RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 AFF4Q9UHB7 1163 aaKnown RBP14.95□□□□□ -0.02
NUP50-201ENST00000347635 ADCY6O43306 1168 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 BAIAP3O94812 1187 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 RTN3O95197 1032 aaPredicted RBP14.95□□□□□ -0.02
NUP50-201ENST00000347635 CHRNB3Q05901 458 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 SIX1Q15475 284 aaPredicted RBP14.95□□□□□ -0.02
NUP50-201ENST00000347635 SKIV2LQ15477 1246 aaKnown RBP14.95□□□□□ -0.02
NUP50-201ENST00000347635 PAN2Q504Q3 1202 aaKnown RBP14.95□□□□□ -0.02
NUP50-201ENST00000347635 TXNRD3NBQ6F5E7 133 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 ENDOVQ8N8Q3 282 aaKnown RBP14.95□□□□□ -0.02
NUP50-201ENST00000347635 DPF3Q92784 378 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 C9orf16Q9BUW7 83 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 NCF1BA6NI72 391 aaPredicted RBP14.95□□□□□ -0.02
NUP50-201ENST00000347635 NCF1CA8MVU1 366 aaPredicted RBP14.95□□□□□ -0.02
NUP50-201ENST00000347635 MYO1GB0I1T2 1018 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 NCF1P14598 390 aaPredicted RBP14.95□□□□□ -0.02
NUP50-201ENST00000347635 GRK4P32298 578 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 TMED10P49755 219 aaKnown RBP14.95□□□□□ -0.02
NUP50-201ENST00000347635 KCTD4Q8WVF5 259 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 P2RY11Q96G91 374 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 PPP1R10Q96QC0 940 aaKnown RBP14.95□□□□□ -0.02
NUP50-201ENST00000347635 FAM8A1Q9UBU6 413 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 DMTF1Q9Y222 760 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 VPS9D1Q9Y2B5 631 aa14.95□□□□□ -0.02
NUP50-201ENST00000347635 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.94□□□□□ -0.02
NUP50-201ENST00000347635 CAPN8A6NHC0 703 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 CLOCKO15516 846 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 GLP2RO95838 553 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 VCLP18206 1134 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 NFKB1P19838 968 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 CHRM3P20309 590 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 ASPAP45381 313 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 TUFMP49411 452 aaKnown RBP14.94□□□□□ -0.02
NUP50-201ENST00000347635 FOXD4Q12950 439 aaPredicted RBP14.94□□□□□ -0.02
NUP50-201ENST00000347635 KLF1Q13351 362 aaPredicted RBP14.94□□□□□ -0.02
NUP50-201ENST00000347635 EMILIN2Q9BXX0 1053 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 SENP6Q9GZR1 1112 aaPredicted RBP14.94□□□□□ -0.02
NUP50-201ENST00000347635 ZCWPW1Q9H0M4 648 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 CAB39LQ9H9S4 337 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 CCDC88AQ3V6T2 1871 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 MYH13Q9UKX3 1938 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 MYH10P35580 1976 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 TRAFD1O14545 582 aaPredicted RBP14.94□□□□□ -0.02
NUP50-201ENST00000347635 PEX1O43933 1283 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 GCATO75600 419 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 POMCP01189 267 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 MIER2Q8N344 545 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 FAM81AQ8TBF8 368 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 CSPG4P5Q96PW8 444 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 MUC3BQ9H195 1237 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 NT5MQ9NPB1 228 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 SPAG4Q9NPE6 437 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 TLR8Q9NR97 1041 aaKnown RBP14.94□□□□□ -0.02
NUP50-201ENST00000347635 SCN3BQ9NY72 215 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 CNTNAP2Q9UHC6 1331 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 PAPSS1O43252 624 aaPredicted RBP14.94□□□□□ -0.02
NUP50-201ENST00000347635 GBE1Q04446 702 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 TRIM54Q9BYV2 358 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 RUBCNLQ9H714 662 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 TRMT6Q9UJA5 497 aaKnown RBP14.94□□□□□ -0.02
NUP50-201ENST00000347635 ZNF839A8K0R7 811 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 PRDX6P30041 224 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 ACTR3P61158 418 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 VWA5B1Q5TIE3 1220 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 FAM136AQ96C01 138 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 DACH2Q96NX9 599 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 EBF3Q9H4W6 596 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 NMRK2Q9NPI5 230 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 SCHIP1Q9P0W5 487 aaPredicted RBP14.94□□□□□ -0.02
NUP50-201ENST00000347635 AKAP11Q9UKA4 1901 aa14.94□□□□□ -0.02
NUP50-201ENST00000347635 IL1R2P27930 398 aa14.93□□□□□ -0.02
NUP50-201ENST00000347635 OSCP1Q8WVF1 389 aa14.93□□□□□ -0.02
NUP50-201ENST00000347635 FIZ1Q96SL8 496 aa14.93□□□□□ -0.02
NUP50-201ENST00000347635 MRPL45Q9BRJ2 306 aaKnown RBP14.93□□□□□ -0.02
NUP50-201ENST00000347635 THUMPD3Q9BV44 507 aaKnown RBP14.93□□□□□ -0.02
NUP50-201ENST00000347635 TKTL2Q9H0I9 626 aa14.93□□□□□ -0.02
NUP50-201ENST00000347635 MID1IP1Q9NPA3 183 aa14.93□□□□□ -0.02
NUP50-201ENST00000347635 ATXN10Q9UBB4 475 aa14.93□□□□□ -0.02
NUP50-201ENST00000347635 UXTQ9UBK9 157 aaPredicted RBP14.93□□□□□ -0.02
NUP50-201ENST00000347635 SLC30A1Q9Y6M5 507 aa14.93□□□□□ -0.02
NUP50-201ENST00000347635 UBR2Q8IWV8 1755 aa14.93□□□□□ -0.02
NUP50-201ENST00000347635 F5H5T6 163 aa14.93□□□□□ -0.02
NUP50-201ENST00000347635 MDM4O15151 490 aa14.93□□□□□ -0.02
NUP50-201ENST00000347635 TYROBPO43914 113 aa14.93□□□□□ -0.02
NUP50-201ENST00000347635 IDH3AP50213 366 aa14.93□□□□□ -0.02
NUP50-201ENST00000347635 PLK1P53350 603 aa14.93□□□□□ -0.02
NUP50-201ENST00000347635 RALGPS1Q5JS13 557 aa14.93□□□□□ -0.02
NUP50-201ENST00000347635 KIAA0319LQ8IZA0 1049 aa14.93□□□□□ -0.02
NUP50-201ENST00000347635 GALNT15Q8N3T1 639 aa14.93□□□□□ -0.02
NUP50-201ENST00000347635 ADCY4Q8NFM4 1077 aa14.93□□□□□ -0.02
NUP50-201ENST00000347635 SYTL2Q9HCH5 934 aa14.93□□□□□ -0.02
NUP50-201ENST00000347635 PDGFCQ9NRA1 345 aa14.93□□□□□ -0.02
NUP50-201ENST00000347635 RBPJLQ9UBG7 517 aa14.93□□□□□ -0.02
NUP50-201ENST00000347635 DNAJB4Q9UDY4 337 aa14.93□□□□□ -0.02
NUP50-201ENST00000347635 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.93□□□□□ -0.02
NUP50-201ENST00000347635 INPP4BO15327 924 aa14.93□□□□□ -0.02
NUP50-201ENST00000347635 PLIN3O60664 434 aa14.93□□□□□ -0.02
NUP50-201ENST00000347635 OAS1P00973 400 aaKnown RBP14.93□□□□□ -0.02
NUP50-201ENST00000347635 CSH1P0DML2 217 aa14.93□□□□□ -0.02
NUP50-201ENST00000347635 CSH2P0DML3 217 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms