RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 SLC41A1Q8IVJ1 513 aa18.3■□□□□ 0.52
SMC4-201ENST00000344722 RTL3Q8N8U3 475 aaKnown RBP18.3■□□□□ 0.52
SMC4-201ENST00000344722 DNAJB14Q8TBM8 379 aa18.3■□□□□ 0.52
SMC4-201ENST00000344722 PTPRHQ9HD43 1115 aa18.3■□□□□ 0.52
SMC4-201ENST00000344722 TCRBV7S2A1N4TA0A589 114 aa18.3■□□□□ 0.52
SMC4-201ENST00000344722 RGS14O43566 566 aa18.3■□□□□ 0.52
SMC4-201ENST00000344722 CABYRO75952 493 aa18.3■□□□□ 0.52
SMC4-201ENST00000344722 VEGFAP15692 232 aaPredicted RBP18.3■□□□□ 0.52
SMC4-201ENST00000344722 FOXN2P32314 431 aa18.3■□□□□ 0.52
SMC4-201ENST00000344722 SOX10P56693 466 aa18.3■□□□□ 0.52
SMC4-201ENST00000344722 FUT2Q10981 343 aa18.3■□□□□ 0.52
SMC4-201ENST00000344722 ZFP69Q49AA0 526 aa18.3■□□□□ 0.52
SMC4-201ENST00000344722 ZPBP2Q6X784 338 aa18.3■□□□□ 0.52
SMC4-201ENST00000344722 OR52K1Q8NGK4 314 aa18.3■□□□□ 0.52
SMC4-201ENST00000344722 ING4Q9UNL4 249 aa18.3■□□□□ 0.52
SMC4-201ENST00000344722 GSTK1Q9Y2Q3 226 aa18.3■□□□□ 0.52
SMC4-201ENST00000344722 PSMB4P28070 264 aa18.3■□□□□ 0.52
SMC4-201ENST00000344722 NUP62P37198 522 aaPredicted RBP18.3■□□□□ 0.52
SMC4-201ENST00000344722 SLC5A3P53794 718 aa18.3■□□□□ 0.52
SMC4-201ENST00000344722 HADHBP55084 474 aaKnown RBP18.3■□□□□ 0.52
SMC4-201ENST00000344722 ATAD3BQ5T9A4 648 aa18.3■□□□□ 0.52
SMC4-201ENST00000344722 OR2T34Q8NGX1 318 aa18.3■□□□□ 0.52
SMC4-201ENST00000344722 OR2T3Q8NH03 318 aa18.3■□□□□ 0.52
SMC4-201ENST00000344722 PCDHB18PQ96TA0 734 aa18.3■□□□□ 0.52
SMC4-201ENST00000344722 GPATCH1Q9BRR8 931 aaKnown RBP18.3■□□□□ 0.52
SMC4-201ENST00000344722 NT5MQ9NPB1 228 aa18.3■□□□□ 0.52
SMC4-201ENST00000344722 PNMA8BQ9ULN7 279 aaPredicted RBP18.3■□□□□ 0.52
SMC4-201ENST00000344722 GPC6Q9Y625 555 aaPredicted RBP18.3■□□□□ 0.52
SMC4-201ENST00000344722 TECPR2O15040 1411 aa18.3■□□□□ 0.52
SMC4-201ENST00000344722 CLDN25C9JDP6 229 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 KCNK1O00180 336 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 PTP4A2Q12974 167 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 AHI1Q8N157 1196 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 VGLL2Q8N8G2 317 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 MINDY2Q8NBR6 621 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 WDR36Q8NI36 951 aaKnown RBP18.29■□□□□ 0.52
SMC4-201ENST00000344722 SUN5Q8TC36 379 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 ACTR8Q9H981 624 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 SEC22BO75396 215 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 CST1P01037 141 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 HOXB6P17509 224 aaKnown RBP18.29■□□□□ 0.52
SMC4-201ENST00000344722 CRADDP78560 199 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 FAM187BQ17R55 369 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 TYSND1Q2T9J0 566 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 ADGRF2Q8IZF7 708 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 TNS4Q8IZW8 715 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 TBCDQ9BTW9 1192 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 FETUBQ9UGM5 382 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 EFR3BQ9Y2G0 817 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 ARHGEF28Q8N1W1 1705 aaKnown RBP18.29■□□□□ 0.52
SMC4-201ENST00000344722 CNPP09543 421 aaKnown RBP18.29■□□□□ 0.52
SMC4-201ENST00000344722 ZNF135P52742 658 aaPredicted RBP18.29■□□□□ 0.52
SMC4-201ENST00000344722 ARHGEF7Q14155 803 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 ADGRE1Q14246 886 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 ZDHHC24Q6UX98 284 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 ARHGAP36Q6ZRI8 547 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 OR6J1Q8NGC5 347 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 PNPT1Q8TCS8 783 aaKnown RBP18.29■□□□□ 0.52
SMC4-201ENST00000344722 HGH1Q9BTY7 390 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 PXMP2Q9NR77 195 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 TMEM216Q9P0N5 145 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 TGFB1I1O43294 461 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 ADAM17P78536 824 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 PAGE2BQ5JRK9 111 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 KLHDC10Q6PID8 442 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 CNTD1Q8N815 330 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 ZNF624Q9P2J8 865 aaPredicted RBP18.29■□□□□ 0.52
SMC4-201ENST00000344722 AGLP35573 1532 aa18.29■□□□□ 0.52
SMC4-201ENST00000344722 DIP2BQ9P265 1576 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 CALCAP01258 141 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 SERPIND1P05546 499 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 CXCL8P10145 99 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 CDC42P60953 191 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 RAB10P61026 200 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 ILDR2Q71H61 639 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 TRMT13Q9NUP7 481 aaKnown RBP18.28■□□□□ 0.52
SMC4-201ENST00000344722 ING3Q9NXR8 418 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 RWDD3Q9Y3V2 267 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 CYP1B1Q16678 543 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 MILR1Q7Z6M3 343 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 EPHX4Q8IUS5 362 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 B3GALNT2Q8NCR0 500 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 HTRA1Q92743 480 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 DNAJC1Q96KC8 554 aaKnown RBP18.28■□□□□ 0.52
SMC4-201ENST00000344722 SENP6Q9GZR1 1112 aaPredicted RBP18.28■□□□□ 0.52
SMC4-201ENST00000344722 MUC13Q9H3R2 512 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 MOSPD1Q9UJG1 213 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 STXBP5LQ9Y2K9 1186 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 NRP2O60462 931 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 CCNT2O60583 730 aaKnown RBP18.28■□□□□ 0.52
SMC4-201ENST00000344722 ABCG1P45844 678 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 RAB25P57735 213 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 DNAJC14Q6Y2X3 702 aaPredicted RBP18.28■□□□□ 0.52
SMC4-201ENST00000344722 ATG4CQ96DT6 458 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 ZNF670Q9BS34 389 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 MRPL39Q9NYK5 338 aaKnown RBP18.28■□□□□ 0.52
SMC4-201ENST00000344722 TBC1D30Q9Y2I9 924 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 E5RJQ4 531 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 CREB1P16220 341 aa18.28■□□□□ 0.52
SMC4-201ENST00000344722 S100A3P33764 101 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms