973 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 GCAP28676 217 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 SCTRP47872 440 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 RGS19P49795 217 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 SESN2P58004 480 aaPredicted RBP13.5□□□□□ -0.25
NFIX-201ENST00000358552 ERVFC1P60507 584 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 LBRQ14739 615 aaKnown RBP13.5□□□□□ -0.25
NFIX-201ENST00000358552 SNCBQ16143 134 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 TMC8Q8IU68 726 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 IGDCC3Q8IVU1 814 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 DEPDC1BQ8WUY9 529 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 PEX13Q92968 403 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 TMA16Q96EY4 203 aaKnown RBP13.5□□□□□ -0.25
NFIX-201ENST00000358552 IMP4Q96G21 291 aaKnown RBP13.5□□□□□ -0.25
NFIX-201ENST00000358552 TGS1Q96RS0 853 aaKnown RBP13.5□□□□□ -0.25
NFIX-201ENST00000358552 LRRC3Q9BY71 257 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 LMAN2LQ9H0V9 348 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 ATXN3LQ9H3M9 355 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 YY1AP1Q9H869 796 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 TRPC7Q9HCX4 862 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 TXNDC16Q9P2K2 825 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 TBK1Q9UHD2 729 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 SOX13Q9UN79 622 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 ARIH1Q9Y4X5 557 aaPredicted RBP13.5□□□□□ -0.25
NFIX-201ENST00000358552 C2orf78A6NCI8 922 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 GRXCR1A8MXD5 290 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 TM9SF1O15321 606 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 BANF1O75531 89 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 PEX11BO96011 259 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 MT-ND3P03897 115 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 KLKB1P03952 638 aa13.5□□□□□ -0.25
NFIX-201ENST00000358552 CKMP06732 381 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms