RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 POLR3BQ9NW08 1133 aaPredicted RBP17.21■□□□□ 0.35
CDK11B-201ENST00000340677 MSH4O15457 936 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 BRINP1O60477 761 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 SERPINI2O75830 405 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 AGR2O95994 175 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 CCNE1P24864 410 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 PRDX6P30041 224 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 ELOAQ14241 798 aaKnown RBP17.2■□□□□ 0.34
CDK11B-201ENST00000340677 SMTNL2Q2TAL5 461 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 INAVAQ3KP66 663 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 AMIGO2Q86SJ2 522 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 SETD3Q86TU7 594 aaPredicted RBP17.2■□□□□ 0.34
CDK11B-201ENST00000340677 CPXCR1Q8N123 301 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 TP53I13Q8NBR0 393 aaPredicted RBP17.2■□□□□ 0.34
CDK11B-201ENST00000340677 OR6S1Q8NH40 331 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 GRPEL2Q8TAA5 225 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 SLC5A5Q92911 643 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 EEF2KMTQ96G04 330 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 PPP1R2P1Q96PQ5 205 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 MVB12BQ9H7P6 319 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 RMND5AQ9H871 391 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 TRIM45Q9H8W5 580 aaPredicted RBP17.2■□□□□ 0.34
CDK11B-201ENST00000340677 SNX7Q9UNH6 387 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 MRPS23Q9Y3D9 190 aaKnown RBP17.2■□□□□ 0.34
CDK11B-201ENST00000340677 POTEMA6NI47 508 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 AREL1O15033 823 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 SLITRK5O94991 958 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 ZNF23P17027 643 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 NPR3P17342 541 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 MAGEA4P43358 317 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 FKBP1BP68106 108 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 CDK10Q15131 360 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 CFAP161Q6P656 301 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 RHOUQ7L0Q8 258 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 LMAN2LQ9H0V9 348 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 BLOC1S4Q9NUP1 217 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 RIC8BQ9NVN3 520 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 SLC24A2Q9UI40 661 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 PADI4Q9UM07 663 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 TRAF6Q9Y4K3 522 aa17.2■□□□□ 0.34
CDK11B-201ENST00000340677 EVPLLA8MZ36 301 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 H3BRJ5 948 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 GYG2O15488 501 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 DENRO43583 198 aaKnown RBP17.19■□□□□ 0.34
CDK11B-201ENST00000340677 GAS7O60861 476 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 GUCA1CO95843 209 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 ZNF16P17020 682 aaPredicted RBP17.19■□□□□ 0.34
CDK11B-201ENST00000340677 ALDH3B2P48448 385 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 CCNA1P78396 465 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 DMC1Q14565 340 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 SLC9C1Q4G0N8 1177 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 AADACL4Q5VUY2 407 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 SV2BQ7L1I2 683 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 CAMK1DQ8IU85 385 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 TRIM59Q8IWR1 403 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 RAD54LQ92698 747 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 SAR1AQ9NR31 198 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 RNF146Q9NTX7 359 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 ZNF624Q9P2J8 865 aaPredicted RBP17.19■□□□□ 0.34
CDK11B-201ENST00000340677 EPS15L1Q9UBC2 864 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 VAV3Q9UKW4 847 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 LCTP09848 1927 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 SNAPINO95295 136 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 MYL4P12829 197 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 ROR1Q01973 937 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 ERV3-1Q14264 604 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 LTB4RQ15722 352 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 HERC6Q8IVU3 1022 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 C4orf33Q8N1A6 199 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 POU5F2Q8N7G0 328 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 ZNF540Q8NDQ6 660 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 LRRC15Q8TF66 581 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 FAM172AQ8WUF8 416 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 LARP4BQ92615 738 aaKnown RBP17.19■□□□□ 0.34
CDK11B-201ENST00000340677 TRIM43Q96BQ3 446 aaPredicted RBP17.19■□□□□ 0.34
CDK11B-201ENST00000340677 C12orf43Q96C57 262 aaKnown RBP17.19■□□□□ 0.34
CDK11B-201ENST00000340677 ISOC1Q96CN7 298 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 MXRA8Q9BRK3 442 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 TRIM9Q9C026 710 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 MLXIPLQ9NP71 852 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 DIABLOQ9NR28 239 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 RWDD2AQ9UIY3 292 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 DNAJC12Q9UKB3 198 aa17.19■□□□□ 0.34
CDK11B-201ENST00000340677 CHRM5P08912 532 aaPredicted RBP17.18■□□□□ 0.34
CDK11B-201ENST00000340677 HTR7P34969 479 aa17.18■□□□□ 0.34
CDK11B-201ENST00000340677 CREB5Q02930 508 aa17.18■□□□□ 0.34
CDK11B-201ENST00000340677 LGALS3BPQ08380 585 aa17.18■□□□□ 0.34
CDK11B-201ENST00000340677 TOR2AQ5JU69 321 aa17.18■□□□□ 0.34
CDK11B-201ENST00000340677 ZNF618Q5T7W0 954 aa17.18■□□□□ 0.34
CDK11B-201ENST00000340677 ARHGAP11AQ6P4F7 1023 aa17.18■□□□□ 0.34
CDK11B-201ENST00000340677 RNF207Q6ZRF8 634 aa17.18■□□□□ 0.34
CDK11B-201ENST00000340677 DHDDSQ86SQ9 333 aa17.18■□□□□ 0.34
CDK11B-201ENST00000340677 PALM2Q8IXS6 379 aa17.18■□□□□ 0.34
CDK11B-201ENST00000340677 CLYBLQ8N0X4 340 aa17.18■□□□□ 0.34
CDK11B-201ENST00000340677 ANKRD35Q8N283 1001 aa17.18■□□□□ 0.34
CDK11B-201ENST00000340677 CHST13Q8NET6 341 aa17.18■□□□□ 0.34
CDK11B-201ENST00000340677 GRK7Q8WTQ7 553 aa17.18■□□□□ 0.34
CDK11B-201ENST00000340677 MARVELD3Q96A59 401 aa17.18■□□□□ 0.34
CDK11B-201ENST00000340677 MTBPQ96DY7 904 aa17.18■□□□□ 0.34
CDK11B-201ENST00000340677 B3GALT6Q96L58 329 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms