RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 TNKS2Q9H2K2 1166 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 TSPY26PQ9H489 355 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 NEU3Q9UQ49 428 aa16.41■□□□□ 0.22
ATG4B-201ENST00000344376 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.41■□□□□ 0.221e-6■■□□□ 12.3
ATG4B-201ENST00000344376 A0A1B0GVT2 93 aa16.4■□□□□ 0.22
ATG4B-201ENST00000344376 TMEM191CA6NGB0 347 aa16.4■□□□□ 0.22
ATG4B-201ENST00000344376 EIF3CLB5ME19 914 aaKnown RBP16.4■□□□□ 0.22
ATG4B-201ENST00000344376 FGF10O15520 208 aaPredicted RBP16.4■□□□□ 0.22
ATG4B-201ENST00000344376 ACVRL1P37023 503 aa16.4■□□□□ 0.22
ATG4B-201ENST00000344376 CSNK1EP49674 416 aaKnown RBP16.4■□□□□ 0.22
ATG4B-201ENST00000344376 DNA2P51530 1060 aa16.4■□□□□ 0.22
ATG4B-201ENST00000344376 RACK1P63244 317 aaKnown RBP16.4■□□□□ 0.22
ATG4B-201ENST00000344376 ARF5P84085 180 aa16.4■□□□□ 0.22
ATG4B-201ENST00000344376 CNTN1Q12860 1018 aa16.4■□□□□ 0.22
ATG4B-201ENST00000344376 FAM131CQ96AQ9 280 aa16.4■□□□□ 0.22
ATG4B-201ENST00000344376 EIF3CQ99613 913 aaKnown RBP16.4■□□□□ 0.22
ATG4B-201ENST00000344376 MAGEB5Q9BZ81 275 aa16.4■□□□□ 0.22
ATG4B-201ENST00000344376 ISCUQ9H1K1 167 aa16.4■□□□□ 0.22
ATG4B-201ENST00000344376 GAREM1Q9H706 876 aa16.4■□□□□ 0.22
ATG4B-201ENST00000344376 NDFIP2Q9NV92 336 aa16.4■□□□□ 0.22
ATG4B-201ENST00000344376 MYO1AQ9UBC5 1043 aa16.4■□□□□ 0.22
ATG4B-201ENST00000344376 IL36AQ9UHA7 158 aa16.4■□□□□ 0.22
ATG4B-201ENST00000344376 AP4E1Q9UPM8 1137 aa16.4■□□□□ 0.22
ATG4B-201ENST00000344376 NYNRINQ9P2P1 1898 aaKnown RBP16.4■□□□□ 0.22
ATG4B-201ENST00000344376 ZSCAN5CA6NGD5 496 aaPredicted RBP16.39■□□□□ 0.21
ATG4B-201ENST00000344376 PLK4O00444 970 aa16.39■□□□□ 0.21
ATG4B-201ENST00000344376 PLRG1O43660 514 aaKnown RBP16.39■□□□□ 0.21
ATG4B-201ENST00000344376 PRPSAP2O60256 369 aa16.39■□□□□ 0.21
ATG4B-201ENST00000344376 NUDT1P36639 197 aa16.39■□□□□ 0.21
ATG4B-201ENST00000344376 PI4KAP42356 2102 aa16.39■□□□□ 0.21
ATG4B-201ENST00000344376 METAP1P53582 386 aa16.39■□□□□ 0.21
ATG4B-201ENST00000344376 C21orf59P57076 290 aa16.39■□□□□ 0.21
ATG4B-201ENST00000344376 TPI1P60174 286 aa16.39■□□□□ 0.21
ATG4B-201ENST00000344376 ZNF252P-AS1Q0IIN9 211 aa16.39■□□□□ 0.21
ATG4B-201ENST00000344376 N4BP2L1Q5TBK1 243 aaPredicted RBP16.39■□□□□ 0.21
ATG4B-201ENST00000344376 HGSNATQ68CP4 663 aa16.39■□□□□ 0.21
ATG4B-201ENST00000344376 DPY19L3Q6ZPD9 716 aa16.39■□□□□ 0.21
ATG4B-201ENST00000344376 DNAAF5Q86Y56 855 aa16.39■□□□□ 0.21
ATG4B-201ENST00000344376 GRIN3AQ8TCU5 1115 aa16.39■□□□□ 0.21
ATG4B-201ENST00000344376 XPO4Q9C0E2 1151 aaKnown RBP16.39■□□□□ 0.21
ATG4B-201ENST00000344376 ANKRD6Q9Y2G4 727 aa16.39■□□□□ 0.21
ATG4B-201ENST00000344376 FCF1Q9Y324 198 aaKnown RBP16.39■□□□□ 0.21
ATG4B-201ENST00000344376 NCOR2Q9Y618 2525 aa16.39■□□□□ 0.21
ATG4B-201ENST00000344376 GYPCP04921 128 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 CTSLP07711 333 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 ZNF883P0CG24 379 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 YBEYP58557 167 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-201ENST00000344376 HNRNPDQ14103 355 aaKnown RBP16.38■□□□□ 0.21
ATG4B-201ENST00000344376 HLA-BQ31612 363 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 PARP15Q460N3 678 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 SLC45A4Q5BKX6 768 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 CARD16Q5EG05 197 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 AGBL4Q5VU57 503 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 PIP4P1Q86T03 277 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 PRPF39Q86UA1 669 aaKnown RBP16.38■□□□□ 0.21
ATG4B-201ENST00000344376 CHST14Q8NCH0 376 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 ISG20Q96AZ6 181 aaKnown RBP16.38■□□□□ 0.21
ATG4B-201ENST00000344376 HEPHQ9BQS7 1158 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 ORAI3Q9BRQ5 295 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 DHX35Q9H5Z1 703 aaKnown RBP16.38■□□□□ 0.21
ATG4B-201ENST00000344376 PREBQ9HCU5 417 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 AASDHPPTQ9NRN7 309 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 PCSK1NQ9UHG2 260 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 SLCO1B1Q9Y6L6 691 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 DOCK4Q8N1I0 1966 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 NUMA1Q14980 2115 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 WASH4PA8MWX3 477 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 GIPC1O14908 333 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 KDELR3O43731 214 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 GJB3O75712 270 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 CCNHP51946 323 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-201ENST00000344376 BNC1Q01954 994 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 TRIM14Q14142 442 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 KIF19Q2TAC6 998 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 ARSIQ5FYB1 569 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 ERMARDQ5T6L9 678 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 TRIM69Q86WT6 500 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 PSTKQ8IV42 348 aaKnown RBP16.38■□□□□ 0.21
ATG4B-201ENST00000344376 RYBPQ8N488 228 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-201ENST00000344376 CASKIN2Q8WXE0 1202 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 SERAC1Q96JX3 654 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 SLC6A18Q96N87 628 aa16.38■□□□□ 0.21
ATG4B-201ENST00000344376 SPTBN2O15020 2390 aa16.37■□□□□ 0.21
ATG4B-201ENST00000344376 RASA4BC9J798 803 aa16.37■□□□□ 0.21
ATG4B-201ENST00000344376 EEF2KO00418 725 aaKnown RBP16.37■□□□□ 0.21
ATG4B-201ENST00000344376 VILLO15195 856 aa16.37■□□□□ 0.21
ATG4B-201ENST00000344376 DAPK3O43293 454 aa16.37■□□□□ 0.21
ATG4B-201ENST00000344376 RASA4O43374 803 aa16.37■□□□□ 0.21
ATG4B-201ENST00000344376 LATO43561 262 aa16.37■□□□□ 0.21
ATG4B-201ENST00000344376 BUB1O43683 1085 aa16.37■□□□□ 0.21
ATG4B-201ENST00000344376 ZNF821O75541 412 aaPredicted RBP16.37■□□□□ 0.21
ATG4B-201ENST00000344376 LEFTY1O75610 366 aa16.37■□□□□ 0.21
ATG4B-201ENST00000344376 TPM1P09493 284 aa16.37■□□□□ 0.21
ATG4B-201ENST00000344376 CD59P13987 128 aa16.37■□□□□ 0.21
ATG4B-201ENST00000344376 CD38P28907 300 aa16.37■□□□□ 0.21
ATG4B-201ENST00000344376 MIPP30301 263 aa16.37■□□□□ 0.21
ATG4B-201ENST00000344376 CASP14P31944 242 aa16.37■□□□□ 0.21
ATG4B-201ENST00000344376 ZNF135P52742 658 aaPredicted RBP16.37■□□□□ 0.21
ATG4B-201ENST00000344376 SNRPD1P62314 119 aaKnown RBP16.37■□□□□ 0.21
ATG4B-201ENST00000344376 PPP2CBP62714 309 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms