RNA–Protein interactions for RNA: ENST00000334186.8

PPFIA3-201, Transcript of PTPRF interacting protein alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPFIA3, Length 4,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-201ENST00000334186 TPP1O14773 563 aa16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 ONECUT3O60422 494 aaPredicted RBP16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 WBP4O75554 376 aaKnown RBP16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 PARNO95453 639 aaKnown RBP16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 MAPK1P28482 360 aa16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 MTA1Q13330 715 aa16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 CENPLQ8N0S6 344 aaPredicted RBP16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 OTULINQ96BN8 352 aa16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 RMND5AQ9H871 391 aa16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 CLK4Q9HAZ1 481 aaKnown RBP16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 NAGLUP54802 743 aa16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 CBX3Q13185 183 aa16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 FBXO39Q8N4B4 442 aa16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 STX19Q8N4C7 294 aa16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 MECRQ9BV79 373 aa16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 STN1Q9H668 368 aaKnown RBP16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 ATP13A1Q9HD20 1204 aa16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 MAN1C1Q9NR34 630 aa16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 TAS2R13Q9NYV9 303 aa16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 HSMCR30P0CW71 290 aa16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 CYP2C18P33260 490 aa16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 SPANXN2Q5MJ10 180 aa16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 RETSATQ6NUM9 610 aa16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 MAGEE2Q8TD90 523 aaPredicted RBP16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 CAMKK2Q96RR4 588 aa16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 SPATA16Q9BXB7 569 aa16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 ST6GALNAC4Q9H4F1 302 aa16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 RAD21L1Q9H4I0 556 aa16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 CDHR5Q9HBB8 845 aa16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 NR2E1Q9Y466 385 aa16.7■□□□□ 0.26
PPFIA3-201ENST00000334186 A0A1B0GW55 424 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 CNOT3O75175 753 aaKnown RBP16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 DUX4L2P0CJ85 424 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 DUX4L3P0CJ86 424 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 DUX4L4P0CJ87 422 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 DUX4L5P0CJ88 424 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 DUX4L6P0CJ89 424 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 DUX4L7P0CJ90 424 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 NELFEP18615 380 aaKnown RBP16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 GRIA3P42263 894 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 CRADDP78560 199 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 FAM171A1Q5VUB5 890 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 NEPROQ6NW34 567 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 VPS33AQ96AX1 596 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 CERS2Q96G23 380 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 DEPDC7Q96QD5 511 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 EMILIN2Q9BXX0 1053 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 PRDM12Q9H4Q4 367 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 COMMD8Q9NX08 183 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 DUX4Q9UBX2 424 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 POLG2Q9UHN1 485 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 PLIN4Q96Q06 1357 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 IGLV3-22A0A075B6J6 115 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 PNMA8CA0A1B0GUJ8 204 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 PDZK1P1A8MUH7 402 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 HOXB8P17481 243 aaPredicted RBP16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 ANKS6Q68DC2 871 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 LLGL2Q6P1M3 1020 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 C6orf89Q6UWU4 347 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 RINLQ6ZS11 566 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 FAM43BQ6ZT52 329 aaPredicted RBP16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 SFRP1Q8N474 314 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 ATG16L2Q8NAA4 619 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 HELQQ8TDG4 1101 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 SOCS4Q8WXH5 440 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 RGPD1P0DJD0 1748 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 IGKV6D-41A0A0C4DH26 115 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 MANSC4A6NHS7 340 aaPredicted RBP16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 LRPAP1P30533 357 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 ABCG1P45844 678 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 PRIM2P49643 509 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 BEX3Q00994 111 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 VAC14Q08AM6 782 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 PCBP1Q15365 356 aaKnown RBP eCLIP16.69■□□□□ 0.261e-7■■■■□ 23.7
PPFIA3-201ENST00000334186 ZC3H12AQ5D1E8 599 aaKnown RBP16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 MFSD4BQ5TF39 518 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 ARL10Q8N8L6 244 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 B3GALNT2Q8NCR0 500 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 TRPM4Q8TD43 1214 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 MBOAT7Q96N66 472 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 ACTR8Q9H981 624 aa16.69■□□□□ 0.26
PPFIA3-201ENST00000334186 PSMD12O00232 456 aaPredicted RBP16.68■□□□□ 0.26
PPFIA3-201ENST00000334186 GJB1P08034 283 aa16.68■□□□□ 0.26
PPFIA3-201ENST00000334186 CCNA2P20248 432 aa16.68■□□□□ 0.26
PPFIA3-201ENST00000334186 AMIGO2Q86SJ2 522 aa16.68■□□□□ 0.26
PPFIA3-201ENST00000334186 ZDHHC13Q8IUH4 622 aa16.68■□□□□ 0.26
PPFIA3-201ENST00000334186 HERC6Q8IVU3 1022 aa16.68■□□□□ 0.26
PPFIA3-201ENST00000334186 BBS7Q8IWZ6 715 aa16.68■□□□□ 0.26
PPFIA3-201ENST00000334186 SVOPQ8N4V2 548 aa16.68■□□□□ 0.26
PPFIA3-201ENST00000334186 ABCC13Q9NSE7 274 aa16.68■□□□□ 0.26
PPFIA3-201ENST00000334186 MPP6Q9NZW5 540 aa16.68■□□□□ 0.26
PPFIA3-201ENST00000334186 PRPF19Q9UMS4 504 aaKnown RBP16.68■□□□□ 0.26
PPFIA3-201ENST00000334186 DOLKQ9UPQ8 538 aa16.68■□□□□ 0.26
PPFIA3-201ENST00000334186 FAM95CA0A1B0GW59 222 aa16.68■□□□□ 0.26
PPFIA3-201ENST00000334186 TSC22D2O75157 780 aa16.68■□□□□ 0.26
PPFIA3-201ENST00000334186 SCNN1GP51170 649 aa16.68■□□□□ 0.26
PPFIA3-201ENST00000334186 PSME3P61289 254 aa16.68■□□□□ 0.26
PPFIA3-201ENST00000334186 NAA20P61599 178 aa16.68■□□□□ 0.26
PPFIA3-201ENST00000334186 ABRAXAS1Q6UWZ7 409 aa16.68■□□□□ 0.26
PPFIA3-201ENST00000334186 OR7A2PQ8NGA2 310 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms