RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 ZNF219Q9P2Y4 722 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-201ENST00000352993 CYTH4Q9UIA0 394 aa7.75□□□□□ -1.17
BRCA1-201ENST00000352993 A6NL46 340 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 SOBPA7XYQ1 873 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 C9IYK1 514 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 MRASO14807 208 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 SNAP91O60641 907 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 CCNE2O96020 404 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 POLBP06746 335 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 TNFSF9P41273 254 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 NEK2P51955 445 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 SLC7A2P52569 658 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 PRKAA1Q13131 559 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 FASTKQ14296 549 aaKnown RBP7.74□□□□□ -1.17
BRCA1-201ENST00000352993 PDK2Q15119 407 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 INSCQ1MX18 579 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 SLFN12LQ6IEE8 588 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 FRA10AC1Q70Z53 315 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 XYLT1Q86Y38 959 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 ZNF420Q8TAQ5 688 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-201ENST00000352993 FAM110BQ8TC76 370 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 TFAP2CQ92754 450 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 TAAR1Q96RJ0 339 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 OMDQ99983 421 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 ACE2Q9BYF1 805 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-201ENST00000352993 CCDC90BQ9GZT6 254 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 COA1Q9GZY4 146 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 MOCS1Q9NZB8 636 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 GMPR2Q9P2T1 348 aaKnown RBP7.74□□□□□ -1.17
BRCA1-201ENST00000352993 SLC27A5Q9Y2P5 690 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 PCDHA10Q9Y5I2 948 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 FER1L6Q2WGJ9 1857 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 ANKRD31Q8N7Z5 1873 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 PRORSD1PA6NEY8 169 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 TMEM114B3SHH9 223 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 H0YCG3 227 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 POLRMTO00411 1230 aaKnown RBP7.74□□□□□ -1.17
BRCA1-201ENST00000352993 PAPSS1O43252 624 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-201ENST00000352993 SULT1C4O75897 302 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 MT-ND1P03886 318 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 C2P06681 752 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 NHSL2Q5HYW2 709 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 TRAPPC3LQ5T215 181 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 OTUD3Q5T2D3 398 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-201ENST00000352993 ARHGEF16Q5VV41 709 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 HMBOX1Q6NT76 420 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 C15orf52Q6ZUT6 534 aaKnown RBP7.74□□□□□ -1.17
BRCA1-201ENST00000352993 SPPL2CQ8IUH8 684 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 SPATA6LQ8N4H0 392 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 Q8N9G6 341 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-201ENST00000352993 FNIP1Q8TF40 1166 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 TMEM174Q8WUU8 243 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 GBA3Q9H227 469 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 SPAG4Q9NPE6 437 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 POLE4Q9NR33 117 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 DUS2Q9NX74 493 aaKnown RBP7.74□□□□□ -1.17
BRCA1-201ENST00000352993 SYBUQ9NX95 663 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 RUVBL2Q9Y230 463 aaKnown RBP7.74□□□□□ -1.17
BRCA1-201ENST00000352993 TCAF2A6NFQ2 919 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 B4GAT1O43505 415 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 DGAT1O75907 488 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 CLPXO76031 633 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 ASS1P00966 412 aaKnown RBP7.74□□□□□ -1.17
BRCA1-201ENST00000352993 FASP25445 335 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 SERPINB1P30740 379 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 OPRL1P41146 370 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 ARPC4P59998 168 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 ACTR2P61160 394 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 KRT76Q01546 638 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 CA9Q16790 459 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 DUOXA2Q1HG44 320 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 SH3BP5LQ7L8J4 393 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 TAS1R3Q7RTX0 852 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 CNTD1Q8N815 330 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 COLGALT1Q8NBJ5 622 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 SHCBP1Q8NEM2 672 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 PCDH19Q8TAB3 1148 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 URGCPQ8TCY9 931 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 SLC7A3Q8WY07 619 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 CERS2Q96G23 380 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 ZNF668Q96K58 619 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-201ENST00000352993 GLT1D1Q96MS3 346 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 AGAP2Q99490 1192 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 OLFM1Q99784 485 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 CNPY3Q9BT09 278 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 UNC93B1Q9H1C4 597 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 SMARCAD1Q9H4L7 1026 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 PARVBQ9HBI1 364 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 FAM49BQ9NUQ9 324 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 MID2Q9UJV3 735 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 CCNL1Q9UK58 526 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-201ENST00000352993 NOX1Q9Y5S8 564 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 CPQQ9Y646 472 aa7.74□□□□□ -1.17
BRCA1-201ENST00000352993 SYNJ2BP-COX16A0A087WUM0 186 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 TCP10L2B9ZVM9 353 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 CLDN25C9JDP6 229 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 H0YJX3 145 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 ZNF701M0R085 212 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-201ENST00000352993 TADA2AO75478 443 aa7.73□□□□□ -1.17
BRCA1-201ENST00000352993 C8BP07358 591 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms