RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 POLD3Q15054 466 aaPredicted RBP14.34□□□□□ -0.11
CDK5RAP1-202ENST00000346416 FAM117BQ6P1L5 589 aa14.34□□□□□ -0.11
CDK5RAP1-202ENST00000346416 PKN3Q6P5Z2 889 aa14.34□□□□□ -0.11
CDK5RAP1-202ENST00000346416 RANBP10Q6VN20 620 aa14.34□□□□□ -0.11
CDK5RAP1-202ENST00000346416 KYAT3Q6YP21 454 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP1-202ENST00000346416 ANKLE1Q8NAG6 615 aa14.34□□□□□ -0.11
CDK5RAP1-202ENST00000346416 ATP2A3Q93084 1043 aa14.34□□□□□ -0.11
CDK5RAP1-202ENST00000346416 TOP1MTQ969P6 601 aa14.34□□□□□ -0.11
CDK5RAP1-202ENST00000346416 CDK5RAP1Q96SZ6 601 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP1-202ENST00000346416 NACA2Q9H009 215 aa14.34□□□□□ -0.11
CDK5RAP1-202ENST00000346416 SLC25A51Q9H1U9 297 aa14.34□□□□□ -0.11
CDK5RAP1-202ENST00000346416 ATXN3LQ9H3M9 355 aa14.34□□□□□ -0.11
CDK5RAP1-202ENST00000346416 NT5MQ9NPB1 228 aa14.34□□□□□ -0.11
CDK5RAP1-202ENST00000346416 IARS2Q9NSE4 1012 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP1-202ENST00000346416 SIRPGQ9P1W8 387 aa14.34□□□□□ -0.11
CDK5RAP1-202ENST00000346416 HBS1LQ9Y450 684 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP1-202ENST00000346416 ZNF840PA6NDX5 716 aa14.33□□□□□ -0.11
CDK5RAP1-202ENST00000346416 SOD2P04179 222 aa14.33□□□□□ -0.11
CDK5RAP1-202ENST00000346416 ALDH3A1P30838 453 aa14.33□□□□□ -0.11
CDK5RAP1-202ENST00000346416 LIMK2P53671 638 aa14.33□□□□□ -0.11
CDK5RAP1-202ENST00000346416 MAXP61244 160 aa14.33□□□□□ -0.11
CDK5RAP1-202ENST00000346416 MPP3Q13368 585 aa14.33□□□□□ -0.11
CDK5RAP1-202ENST00000346416 PPM1JQ5JR12 505 aa14.33□□□□□ -0.11
CDK5RAP1-202ENST00000346416 STXBP5Q5T5C0 1151 aa14.33□□□□□ -0.11
CDK5RAP1-202ENST00000346416 FSTL4Q6MZW2 842 aa14.33□□□□□ -0.11
CDK5RAP1-202ENST00000346416 POTEHQ6S545 545 aa14.33□□□□□ -0.11
CDK5RAP1-202ENST00000346416 NUDCD3Q8IVD9 361 aa14.33□□□□□ -0.11
CDK5RAP1-202ENST00000346416 TRIM42Q8IWZ5 723 aa14.33□□□□□ -0.11
CDK5RAP1-202ENST00000346416 DCLK2Q8N568 766 aa14.33□□□□□ -0.11
CDK5RAP1-202ENST00000346416 PDZD8Q8NEN9 1154 aa14.33□□□□□ -0.11
CDK5RAP1-202ENST00000346416 F5H5T6 163 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 GLRA3O75311 464 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ABLIM3O94929 683 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 GJB5O95377 273 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 BPGMP07738 259 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 HMGA1P17096 107 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 CHRNA4P43681 627 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ABCG1P45844 678 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 WNT3AP56704 352 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 IRX4P78413 519 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ITKQ08881 620 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 CCDC15Q0P6D6 951 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 BNIP1Q12981 228 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 MTA1Q13330 715 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 PCSK7Q16549 785 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 PARP15Q460N3 678 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 N4BP2L1Q5TBK1 243 aaPredicted RBP14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 SNX30Q5VWJ9 437 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 PDPK2PQ6A1A2 396 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 C16orf46Q6P387 395 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 CMC1Q7Z7K0 106 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 CCDC117Q8IWD4 279 aaPredicted RBP14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 LGI2Q8N0V4 545 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 RFWD2Q8NHY2 731 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 E2F7Q96AV8 911 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 IMP4Q96G21 291 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 TMEM169Q96HH4 297 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 TRIM55Q9BYV6 548 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 CYP4F11Q9HBI6 524 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 SNX15Q9NRS6 342 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 DCDC2Q9UHG0 476 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 DCTN4Q9UJW0 460 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 EMCNQ9ULC0 261 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 CHKBQ9Y259 395 aa14.33□□□□□ -0.12
CDK5RAP1-202ENST00000346416 BIRC5O15392 142 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 DNAJC8O75937 253 aaPredicted RBP14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 IL1BP01584 269 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 SLC6A4P31645 630 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 MAPKAPK2P49137 400 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 TMPRSS15P98073 1019 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 BST1Q10588 318 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 SERINC3Q13530 473 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 SETDB1Q15047 1291 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 CHI3L2Q15782 390 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 HECTD3Q5T447 861 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 RFWD3Q6PCD5 774 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 KDELC1Q6UW63 502 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 CFAP52Q8N1V2 620 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 TEX26Q8N6G2 289 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 PPHLN1Q8NEY8 458 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ZNF398Q8TD17 642 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 NSMCE1Q8WV22 266 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 OVCA2Q8WZ82 227 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ISL2Q96A47 359 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ZNF689Q96CS4 500 aaPredicted RBP14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ZNF558Q96NG5 402 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 LRRC37BQ96QE4 947 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 MTO1Q9Y2Z2 717 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 CCDC195A0A1B0GUA6 201 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 COCHO43405 550 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ACSL4O60488 711 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 DCTN3O75935 186 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 TGDSO95455 350 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 GSRP00390 522 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 CLTBP09497 229 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 ACVRL1P37023 503 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 CD86P42081 329 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 MAGEA12P43365 314 aa14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 HARS2P49590 506 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP1-202ENST00000346416 NUMBP49757 651 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms