RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 CYLDQ9NQC7 956 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 ABI2Q9NYB9 513 aaPredicted RBP6.94□□□□□ -1.3
RTN4-203ENST00000357376 DSEQ9UL01 958 aa6.94□□□□□ -1.3
RTN4-203ENST00000357376 GNEQ9Y223 722 aaKnown RBP6.94□□□□□ -1.3
RTN4-203ENST00000357376 CCL15-CCL14A0A0B4J2E2 113 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 SMIM28A0A1B0GU29 152 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 MYOCOSA0A1B0GUC4 107 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 NEMP2A6NFY4 417 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 ERI2A8K979 691 aaKnown RBP6.93□□□□□ -1.3
RTN4-203ENST00000357376 KCNU1A8MYU2 1149 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 TMEM233B4DJY2 109 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 PSMD12O00232 456 aaPredicted RBP6.93□□□□□ -1.3
RTN4-203ENST00000357376 STRNO43815 780 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 USP2O75604 605 aaPredicted RBP6.93□□□□□ -1.3
RTN4-203ENST00000357376 BAIAP3O94812 1187 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 F9P00740 461 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 CCDC166P0CW27 439 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 CYP2B6P20813 491 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 CYP3A5P20815 502 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 CCR1P32246 355 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 RPL5P46777 297 aaKnown RBP6.93□□□□□ -1.3
RTN4-203ENST00000357376 CCNG1P51959 295 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 THOP1P52888 689 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 ZNF280AP59817 542 aaPredicted RBP6.93□□□□□ -1.3
RTN4-203ENST00000357376 PSME3P61289 254 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 CCL15Q16663 113 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 TBCELQ5QJ74 424 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 C6orf10Q5SRN2 563 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 ARMC3Q5W041 872 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 TP53INP2Q8IXH6 220 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 BBS5Q8N3I7 341 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 UBR7Q8N806 425 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 RP9Q8TA86 221 aaKnown RBP6.93□□□□□ -1.3
RTN4-203ENST00000357376 NCLNQ969V3 563 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 CCDC97Q96F63 343 aaPredicted RBP6.93□□□□□ -1.3
RTN4-203ENST00000357376 VPS50Q96JG6 964 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 SENP8Q96LD8 212 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 GAD1Q99259 594 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 ALG9Q9H6U8 611 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 VTI1BQ9UEU0 232 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 ADAM28Q9UKQ2 775 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 TRHDEQ9UKU6 1024 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 AP4S1Q9Y587 144 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 COMMD3-BMI1R4GMX3 469 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 A0A088AWK7 358 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 GOLGA8CPA6NN73 597 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 NFKBIEO00221 500 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 HNRNPRO43390 633 aaKnown RBP6.93□□□□□ -1.3
RTN4-203ENST00000357376 TSPAN3O60637 253 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 E2F6O75461 281 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 POMCP01189 267 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 XRCC1P18887 633 aaPredicted RBP6.93□□□□□ -1.3
RTN4-203ENST00000357376 PTPN3P26045 913 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 LRPAP1P30533 357 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 RGS2P41220 211 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 GRIA3P42263 894 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 CDH13P55290 713 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 MAXP61244 160 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 INSCQ1MX18 579 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 TRNP1Q6NT89 227 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 NEPROQ6NW34 567 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 TMEM110Q86TL2 294 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 ZNF410Q86VK4 478 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 MYO1HQ8N1T3 1032 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 LRRC52Q8N7C0 313 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 CALML6Q8TD86 181 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 SLC35F5Q8WV83 523 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 SPATA16Q9BXB7 569 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 TLE6Q9H808 572 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 TXNRD2Q9NNW7 524 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 CROTQ9UKG9 612 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 NUMBLQ9Y6R0 609 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 TMEM114B3SHH9 223 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 CCL22O00626 93 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 FBXO21O94952 628 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 AP2A1O95782 977 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 RAB10P61026 200 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 PPIDQ08752 370 aaKnown RBP6.93□□□□□ -1.3
RTN4-203ENST00000357376 B3GNT6Q6ZMB0 384 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 HFE2Q6ZVN8 426 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 DHFR2Q86XF0 187 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 RNF168Q8IYW5 571 aaPredicted RBP6.93□□□□□ -1.3
RTN4-203ENST00000357376 FSTL5Q8N475 847 aaPredicted RBP6.93□□□□□ -1.3
RTN4-203ENST00000357376 EFHBQ8N7U6 833 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 ACTRT2Q8TDY3 377 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 DDI1Q8WTU0 396 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 NAT14Q8WUY8 206 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 RMND5BQ96G75 393 aaPredicted RBP6.93□□□□□ -1.3
RTN4-203ENST00000357376 CIB1Q99828 191 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 DUSP16Q9BY84 665 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 C6orf203Q9P0P8 240 aaPredicted RBP6.93□□□□□ -1.3
RTN4-203ENST00000357376 ADAMTS6Q9UKP5 1117 aa6.93□□□□□ -1.3
RTN4-203ENST00000357376 XIRP1Q702N8 1843 aaKnown RBP6.93□□□□□ -1.3
RTN4-203ENST00000357376 ADAMTSL1Q8N6G6 1762 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 TCRBV5S1A1TA0A578 114 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 E5RI56 91 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 INPP4BO15327 924 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 BNIP3LO60238 219 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 DAB1O75553 588 aa6.92□□□□□ -1.3
RTN4-203ENST00000357376 CABYRO75952 493 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms