RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 TROVE2P10155 538 aaKnown RBP eCLIP13.67□□□□□ -0.22
UBA3-201ENST00000349511 GNAZP19086 355 aa13.67□□□□□ -0.22
UBA3-201ENST00000349511 SERPINB6P35237 376 aa13.67□□□□□ -0.22
UBA3-201ENST00000349511 GARSP41250 739 aaKnown RBP13.67□□□□□ -0.22
UBA3-201ENST00000349511 RASSF2P50749 326 aa13.67□□□□□ -0.22
UBA3-201ENST00000349511 ZXDBP98169 803 aa13.67□□□□□ -0.22
UBA3-201ENST00000349511 CREMQ03060 361 aa13.67□□□□□ -0.22
UBA3-201ENST00000349511 WASHC5Q12768 1159 aa13.67□□□□□ -0.22
UBA3-201ENST00000349511 OVGP1Q12889 678 aa13.67□□□□□ -0.22
UBA3-201ENST00000349511 STXBP5Q5T5C0 1151 aa13.67□□□□□ -0.22
UBA3-201ENST00000349511 ZNF697Q5TEC3 545 aa13.67□□□□□ -0.22
UBA3-201ENST00000349511 SNX30Q5VWJ9 437 aa13.67□□□□□ -0.22
UBA3-201ENST00000349511 GAREM2Q75VX8 874 aa13.67□□□□□ -0.22
UBA3-201ENST00000349511 PID1Q7Z2X4 250 aa13.67□□□□□ -0.22
UBA3-201ENST00000349511 MTDHQ86UE4 582 aaKnown RBP13.67□□□□□ -0.22
UBA3-201ENST00000349511 PDIK1LQ8N165 341 aa13.67□□□□□ -0.22
UBA3-201ENST00000349511 ZNF567Q8N184 647 aa13.67□□□□□ -0.22
UBA3-201ENST00000349511 ZNF398Q8TD17 642 aa13.67□□□□□ -0.22
UBA3-201ENST00000349511 OVCA2Q8WZ82 227 aa13.67□□□□□ -0.22
UBA3-201ENST00000349511 ALKBH8Q96BT7 664 aaKnown RBP13.67□□□□□ -0.22
UBA3-201ENST00000349511 TRMT2BQ96GJ1 504 aaKnown RBP13.67□□□□□ -0.22
UBA3-201ENST00000349511 C1orf74Q96LT6 269 aa13.67□□□□□ -0.22
UBA3-201ENST00000349511 CEP295NLQ96MC4 621 aa13.67□□□□□ -0.22
UBA3-201ENST00000349511 AGAP3Q96P47 875 aa13.67□□□□□ -0.22
UBA3-201ENST00000349511 CORO1BQ9BR76 489 aa13.67□□□□□ -0.22
UBA3-201ENST00000349511 MANSC1Q9H8J5 431 aa13.67□□□□□ -0.22
UBA3-201ENST00000349511 RNPEPL1Q9HAU8 725 aa13.67□□□□□ -0.22
UBA3-201ENST00000349511 IL21Q9HBE4 155 aa13.67□□□□□ -0.22
UBA3-201ENST00000349511 BATF3Q9NR55 127 aa13.67□□□□□ -0.22
UBA3-201ENST00000349511 PIH1D1Q9NWS0 290 aaKnown RBP13.67□□□□□ -0.22
UBA3-201ENST00000349511 CHMP2BQ9UQN3 213 aa13.67□□□□□ -0.22
UBA3-201ENST00000349511 A0A1W2PRU2 124 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 TRAFD1O14545 582 aaPredicted RBP13.66□□□□□ -0.22
UBA3-201ENST00000349511 KIF1CO43896 1103 aaKnown RBP13.66□□□□□ -0.22
UBA3-201ENST00000349511 GCATO75600 419 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 MBL2P11226 248 aaPredicted RBP13.66□□□□□ -0.22
UBA3-201ENST00000349511 SLC6A4P31645 630 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 HARS2P49590 506 aaKnown RBP13.66□□□□□ -0.22
UBA3-201ENST00000349511 CLCN4P51793 760 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 ZBTB17Q13105 803 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 IGDCC3Q8IVU1 814 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 ARHGAP12Q8IWW6 846 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 ZNF683Q8IZ20 524 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 PTPRN2Q92932 1015 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 VPS11Q9H270 941 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 STK39Q9UEW8 545 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 DCTN4Q9UJW0 460 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 YBX2Q9Y2T7 364 aaKnown RBP13.66□□□□□ -0.22
UBA3-201ENST00000349511 TTLL3Q9Y4R7 772 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 DOCK4Q8N1I0 1966 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 A0A0A0MRY4 1105 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 SMAPO00193 183 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 STC2O76061 302 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 MYL4P12829 197 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 TSHRP16473 764 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 GM2AP17900 193 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 CALB2P22676 271 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 PTPN4P29074 926 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 CORO1AP31146 461 aaKnown RBP13.66□□□□□ -0.22
UBA3-201ENST00000349511 HOXC13P31276 330 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 ELK3P41970 407 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 GRIA1P42261 906 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 ZNF135P52742 658 aaPredicted RBP13.66□□□□□ -0.22
UBA3-201ENST00000349511 RING1Q06587 406 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 GALNT2Q10471 571 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 OLIG2Q13516 323 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 KCNJ11Q14654 390 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 CTC1Q2NKJ3 1217 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 CLNKQ7Z7G1 428 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 ITIH5Q86UX2 942 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 ZNF354CQ86Y25 554 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 LGI2Q8N0V4 545 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 RTL3Q8N8U3 475 aaKnown RBP13.66□□□□□ -0.22
UBA3-201ENST00000349511 ABHD8Q96I13 439 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 SPATA13Q96N96 652 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 CDK5RAP1Q96SZ6 601 aaKnown RBP13.66□□□□□ -0.22
UBA3-201ENST00000349511 ZYG11BQ9C0D3 744 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 ATXN3LQ9H3M9 355 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 SAR1AQ9NR31 198 aa13.66□□□□□ -0.22
UBA3-201ENST00000349511 KLHL8Q9P2G9 620 aaPredicted RBP13.66□□□□□ -0.22
UBA3-201ENST00000349511 HBS1LQ9Y450 684 aaKnown RBP13.66□□□□□ -0.22
UBA3-201ENST00000349511 FGF10O15520 208 aaPredicted RBP13.65□□□□□ -0.22
UBA3-201ENST00000349511 TSPAN3O60637 253 aa13.65□□□□□ -0.22
UBA3-201ENST00000349511 LPXNO60711 386 aa13.65□□□□□ -0.22
UBA3-201ENST00000349511 JCHAINP01591 159 aa13.65□□□□□ -0.22
UBA3-201ENST00000349511 MT-ND3P03897 115 aa13.65□□□□□ -0.22
UBA3-201ENST00000349511 EPCAMP16422 314 aa13.65□□□□□ -0.22
UBA3-201ENST00000349511 HDCP19113 662 aa13.65□□□□□ -0.22
UBA3-201ENST00000349511 TACR2P21452 398 aa13.65□□□□□ -0.22
UBA3-201ENST00000349511 PTPN3P26045 913 aa13.65□□□□□ -0.22
UBA3-201ENST00000349511 PSMB4P28070 264 aa13.65□□□□□ -0.22
UBA3-201ENST00000349511 COG7P83436 770 aa13.65□□□□□ -0.22
UBA3-201ENST00000349511 PPIDQ08752 370 aaKnown RBP13.65□□□□□ -0.22
UBA3-201ENST00000349511 WASHC2DQ5SRD0 308 aa13.65□□□□□ -0.22
UBA3-201ENST00000349511 LRRC6Q86X45 466 aa13.65□□□□□ -0.22
UBA3-201ENST00000349511 GPR65Q8IYL9 337 aa13.65□□□□□ -0.22
UBA3-201ENST00000349511 HDAC11Q96DB2 347 aa13.65□□□□□ -0.22
UBA3-201ENST00000349511 CYTH2Q99418 400 aa13.65□□□□□ -0.22
UBA3-201ENST00000349511 SMG9Q9H0W8 520 aaKnown RBP13.65□□□□□ -0.22
UBA3-201ENST00000349511 PRDM16Q9HAZ2 1276 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms