RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 TAF1CQ15572 869 aaPredicted RBP11.04□□□□□ -0.64
RPL28-201ENST00000344063 PTRHD1Q6GMV3 140 aaKnown RBP11.04□□□□□ -0.64
RPL28-201ENST00000344063 FKBP9P1Q75LS8 142 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 CCDC80Q76M96 950 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 PLEKHH3Q7Z736 793 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 PIGZQ86VD9 579 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 SIX5Q8N196 739 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 SMARCD1Q96GM5 515 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 ACE2Q9BYF1 805 aaPredicted RBP11.04□□□□□ -0.64
RPL28-201ENST00000344063 ULBP1Q9BZM6 244 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 FAM124BQ9H5Z6 455 aaPredicted RBP11.04□□□□□ -0.64
RPL28-201ENST00000344063 ENTPD7Q9NQZ7 604 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.04□□□□□ -0.64
RPL28-201ENST00000344063 SCN3BQ9NY72 215 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 COPG2Q9UBF2 871 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 EGFL7Q9UHF1 273 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 PRPF19Q9UMS4 504 aaKnown RBP11.04□□□□□ -0.64
RPL28-201ENST00000344063 YDJCA8MPS7 323 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 TAF4O00268 1085 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 GLP2RO95838 553 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 GOT1P17174 413 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 CYP2B6P20813 491 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 IL5RAQ01344 420 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 SFT2D3Q587I9 215 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 PPM1JQ5JR12 505 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 GNASQ5JWF2 1037 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 C10orf120Q5SQS8 335 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 MARC1Q5VT66 337 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 UGT3A1Q6NUS8 523 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 STRADAQ7RTN6 431 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 LMO3Q8TAP4 145 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 RDH11Q8TC12 318 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 CCDC28BQ9BUN5 200 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 C6orf62Q9GZU0 229 aaPredicted RBP11.04□□□□□ -0.64
RPL28-201ENST00000344063 COG4Q9H9E3 785 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 LATS2Q9NRM7 1088 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 AFF4Q9UHB7 1163 aaKnown RBP11.04□□□□□ -0.64
RPL28-201ENST00000344063 TEKT2Q9UIF3 430 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 FAM95CA0A1B0GW59 222 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 ZBTB11O95625 1053 aaPredicted RBP11.04□□□□□ -0.64
RPL28-201ENST00000344063 CYP2C18P33260 490 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 MATKP42679 507 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 CHRNB3Q05901 458 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 PCID2Q5JVF3 399 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 KLHDC10Q6PID8 442 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 RNF19BQ6ZMZ0 732 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 SIAH1Q8IUQ4 282 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 P3H2Q8IVL5 708 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 TERB1Q8NA31 727 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 RP9Q8TA86 221 aaKnown RBP11.04□□□□□ -0.64
RPL28-201ENST00000344063 ZFAND2BQ8WV99 257 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 TFAP2BQ92481 460 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 PRR11Q96HE9 360 aaPredicted RBP11.04□□□□□ -0.64
RPL28-201ENST00000344063 LENG8Q96PV6 779 aaPredicted RBP11.04□□□□□ -0.64
RPL28-201ENST00000344063 TBL1YQ9BQ87 522 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 SDCBP2Q9H190 292 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 NT5MQ9NPB1 228 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 LNPEPQ9UIQ6 1025 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 PKP3Q9Y446 797 aa11.04□□□□□ -0.64
RPL28-201ENST00000344063 PKD1L3Q7Z443 1732 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 LAMA4Q16363 1823 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 A0A087X1B8 175 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 C2orf81A6NN90 581 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 TTLL13PA6NNM8 815 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 H3BSA7 217 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 GPR182O15218 404 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 PIGRP01833 764 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 HIST1H2AGP0C0S8 130 aaPredicted RBP11.03□□□□□ -0.64
RPL28-201ENST00000344063 NPR3P17342 541 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 HIST1H2ADP20671 130 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 POU5F1Q01860 360 aaKnown RBP11.03□□□□□ -0.64
RPL28-201ENST00000344063 PLCL1Q15111 1095 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 PPP1R26Q5T8A7 1209 aaPredicted RBP11.03□□□□□ -0.64
RPL28-201ENST00000344063 DEFB132Q7Z7B7 95 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 PLEKHO2Q8TD55 490 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 SLC7A6OSQ96CW6 309 aaPredicted RBP11.03□□□□□ -0.64
RPL28-201ENST00000344063 HIST1H2AHQ96KK5 128 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 LGMNQ99538 433 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 HIST1H2AJQ99878 128 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 H2AFJQ9BTM1 129 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 PDGFCQ9NRA1 345 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 SNX15Q9NRS6 342 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 RCOR3Q9P2K3 495 aaPredicted RBP11.03□□□□□ -0.64
RPL28-201ENST00000344063 TRIM43BA6NCK2 446 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 VNN1O95497 513 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 GRM5P41594 1212 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 GTF2A2P52657 109 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 GDF10P55107 478 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 ZRANB3Q5FWF4 1079 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 PIWIL4Q7Z3Z4 852 aaKnown RBP11.03□□□□□ -0.64
RPL28-201ENST00000344063 C12orf29Q8N999 325 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 MTMR14Q8NCE2 650 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 ZNF516Q92618 1163 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 COPS5Q92905 334 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 ASB2Q96Q27 587 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 ELOVL4Q9GZR5 314 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 ABHD16BQ9H3Z7 469 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 CAB39LQ9H9S4 337 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 TIMMDC1Q9NPL8 285 aa11.03□□□□□ -0.64
RPL28-201ENST00000344063 FAM149AA5PLN7 773 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms