RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 SYBUQ9NX95 663 aa15.74■□□□□ 0.11
LIMS1-202ENST00000338045 MOCS1Q9NZB8 636 aa15.74■□□□□ 0.11
LIMS1-202ENST00000338045 UBP1Q9NZI7 540 aa15.74■□□□□ 0.11
LIMS1-202ENST00000338045 BFARQ9NZS9 450 aa15.74■□□□□ 0.11
LIMS1-202ENST00000338045 DPP7Q9UHL4 492 aa15.74■□□□□ 0.11
LIMS1-202ENST00000338045 HCFC2Q9Y5Z7 792 aa15.74■□□□□ 0.11
LIMS1-202ENST00000338045 ACTL7BQ9Y614 415 aa15.74■□□□□ 0.11
LIMS1-202ENST00000338045 KDELR3O43731 214 aa15.73■□□□□ 0.11
LIMS1-202ENST00000338045 SHOX2O60902 331 aaPredicted RBP15.73■□□□□ 0.11
LIMS1-202ENST00000338045 XYLBO75191 536 aa15.73■□□□□ 0.11
LIMS1-202ENST00000338045 ALDH1A2O94788 518 aa15.73■□□□□ 0.11
LIMS1-202ENST00000338045 RHOCP08134 193 aa15.73■□□□□ 0.11
LIMS1-202ENST00000338045 PGAM1P18669 254 aa15.73■□□□□ 0.11
LIMS1-202ENST00000338045 NPY2RP49146 381 aa15.73■□□□□ 0.11
LIMS1-202ENST00000338045 ATP1A2P50993 1020 aa15.73■□□□□ 0.11
LIMS1-202ENST00000338045 CRADDP78560 199 aa15.73■□□□□ 0.11
LIMS1-202ENST00000338045 CDH17Q12864 832 aa15.73■□□□□ 0.11
LIMS1-202ENST00000338045 NR1H3Q13133 447 aa15.73■□□□□ 0.11
LIMS1-202ENST00000338045 LBRQ14739 615 aaKnown RBP15.73■□□□□ 0.11
LIMS1-202ENST00000338045 TAOK1Q7L7X3 1001 aa15.73■□□□□ 0.11
LIMS1-202ENST00000338045 DCAKDQ8WVC6 231 aa15.73■□□□□ 0.11
LIMS1-202ENST00000338045 SLC44A1Q8WWI5 657 aa15.73■□□□□ 0.11
LIMS1-202ENST00000338045 TCEAL4Q96EI5 215 aa15.73■□□□□ 0.11
LIMS1-202ENST00000338045 TRIM56Q9BRZ2 755 aaKnown RBP15.73■□□□□ 0.11
LIMS1-202ENST00000338045 NT5MQ9NPB1 228 aa15.73■□□□□ 0.11
LIMS1-202ENST00000338045 GEMIN8Q9NWZ8 242 aaKnown RBP15.73■□□□□ 0.11
LIMS1-202ENST00000338045 CFAP97Q9P2B7 532 aa15.73■□□□□ 0.11
LIMS1-202ENST00000338045 TBK1Q9UHD2 729 aa15.73■□□□□ 0.11
LIMS1-202ENST00000338045 SH3BP1Q9Y3L3 701 aa15.73■□□□□ 0.11
LIMS1-202ENST00000338045 DOCK6Q96HP0 2047 aa15.73■□□□□ 0.11
LIMS1-202ENST00000338045 A6NNZ2 444 aa15.72■□□□□ 0.11
LIMS1-202ENST00000338045 LEFTY2O00292 366 aa15.72■□□□□ 0.11
LIMS1-202ENST00000338045 PAPLNO95428 1278 aa15.72■□□□□ 0.11
LIMS1-202ENST00000338045 ETFBP38117 255 aa15.72■□□□□ 0.11
LIMS1-202ENST00000338045 PBX2P40425 430 aa15.72■□□□□ 0.11
LIMS1-202ENST00000338045 MPP3Q13368 585 aa15.72■□□□□ 0.11
LIMS1-202ENST00000338045 TUBB8Q3ZCM7 444 aa15.72■□□□□ 0.11
LIMS1-202ENST00000338045 PRSS36Q5K4E3 855 aa15.72■□□□□ 0.11
LIMS1-202ENST00000338045 GPR158Q5T848 1215 aa15.72■□□□□ 0.11
LIMS1-202ENST00000338045 KDELC1Q6UW63 502 aa15.72■□□□□ 0.11
LIMS1-202ENST00000338045 PGBD5Q8N414 524 aa15.72■□□□□ 0.11
LIMS1-202ENST00000338045 DNAAF3Q8N9W5 541 aa15.72■□□□□ 0.11
LIMS1-202ENST00000338045 TMA16Q96EY4 203 aaKnown RBP15.72■□□□□ 0.11
LIMS1-202ENST00000338045 TBL1YQ9BQ87 522 aa15.72■□□□□ 0.11
LIMS1-202ENST00000338045 PRKD2Q9BZL6 878 aa15.72■□□□□ 0.11
LIMS1-202ENST00000338045 TASP1Q9H6P5 420 aa15.72■□□□□ 0.11
LIMS1-202ENST00000338045 CNOT10Q9H9A5 744 aaKnown RBP15.72■□□□□ 0.11
LIMS1-202ENST00000338045 VPS45Q9NRW7 570 aa15.72■□□□□ 0.11
LIMS1-202ENST00000338045 NOTCH4Q99466 2003 aa15.72■□□□□ 0.11
LIMS1-202ENST00000338045 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.71■□□□□ 0.11
LIMS1-202ENST00000338045 FAM159BA6NKW6 160 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 SCAMP3O14828 347 aaKnown RBP15.71■□□□□ 0.11
LIMS1-202ENST00000338045 PER2O15055 1255 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 TBL1XO60907 577 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 MMP2P08253 660 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 MSH2P43246 934 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 NIPAL4Q0D2K0 466 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 TMED2Q15363 201 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 TEAD2Q15562 447 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 SLC5A9Q2M3M2 681 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 MPP7Q5T2T1 576 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 RNF43Q68DV7 783 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 IL31Q6EBC2 164 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 ALG1LQ6GMV1 187 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 DENND5AQ6IQ26 1287 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 CASC4Q6P4E1 433 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 TRMT10BQ6PF06 316 aaKnown RBP15.71■□□□□ 0.11
LIMS1-202ENST00000338045 RANBP10Q6VN20 620 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 TMEM135Q86UB9 458 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 TRABD2AQ86V40 505 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 CCDC117Q8IWD4 279 aaPredicted RBP15.71■□□□□ 0.11
LIMS1-202ENST00000338045 BBS7Q8IWZ6 715 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 CMTM8Q8IZV2 173 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 ARRDC2Q8TBH0 407 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 TTC17Q96AE7 1141 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 ZNF707Q96C28 371 aaPredicted RBP15.71■□□□□ 0.11
LIMS1-202ENST00000338045 ABHD8Q96I13 439 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 MRGPRX2Q96LB1 330 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 APOL2Q9BQE5 337 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 CAPS2Q9BXY5 557 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 PBX4Q9BYU1 374 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 IL22Q9GZX6 179 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 LMAN2LQ9H0V9 348 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 E2F8A0AVK6 867 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 MAGEB16A2A368 324 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 TYW5A2RUC4 315 aaKnown RBP15.71■□□□□ 0.11
LIMS1-202ENST00000338045 PIAS1O75925 651 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 LUC7L3O95232 432 aaKnown RBP15.71■□□□□ 0.11
LIMS1-202ENST00000338045 OXCT1P55809 520 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 MAXP61244 160 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 FRG1Q14331 258 aaKnown RBP15.71■□□□□ 0.11
LIMS1-202ENST00000338045 RFTN1Q14699 578 aaPredicted RBP15.71■□□□□ 0.11
LIMS1-202ENST00000338045 CRYMQ14894 314 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 ARHGAP15Q53QZ3 475 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 ZNF449Q6P9G9 518 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 ADGRD2Q7Z7M1 963 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 LRRC6Q86X45 466 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 IPMKQ8NFU5 416 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 ARNT2Q9HBZ2 717 aa15.71■□□□□ 0.11
LIMS1-202ENST00000338045 SMYD2Q9NRG4 433 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms