RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 VGLL4Q14135 290 aa23.98■■□□□ 1.43
TSKU-201ENST00000333090 USP10Q14694 798 aaKnown RBP23.98■■□□□ 1.43
TSKU-201ENST00000333090 ANO4Q32M45 955 aa23.98■■□□□ 1.43
TSKU-201ENST00000333090 GK5Q6ZS86 529 aa23.98■■□□□ 1.43
TSKU-201ENST00000333090 LSMEM2Q8N112 164 aa23.98■■□□□ 1.43
TSKU-201ENST00000333090 NUP93Q8N1F7 819 aa23.98■■□□□ 1.43
TSKU-201ENST00000333090 CNTD1Q8N815 330 aa23.98■■□□□ 1.43
TSKU-201ENST00000333090 GRIN3AQ8TCU5 1115 aa23.98■■□□□ 1.43
TSKU-201ENST00000333090 LRTOMTQ8WZ04 291 aa23.98■■□□□ 1.43
TSKU-201ENST00000333090 UNKQ9C0B0 810 aaKnown RBP23.98■■□□□ 1.43
TSKU-201ENST00000333090 IL22Q9GZX6 179 aa23.98■■□□□ 1.43
TSKU-201ENST00000333090 KCNU1A8MYU2 1149 aa23.97■■□□□ 1.43
TSKU-201ENST00000333090 CSE1LP55060 971 aaKnown RBP23.97■■□□□ 1.43
TSKU-201ENST00000333090 RFTN1Q14699 578 aaPredicted RBP23.97■■□□□ 1.43
TSKU-201ENST00000333090 ANKRD52Q8NB46 1076 aa23.97■■□□□ 1.43
TSKU-201ENST00000333090 TRPV6Q9H1D0 765 aa23.97■■□□□ 1.43
TSKU-201ENST00000333090 ZNF23P17027 643 aa23.97■■□□□ 1.43
TSKU-201ENST00000333090 GLRA4Q5JXX5 417 aa23.97■■□□□ 1.43
TSKU-201ENST00000333090 MOB2Q70IA6 237 aa23.97■■□□□ 1.43
TSKU-201ENST00000333090 FBXO16Q8IX29 292 aaPredicted RBP23.97■■□□□ 1.43
TSKU-201ENST00000333090 FSTL5Q8N475 847 aaPredicted RBP23.97■■□□□ 1.43
TSKU-201ENST00000333090 RDH11Q8TC12 318 aa23.97■■□□□ 1.43
TSKU-201ENST00000333090 LZICQ8WZA0 190 aa23.97■■□□□ 1.43
TSKU-201ENST00000333090 IRGQQ8WZA9 623 aa23.97■■□□□ 1.43
TSKU-201ENST00000333090 ASB9Q96DX5 294 aa23.97■■□□□ 1.43
TSKU-201ENST00000333090 C1QTNF1Q9BXJ1 281 aa23.97■■□□□ 1.43
TSKU-201ENST00000333090 SUDS3Q9H7L9 328 aaPredicted RBP23.97■■□□□ 1.43
TSKU-201ENST00000333090 CNOT11Q9UKZ1 510 aaKnown RBP23.97■■□□□ 1.43
TSKU-201ENST00000333090 SLCO1B7G3V0H7 640 aa23.97■■□□□ 1.43
TSKU-201ENST00000333090 DDHD2O94830 711 aa23.97■■□□□ 1.43
TSKU-201ENST00000333090 INSRRP14616 1297 aa23.97■■□□□ 1.43
TSKU-201ENST00000333090 HK2P52789 917 aa23.97■■□□□ 1.43
TSKU-201ENST00000333090 NME3Q13232 169 aa23.97■■□□□ 1.43
TSKU-201ENST00000333090 SLC25A52Q3SY17 297 aa23.97■■□□□ 1.43
TSKU-201ENST00000333090 KRT80Q6KB66 452 aa23.97■■□□□ 1.43
TSKU-201ENST00000333090 RIOX2Q8IUF8 465 aa23.97■■□□□ 1.43
TSKU-201ENST00000333090 MYO1HQ8N1T3 1032 aa23.97■■□□□ 1.43
TSKU-201ENST00000333090 APBA2Q99767 749 aa23.97■■□□□ 1.43
TSKU-201ENST00000333090 FIS1Q9Y3D6 152 aa23.97■■□□□ 1.43
TSKU-201ENST00000333090 SNX13Q9Y5W8 968 aa23.97■■□□□ 1.43
TSKU-201ENST00000333090 EEF2KO00418 725 aaKnown RBP23.96■■□□□ 1.43
TSKU-201ENST00000333090 PSME3P61289 254 aa23.96■■□□□ 1.43
TSKU-201ENST00000333090 ARHGAP17Q68EM7 881 aa23.96■■□□□ 1.43
TSKU-201ENST00000333090 TRIM74Q86UV6 250 aa23.96■■□□□ 1.43
TSKU-201ENST00000333090 TRIM73Q86UV7 250 aa23.96■■□□□ 1.43
TSKU-201ENST00000333090 SPATA6LQ8N4H0 392 aa23.96■■□□□ 1.43
TSKU-201ENST00000333090 TMEM79Q9BSE2 394 aa23.96■■□□□ 1.43
TSKU-201ENST00000333090 CASS4Q9NQ75 786 aa23.96■■□□□ 1.43
TSKU-201ENST00000333090 ZNF638Q14966 1978 aaKnown RBP23.96■■□□□ 1.43
TSKU-201ENST00000333090 ZBTB24O43167 697 aaPredicted RBP23.96■■□□□ 1.43
TSKU-201ENST00000333090 IKBKEQ14164 716 aa23.96■■□□□ 1.43
TSKU-201ENST00000333090 DGKDQ16760 1214 aa23.96■■□□□ 1.43
TSKU-201ENST00000333090 GADL1Q6ZQY3 521 aa23.96■■□□□ 1.43
TSKU-201ENST00000333090 LPCAT2Q7L5N7 544 aa23.96■■□□□ 1.43
TSKU-201ENST00000333090 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.96■■□□□ 1.43
TSKU-201ENST00000333090 OMDQ99983 421 aa23.96■■□□□ 1.43
TSKU-201ENST00000333090 UBP1Q9NZI7 540 aa23.96■■□□□ 1.43
TSKU-201ENST00000333090 XPR1Q9UBH6 696 aa23.96■■□□□ 1.43
TSKU-201ENST00000333090 TUBGCP4Q9UGJ1 667 aa23.96■■□□□ 1.43
TSKU-201ENST00000333090 CITO14578 2027 aa23.95■■□□□ 1.43
TSKU-201ENST00000333090 USP2O75604 605 aaPredicted RBP23.95■■□□□ 1.42
TSKU-201ENST00000333090 H6PDO95479 791 aa23.95■■□□□ 1.42
TSKU-201ENST00000333090 NMBRP28336 390 aa23.95■■□□□ 1.42
TSKU-201ENST00000333090 TRIM25Q14258 630 aaKnown RBP23.95■■□□□ 1.42
TSKU-201ENST00000333090 ZNF460Q14592 562 aa23.95■■□□□ 1.42
TSKU-201ENST00000333090 LPIN1Q14693 890 aa23.95■■□□□ 1.42
TSKU-201ENST00000333090 NLGN2Q8NFZ4 835 aa23.95■■□□□ 1.42
TSKU-201ENST00000333090 ZNF597Q96LX8 424 aa23.95■■□□□ 1.42
TSKU-201ENST00000333090 ZMAT2Q96NC0 199 aaKnown RBP23.95■■□□□ 1.42
TSKU-201ENST00000333090 GPR22Q99680 433 aa23.95■■□□□ 1.42
TSKU-201ENST00000333090 SETD4Q9NVD3 440 aa23.95■■□□□ 1.42
TSKU-201ENST00000333090 C9IYK1 514 aa23.95■■□□□ 1.42
TSKU-201ENST00000333090 E7ENX8 843 aa23.95■■□□□ 1.42
TSKU-201ENST00000333090 MAGEB3O15480 346 aa23.95■■□□□ 1.42
TSKU-201ENST00000333090 DLX3O60479 287 aa23.95■■□□□ 1.42
TSKU-201ENST00000333090 LMO2P25791 158 aa23.95■■□□□ 1.42
TSKU-201ENST00000333090 SLC26A2P50443 739 aa23.95■■□□□ 1.42
TSKU-201ENST00000333090 RALGDSQ12967 914 aa23.95■■□□□ 1.42
TSKU-201ENST00000333090 PDAP1Q13442 181 aaKnown RBP23.95■■□□□ 1.42
TSKU-201ENST00000333090 KYAT1Q16773 422 aa23.95■■□□□ 1.42
TSKU-201ENST00000333090 EML3Q32P44 896 aa23.95■■□□□ 1.42
TSKU-201ENST00000333090 SLC2A14Q8TDB8 520 aa23.95■■□□□ 1.42
TSKU-201ENST00000333090 SPATC1LQ9H0A9 340 aa23.95■■□□□ 1.42
TSKU-201ENST00000333090 PCDHGA7Q9Y5G6 932 aa23.95■■□□□ 1.42
TSKU-201ENST00000333090 CEP350Q5VT06 3117 aa23.94■■□□□ 1.42
TSKU-201ENST00000333090 SLC35E2BP0CK96 405 aa23.94■■□□□ 1.42
TSKU-201ENST00000333090 TXNL4AP83876 142 aaKnown RBP23.94■■□□□ 1.42
TSKU-201ENST00000333090 DPYSQ14117 519 aa23.94■■□□□ 1.42
TSKU-201ENST00000333090 MTX3Q5HYI7 312 aa23.94■■□□□ 1.42
TSKU-201ENST00000333090 ZC3HC1Q86WB0 502 aaKnown RBP23.94■■□□□ 1.42
TSKU-201ENST00000333090 STYXQ8WUJ0 223 aa23.94■■□□□ 1.42
TSKU-201ENST00000333090 CIB1Q99828 191 aa23.94■■□□□ 1.42
TSKU-201ENST00000333090 OSBPL11Q9BXB4 747 aa23.94■■□□□ 1.42
TSKU-201ENST00000333090 ANKRD6Q9Y2G4 727 aa23.94■■□□□ 1.42
TSKU-201ENST00000333090 M0QYT0 321 aa23.94■■□□□ 1.42
TSKU-201ENST00000333090 SCNN1AP37088 669 aa23.94■■□□□ 1.42
TSKU-201ENST00000333090 PAFAH1B3Q15102 231 aaKnown RBP23.94■■□□□ 1.42
TSKU-201ENST00000333090 CYP2R1Q6VVX0 501 aa23.94■■□□□ 1.42
TSKU-201ENST00000333090 NT5DC4Q86YG4 428 aa23.94■■□□□ 1.42
TSKU-201ENST00000333090 ERI1Q8IV48 349 aaKnown RBP23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms