RNA–Protein interactions for RNA: ENST00000342579.7

BPTF-204, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene BPTF, Length 4,041 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-204ENST00000342579 CLCN6P51797 869 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 GALCP54803 685 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 RPS6KA1Q15418 735 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 CCDC6Q16204 474 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 SMTNL2Q2TAL5 461 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 ESRP1Q6NXG1 681 aaKnown RBP4.28□□□□□ -1.72
BPTF-204ENST00000342579 TTC23LQ6PF05 361 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 LRRC69Q6ZNQ3 347 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 USP45Q70EL2 814 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 BEND5Q7L4P6 421 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 CIR1Q86X95 450 aaPredicted RBP4.28□□□□□ -1.72
BPTF-204ENST00000342579 PHF13Q86YI8 300 aaPredicted RBP4.28□□□□□ -1.72
BPTF-204ENST00000342579 LRRC49Q8IUZ0 686 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 WDR75Q8IWA0 830 aaKnown RBP4.28□□□□□ -1.72
BPTF-204ENST00000342579 DCAF4L2Q8NA75 395 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 TTC13Q8NBP0 860 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 SKA2Q8WVK7 121 aaPredicted RBP4.28□□□□□ -1.72
BPTF-204ENST00000342579 SORCS1Q8WY21 1168 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 SYN2Q92777 582 aaPredicted RBP4.28□□□□□ -1.72
BPTF-204ENST00000342579 SH3KBP1Q96B97 665 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 ZDHHC5Q9C0B5 715 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 CCDC68Q9H2F9 335 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 TNKS2Q9H2K2 1166 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 NHEJ1Q9H9Q4 299 aaPredicted RBP4.28□□□□□ -1.72
BPTF-204ENST00000342579 PHPT1Q9NRX4 125 aaPredicted RBP4.28□□□□□ -1.72
BPTF-204ENST00000342579 DNAJC28Q9NX36 388 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 CHCHD3Q9NX63 227 aaKnown RBP4.28□□□□□ -1.72
BPTF-204ENST00000342579 IL36AQ9UHA7 158 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 DNPEPQ9ULA0 475 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 CAPN11Q9UMQ6 739 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 ZNF148Q9UQR1 794 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 MTF2Q9Y483 593 aaPredicted RBP4.28□□□□□ -1.72
BPTF-204ENST00000342579 PCDHGA4Q9Y5G9 962 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 USP3Q9Y6I4 520 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 FAM169AQ9Y6X4 670 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 LOXHD1Q8IVV2 1947 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 A0A1B0GTH6 734 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 SHISA7A6NL88 538 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 ATMINO43313 823 aaPredicted RBP4.28□□□□□ -1.72
BPTF-204ENST00000342579 TM7SF2O76062 418 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 BPNT1O95861 308 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 ELFN1P0C7U0 828 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 FOSL1P15407 271 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 MMP8P22894 467 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 MAOBP27338 520 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 PTPN9P43378 593 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 CCT8P50990 548 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 ZNF528Q3MIS6 628 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 PPP1R15BQ5SWA1 713 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 AGAP9Q5VTM2 703 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 CDKAL1Q5VV42 579 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 CCBE1Q6UXH8 406 aaPredicted RBP4.28□□□□□ -1.72
BPTF-204ENST00000342579 Q6ZVU0 165 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 PAQR9Q6ZVX9 377 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 SCML4Q8N228 414 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 OR2T34Q8NGX1 318 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 KLK6Q92876 244 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 OSBPL1AQ9BXW6 950 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 BRINP2Q9C0B6 783 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 NT5MQ9NPB1 228 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 RBM22Q9NW64 420 aaKnown RBP eCLIP4.28□□□□□ -1.72
BPTF-204ENST00000342579 THAP10Q9P2Z0 257 aaPredicted RBP4.28□□□□□ -1.72
BPTF-204ENST00000342579 FTSJ1Q9UET6 329 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 TBK1Q9UHD2 729 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 RAPGEFL1Q9UHV5 662 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 FRMPD3Q5JV73 1810 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 C4orf47A7E2U8 309 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 RASA4BC9J798 803 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 RNF225M0QZC1 329 aaPredicted RBP4.28□□□□□ -1.72
BPTF-204ENST00000342579 RASA4O43374 803 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 SIN3BO75182 1162 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 TJP3O95049 919 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 NDUFV2P19404 249 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 BMP6P22004 513 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 AKT1P31749 480 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 L1CAMP32004 1257 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 RWDD2BP57060 319 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 SIM1P81133 766 aaPredicted RBP4.28□□□□□ -1.72
BPTF-204ENST00000342579 FOXC1Q12948 553 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 SEPT6Q14141 434 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 LLGL1Q15334 1064 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 TAF5Q15542 800 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 GEN1Q17RS7 908 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 HNRNPA1L2Q32P51 320 aaKnown RBP4.28□□□□□ -1.72
BPTF-204ENST00000342579 ARSIQ5FYB1 569 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 C1orf220Q5T0J3 134 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 DCAF12L1Q5VU92 463 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 CASC4Q6P4E1 433 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 WDR5BQ86VZ2 330 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 XYLT1Q86Y38 959 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 CDKL3Q8IVW4 592 aaPredicted RBP4.28□□□□□ -1.72
BPTF-204ENST00000342579 ZNF276Q8N554 614 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 OR6K2Q8NGY2 324 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 TMEM174Q8WUU8 243 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 RFFLQ8WZ73 363 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 PPP1R2P1Q96PQ5 205 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 CDC6Q99741 560 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 MAGEB5Q9BZ81 275 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 IMPACTQ9P2X3 320 aa4.28□□□□□ -1.72
BPTF-204ENST00000342579 EVLQ9UI08 416 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms