RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 MCF2LO15068 1137 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 RRP8O43159 456 aaKnown RBP12.7□□□□□ -0.38
SGCA-202ENST00000344627 PLRG1O43660 514 aaKnown RBP12.7□□□□□ -0.38
SGCA-202ENST00000344627 GJB6O95452 261 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 SRCP12931 536 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 CKMT2P17540 419 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 CHRNB2P17787 502 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 SDC4P31431 198 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 DRD3P35462 400 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 CLCN6P51797 869 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 JAM2P57087 298 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 CYP4F3Q08477 520 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 CNTN1Q12860 1018 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 RTP5Q14D33 572 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 C15orf59Q2T9L4 293 aaPredicted RBP12.7□□□□□ -0.38
SGCA-202ENST00000344627 ARL13BQ3SXY8 428 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 C5orf22Q49AR2 442 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 CCDC183Q5T5S1 534 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 SFMBT2Q5VUG0 894 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 TRNP1Q6NT89 227 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 RWDD4Q6NW29 188 aaKnown RBP12.7□□□□□ -0.38
SGCA-202ENST00000344627 DHRS13Q6UX07 377 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 LRRC69Q6ZNQ3 347 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 RBM43Q6ZSC3 357 aaKnown RBP12.7□□□□□ -0.38
SGCA-202ENST00000344627 SETD3Q86TU7 594 aaPredicted RBP12.7□□□□□ -0.38
SGCA-202ENST00000344627 DCP2Q8IU60 420 aaKnown RBP12.7□□□□□ -0.38
SGCA-202ENST00000344627 DRC7Q8IY82 874 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 RFFLQ8WZ73 363 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 TSC1Q92574 1164 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 IFT43Q96FT9 208 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 PSMB7Q99436 277 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 SELENOOQ9BVL4 669 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 ZYG11BQ9C0D3 744 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 EBF2Q9HAK2 575 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 ADAM22Q9P0K1 906 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 LIMA1Q9UHB6 759 aaKnown RBP12.7□□□□□ -0.38
SGCA-202ENST00000344627 SIK3Q9Y2K2 1263 aa12.7□□□□□ -0.38
SGCA-202ENST00000344627 CAPN8A6NHC0 703 aa12.69□□□□□ -0.38
SGCA-202ENST00000344627 MBD3O95983 291 aa12.69□□□□□ -0.38
SGCA-202ENST00000344627 CYP1A1P04798 512 aaPredicted RBP12.69□□□□□ -0.38
SGCA-202ENST00000344627 MMP8P22894 467 aa12.69□□□□□ -0.38
SGCA-202ENST00000344627 GLDCP23378 1020 aa12.69□□□□□ -0.38
SGCA-202ENST00000344627 CHRNA3P32297 505 aa12.69□□□□□ -0.38
SGCA-202ENST00000344627 ABCG1P45844 678 aa12.69□□□□□ -0.38
SGCA-202ENST00000344627 NSFP46459 744 aaKnown RBP12.69□□□□□ -0.38
SGCA-202ENST00000344627 ACADVLP49748 655 aa12.69□□□□□ -0.38
SGCA-202ENST00000344627 PPP2CBP62714 309 aa12.69□□□□□ -0.38
SGCA-202ENST00000344627 PPP2CAP67775 309 aa12.69□□□□□ -0.38
SGCA-202ENST00000344627 CCDC14Q49A88 953 aa12.69□□□□□ -0.38
SGCA-202ENST00000344627 C19orf48Q6RUI8 117 aa12.69□□□□□ -0.38
SGCA-202ENST00000344627 ZNF683Q8IZ20 524 aa12.69□□□□□ -0.38
SGCA-202ENST00000344627 AOPEPQ8N6M6 819 aa12.69□□□□□ -0.38
SGCA-202ENST00000344627 DCAF4L2Q8NA75 395 aa12.69□□□□□ -0.38
SGCA-202ENST00000344627 KLK6Q92876 244 aa12.69□□□□□ -0.38
SGCA-202ENST00000344627 UBL7Q96S82 380 aaPredicted RBP12.69□□□□□ -0.38
SGCA-202ENST00000344627 TNKS2Q9H2K2 1166 aa12.69□□□□□ -0.38
SGCA-202ENST00000344627 RETREG1Q9H6L5 497 aa12.69□□□□□ -0.38
SGCA-202ENST00000344627 USP29Q9HBJ7 922 aa12.69□□□□□ -0.38
SGCA-202ENST00000344627 ATP13A1Q9HD20 1204 aa12.69□□□□□ -0.38
SGCA-202ENST00000344627 PPM1HQ9ULR3 514 aa12.69□□□□□ -0.38
SGCA-202ENST00000344627 HS3ST2Q9Y278 367 aa12.69□□□□□ -0.38
SGCA-202ENST00000344627 DAAM1Q9Y4D1 1078 aa12.69□□□□□ -0.38
SGCA-202ENST00000344627 TDRD6O60522 2096 aaKnown RBP12.68□□□□□ -0.38
SGCA-202ENST00000344627 ILVBLA1L0T0 632 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 WNT9AO14904 365 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 SMAD6O43541 496 aaKnown RBP12.68□□□□□ -0.38
SGCA-202ENST00000344627 WNT1P04628 370 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 ALPPL2P10696 532 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 KRT3P12035 628 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 ACP1P24666 158 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 SLC20A2Q08357 652 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 ZNF211Q13398 564 aaPredicted RBP12.68□□□□□ -0.38
SGCA-202ENST00000344627 SHBQ15464 509 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 CLEC16AQ2KHT3 1053 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 SOWAHCQ53LP3 525 aaPredicted RBP12.68□□□□□ -0.38
SGCA-202ENST00000344627 RAB6CQ53S08 254 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 ARSIQ5FYB1 569 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 RETSATQ6NUM9 610 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 SCYL2Q6P3W7 929 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 FBXL19Q6PCT2 694 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 ZNF783Q6ZMS7 281 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 ARCQ7LC44 396 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 ZNF354CQ86Y25 554 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 GATAD2AQ86YP4 633 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 CHST14Q8NCH0 376 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 TMIEQ8NEW7 156 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 JOSD2Q8TAC2 188 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 GRIN3AQ8TCU5 1115 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 HNRNPLLQ8WVV9 542 aaKnown RBP12.68□□□□□ -0.38
SGCA-202ENST00000344627 PCDHB18PQ96TA0 734 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 MYOCQ99972 504 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 NAT10Q9H0A0 1025 aaKnown RBP12.68□□□□□ -0.38
SGCA-202ENST00000344627 RAB6CQ9H0N0 254 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 ARHGAP20Q9P2F6 1191 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 OR12D3Q9UGF7 316 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 IL36AQ9UHA7 158 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 DNAI1Q9UI46 699 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 ATRXP46100 2492 aa12.68□□□□□ -0.38
SGCA-202ENST00000344627 IGLV3-10A0A075B6K4 115 aa12.67□□□□□ -0.38
SGCA-202ENST00000344627 ANKRD62A6NC57 917 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms