RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 RSPH1Q8WYR4 309 aa22.48■■□□□ 1.19
UPF3A-201ENST00000351487 TMEM209Q96SK2 561 aa22.48■■□□□ 1.19
UPF3A-201ENST00000351487 SIK2Q9H0K1 926 aa22.48■■□□□ 1.19
UPF3A-201ENST00000351487 UPF3AQ9H1J1 476 aaKnown RBP22.48■■□□□ 1.19
UPF3A-201ENST00000351487 PADI3Q9ULW8 664 aa22.48■■□□□ 1.19
UPF3A-201ENST00000351487 A0A0U1RQF3 1178 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 GOLGA8TH3BQL2 631 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 TNPO2O14787 897 aaKnown RBP22.47■■□□□ 1.19
UPF3A-201ENST00000351487 MATN3O15232 486 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 FKBP6O75344 327 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 PAGE1O75459 146 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 TUSC3Q13454 348 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 DSC3Q14574 896 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 CFAP157Q5JU67 520 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 CST9Q5W186 159 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 OVOS1Q6IE37 1185 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 DENND5AQ6IQ26 1287 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 AAGABQ6PD74 315 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 TDRD5Q8NAT2 981 aaKnown RBP22.47■■□□□ 1.19
UPF3A-201ENST00000351487 MRM3Q9HC36 420 aaKnown RBP22.47■■□□□ 1.19
UPF3A-201ENST00000351487 TLK1Q9UKI8 766 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 MAP3K7O43318 606 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 CABYRO75952 493 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 MT-CYBP00156 380 aaPredicted RBP22.47■■□□□ 1.19
UPF3A-201ENST00000351487 SBK3P0C264 359 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 SLC35E2BP0CK96 405 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 COL6A2P12110 1019 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 CYBAP13498 195 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 CD52P31358 61 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 CCR1P32246 355 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 POLD2P49005 469 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 HUNKP57058 714 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 KLC1Q07866 573 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 LIPMQ5VYY2 423 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 IRGCQ6NXR0 463 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 PGM2L1Q6PCE3 622 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 RAPH1Q70E73 1250 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 MICAL1Q8TDZ2 1067 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 STON2Q8WXE9 905 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 UROC1Q96N76 676 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 DRC3Q9H069 523 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 ILKAPQ9H0C8 392 aaPredicted RBP22.47■■□□□ 1.19
UPF3A-201ENST00000351487 TASP1Q9H6P5 420 aa22.47■■□□□ 1.19
UPF3A-201ENST00000351487 TK2O00142 265 aa22.46■■□□□ 1.19
UPF3A-201ENST00000351487 KIF1CO43896 1103 aaKnown RBP22.46■■□□□ 1.19
UPF3A-201ENST00000351487 NCF2P19878 526 aaPredicted RBP22.46■■□□□ 1.19
UPF3A-201ENST00000351487 GABRB3P28472 473 aa22.46■■□□□ 1.19
UPF3A-201ENST00000351487 ADRA1AP35348 466 aa22.46■■□□□ 1.19
UPF3A-201ENST00000351487 SLC5A3P53794 718 aa22.46■■□□□ 1.19
UPF3A-201ENST00000351487 GEMP55040 296 aa22.46■■□□□ 1.19
UPF3A-201ENST00000351487 SLC12A1Q13621 1099 aa22.46■■□□□ 1.19
UPF3A-201ENST00000351487 USP10Q14694 798 aaKnown RBP22.46■■□□□ 1.19
UPF3A-201ENST00000351487 PPP2R5DQ14738 602 aa22.46■■□□□ 1.19
UPF3A-201ENST00000351487 SLC9B1Q4ZJI4 515 aa22.46■■□□□ 1.19
UPF3A-201ENST00000351487 POTEHQ6S545 545 aa22.46■■□□□ 1.19
UPF3A-201ENST00000351487 PHTF2Q8N3S3 785 aa22.46■■□□□ 1.19
UPF3A-201ENST00000351487 MAPK15Q8TD08 544 aa22.46■■□□□ 1.19
UPF3A-201ENST00000351487 TSNARE1Q96NA8 513 aa22.46■■□□□ 1.19
UPF3A-201ENST00000351487 CPSF2Q9P2I0 782 aaKnown RBP22.46■■□□□ 1.19
UPF3A-201ENST00000351487 RAP2CQ9Y3L5 183 aa22.46■■□□□ 1.19
UPF3A-201ENST00000351487 GLDCP23378 1020 aa22.46■■□□□ 1.19
UPF3A-201ENST00000351487 TSPY1Q01534 308 aa22.46■■□□□ 1.19
UPF3A-201ENST00000351487 BTBD8Q5XKL5 378 aa22.46■■□□□ 1.19
UPF3A-201ENST00000351487 AFMIDQ63HM1 303 aa22.46■■□□□ 1.19
UPF3A-201ENST00000351487 ADGRG6Q86SQ4 1221 aa22.46■■□□□ 1.19
UPF3A-201ENST00000351487 THEM5Q8N1Q8 247 aa22.46■■□□□ 1.19
UPF3A-201ENST00000351487 IPMKQ8NFU5 416 aa22.46■■□□□ 1.19
UPF3A-201ENST00000351487 HASPINQ8TF76 798 aa22.46■■□□□ 1.19
UPF3A-201ENST00000351487 STYXQ8WUJ0 223 aa22.46■■□□□ 1.19
UPF3A-201ENST00000351487 SUSD3Q96L08 255 aa22.46■■□□□ 1.19
UPF3A-201ENST00000351487 ZNF184Q99676 751 aaPredicted RBP22.46■■□□□ 1.19
UPF3A-201ENST00000351487 SLC39A8Q9C0K1 460 aa22.46■■□□□ 1.19
UPF3A-201ENST00000351487 MATN2O00339 956 aa22.45■■□□□ 1.18
UPF3A-201ENST00000351487 TNFRSF10BO14763 440 aa22.45■■□□□ 1.18
UPF3A-201ENST00000351487 ZBTB14O43829 449 aa22.45■■□□□ 1.18
UPF3A-201ENST00000351487 AHSGP02765 367 aa22.45■■□□□ 1.18
UPF3A-201ENST00000351487 ARNTP27540 789 aa22.45■■□□□ 1.18
UPF3A-201ENST00000351487 ARCN1P48444 511 aaKnown RBP22.45■■□□□ 1.18
UPF3A-201ENST00000351487 ITGA7Q13683 1181 aa22.45■■□□□ 1.18
UPF3A-201ENST00000351487 RALGPS1Q5JS13 557 aa22.45■■□□□ 1.18
UPF3A-201ENST00000351487 TIGD7Q6NT04 549 aaPredicted RBP22.45■■□□□ 1.18
UPF3A-201ENST00000351487 CENPLQ8N0S6 344 aaPredicted RBP22.45■■□□□ 1.18
UPF3A-201ENST00000351487 PPHLN1Q8NEY8 458 aaKnown RBP22.45■■□□□ 1.18
UPF3A-201ENST00000351487 FCRL2Q96LA5 508 aaPredicted RBP22.45■■□□□ 1.18
UPF3A-201ENST00000351487 FICDQ9BVA6 458 aa22.45■■□□□ 1.18
UPF3A-201ENST00000351487 ENTPD7Q9NQZ7 604 aa22.45■■□□□ 1.18
UPF3A-201ENST00000351487 NDE1Q9NXR1 346 aa22.45■■□□□ 1.18
UPF3A-201ENST00000351487 DONSONQ9NYP3 566 aa22.45■■□□□ 1.18
UPF3A-201ENST00000351487 TCAF1Q9Y4C2 921 aa22.45■■□□□ 1.18
UPF3A-201ENST00000351487 ARHGEF37A1IGU5 675 aa22.45■■□□□ 1.18
UPF3A-201ENST00000351487 CCDC78A2IDD5 438 aa22.45■■□□□ 1.18
UPF3A-201ENST00000351487 TARM1B6A8C7 271 aa22.45■■□□□ 1.18
UPF3A-201ENST00000351487 PHGDHO43175 533 aaKnown RBP22.45■■□□□ 1.18
UPF3A-201ENST00000351487 DCXO43602 365 aa22.45■■□□□ 1.18
UPF3A-201ENST00000351487 PGK1P00558 417 aa22.45■■□□□ 1.18
UPF3A-201ENST00000351487 TYMPP19971 482 aa22.45■■□□□ 1.18
UPF3A-201ENST00000351487 PSEN1P49768 467 aa22.45■■□□□ 1.18
UPF3A-201ENST00000351487 NKX3-2P78367 333 aa22.45■■□□□ 1.18
UPF3A-201ENST00000351487 NRG1Q02297 640 aaPredicted RBP22.45■■□□□ 1.18
UPF3A-201ENST00000351487 POU6F1Q14863 301 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms