RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 TSTD1Q8NFU3 115 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 OR2AJ1Q8NGZ0 328 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 HELQQ8TDG4 1101 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 KAT2AQ92830 837 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 ELMO3Q96BJ8 720 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 PRICKLE1Q96MT3 831 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 PANX2Q96RD6 677 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 WDR77Q9BQA1 342 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 NRDE2Q9H7Z3 1164 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 MARCH7Q9H992 704 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 SPATA6Q9NWH7 488 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 RDH8Q9NYR8 311 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 ZNF226Q9NYT6 803 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 PSME2Q9UL46 239 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 RPS6KL1Q9Y6S9 549 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 ZNF608Q9ULD9 1512 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 ISPDA4D126 451 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 H3BSH0 61 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 KHNYNO15037 678 aaKnown RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 BUD23O43709 281 aaKnown RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 FGBP02675 491 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 RB1P06400 928 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 ACRP10323 421 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 BDNFP23560 247 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 TPP2P29144 1249 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 UGT1A5P35504 534 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 CHN2P52757 468 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 RESTQ13127 1097 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 MAP2K5Q13163 448 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 MYBPC3Q14896 1274 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 FSCN1Q16658 493 aaKnown RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 NKAPLQ5M9Q1 402 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 NBPF12Q5TAG4 269 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 BNC2Q6ZN30 1099 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 THAP5Q7Z6K1 395 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 SP8Q8IXZ3 490 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 UBR7Q8N806 425 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 CHST13Q8NET6 341 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 OR2L8Q8NGY9 312 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 SPATA20Q8TB22 786 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 OR8D1Q8WZ84 308 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 DNASE1L2Q92874 299 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 TCEAL3Q969E4 200 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 SNX21Q969T3 373 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 C9orf72Q96LT7 481 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 A1CFQ9NQ94 594 aaKnown RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 ADH1CP00326 375 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 ANXA6P08133 673 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 AGXTP21549 392 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 CFL1P23528 166 aaKnown RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 SERPINA4P29622 427 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 PTPN5P54829 565 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 PIGHQ14442 188 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 CBX2Q14781 532 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 NFIXQ14938 502 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 PAGE2BQ5JRK9 111 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 GPR158Q5T848 1215 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 ZNF808Q8N4W9 903 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 SNX33Q8WV41 574 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 LINGO1Q96FE5 620 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 BORCS8Q96FH0 119 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 FAIM2Q9BWQ8 316 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 AP1M2Q9Y6Q5 423 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 TIAM1Q13009 1591 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 PLB1Q6P1J6 1458 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 MIF4GDA9UHW6 222 aaKnown RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 C9J4A7 227 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 EPHB6O15197 1021 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 SLC31A1O15431 190 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 COL6A1P12109 1028 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 VLDLRP98155 873 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 EPHA7Q15375 998 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 FAM46CQ5VWP2 391 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 MS4A14Q96JA4 679 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 CATSPER2Q96P56 530 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 OLFM3Q96PB7 478 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 FDXACB1Q9BRP7 624 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 NOD2Q9HC29 1040 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 RBM22Q9NW64 420 aaKnown RBP eCLIP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 LIMD1Q9UGP4 676 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 NARFQ9UHQ1 456 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 PLCL2Q9UPR0 1127 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 ASF1AQ9Y294 204 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 TMA7Q9Y2S6 64 aaKnown RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 RRP15Q9Y3B9 282 aaKnown RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 HBS1LQ9Y450 684 aaKnown RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 RALGAPBQ86X10 1494 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 PCF11O94913 1555 aaKnown RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 ANO9A1A5B4 782 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 PLIN3O60664 434 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 ADH1AP07327 375 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 ERCC1P07992 297 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 EIF1AXP47813 144 aaKnown RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 LHX1P48742 406 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 CDH13P55290 713 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 GABPB1Q06547 395 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-203ENST00000357654 NFATC2Q13469 925 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 MPP2Q14168 576 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 GRIK4Q16099 956 aa5.87□□□□□ -1.47
BRCA1-203ENST00000357654 STRA8Q7Z7C7 330 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms