RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 DMWDQ09019 674 aa26.43■■□□□ 1.82
SMDT1-201ENST00000331479 CYTH1Q15438 398 aa26.43■■□□□ 1.82
SMDT1-201ENST00000331479 INO80DQ53TQ3 878 aaPredicted RBP26.43■■□□□ 1.82
SMDT1-201ENST00000331479 ANO7Q6IWH7 933 aa26.43■■□□□ 1.82
SMDT1-201ENST00000331479 CEP44Q9C0F1 390 aa26.43■■□□□ 1.82
SMDT1-201ENST00000331479 MKRN2Q9H000 416 aaKnown RBP26.43■■□□□ 1.82
SMDT1-201ENST00000331479 POLMQ9NP87 494 aaPredicted RBP26.43■■□□□ 1.82
SMDT1-201ENST00000331479 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.43■■□□□ 1.82
SMDT1-201ENST00000331479 TARSL2A2RTX5 802 aaKnown RBP26.42■■□□□ 1.82
SMDT1-201ENST00000331479 BNIP3LO60238 219 aa26.42■■□□□ 1.82
SMDT1-201ENST00000331479 ANGPT1Q15389 498 aa26.42■■□□□ 1.82
SMDT1-201ENST00000331479 LRRC49Q8IUZ0 686 aa26.42■■□□□ 1.82
SMDT1-201ENST00000331479 SHROOM3Q8TF72 1996 aa26.42■■□□□ 1.82
SMDT1-201ENST00000331479 HMGB4Q8WW32 186 aa26.42■■□□□ 1.82
SMDT1-201ENST00000331479 LGMNQ99538 433 aa26.42■■□□□ 1.82
SMDT1-201ENST00000331479 CARD9Q9H257 536 aa26.42■■□□□ 1.82
SMDT1-201ENST00000331479 APBB3O95704 486 aa26.41■■□□□ 1.82
SMDT1-201ENST00000331479 ATP1A1P05023 1023 aaKnown RBP26.41■■□□□ 1.82
SMDT1-201ENST00000331479 GABRG2P18507 467 aa26.41■■□□□ 1.82
SMDT1-201ENST00000331479 MX2P20592 715 aa26.41■■□□□ 1.82
SMDT1-201ENST00000331479 NR2C2P49116 596 aa26.41■■□□□ 1.82
SMDT1-201ENST00000331479 NUBP1P53384 320 aa26.41■■□□□ 1.82
SMDT1-201ENST00000331479 HS1BP3Q53T59 392 aa26.41■■□□□ 1.82
SMDT1-201ENST00000331479 B4GALNT4Q76KP1 1039 aa26.41■■□□□ 1.82
SMDT1-201ENST00000331479 STK40Q8N2I9 435 aa26.41■■□□□ 1.82
SMDT1-201ENST00000331479 CAMKK1Q8N5S9 505 aa26.41■■□□□ 1.82
SMDT1-201ENST00000331479 MDGA1Q8NFP4 955 aa26.41■■□□□ 1.82
SMDT1-201ENST00000331479 OR2A12Q8NGT7 310 aa26.41■■□□□ 1.82
SMDT1-201ENST00000331479 OR2T3Q8NH03 318 aa26.41■■□□□ 1.82
SMDT1-201ENST00000331479 P3H4Q92791 437 aa26.41■■□□□ 1.82
SMDT1-201ENST00000331479 HDAC11Q96DB2 347 aa26.41■■□□□ 1.82
SMDT1-201ENST00000331479 TSGA13Q96PP4 275 aa26.41■■□□□ 1.82
SMDT1-201ENST00000331479 FAM129BQ96TA1 746 aa26.41■■□□□ 1.82
SMDT1-201ENST00000331479 TM6SF2Q9BZW4 377 aa26.41■■□□□ 1.82
SMDT1-201ENST00000331479 TCRBV7S2A1N4TA0A589 114 aa26.41■■□□□ 1.82
SMDT1-201ENST00000331479 TJP3O95049 919 aa26.41■■□□□ 1.82
SMDT1-201ENST00000331479 CXCR5P32302 372 aa26.41■■□□□ 1.82
SMDT1-201ENST00000331479 GNG11P61952 73 aa26.41■■□□□ 1.82
SMDT1-201ENST00000331479 SLC10A7Q0GE19 358 aa26.41■■□□□ 1.82
SMDT1-201ENST00000331479 CCNYQ8ND76 341 aa26.41■■□□□ 1.82
SMDT1-201ENST00000331479 CASKIN2Q8WXE0 1202 aa26.41■■□□□ 1.82
SMDT1-201ENST00000331479 ISG20Q96AZ6 181 aaKnown RBP26.41■■□□□ 1.82
SMDT1-201ENST00000331479 MRGPRX1Q96LB2 322 aa26.41■■□□□ 1.82
SMDT1-201ENST00000331479 WDR24Q96S15 920 aa26.41■■□□□ 1.82
SMDT1-201ENST00000331479 FBXO4Q9UKT5 387 aa26.41■■□□□ 1.82
SMDT1-201ENST00000331479 USP34Q70CQ2 3546 aa26.4■■□□□ 1.82
SMDT1-201ENST00000331479 APOC4-APOC2K7ER74 178 aa26.4■■□□□ 1.82
SMDT1-201ENST00000331479 APOC2P02655 101 aa26.4■■□□□ 1.82
SMDT1-201ENST00000331479 NDUFV2P19404 249 aa26.4■■□□□ 1.82
SMDT1-201ENST00000331479 KLF1Q13351 362 aaPredicted RBP26.4■■□□□ 1.82
SMDT1-201ENST00000331479 SEL1L2Q5TEA6 688 aa26.4■■□□□ 1.82
SMDT1-201ENST00000331479 HEATR6Q6AI08 1181 aaKnown RBP26.4■■□□□ 1.82
SMDT1-201ENST00000331479 CACUL1Q86Y37 369 aa26.4■■□□□ 1.82
SMDT1-201ENST00000331479 PCDH20Q8N6Y1 951 aaKnown RBP26.4■■□□□ 1.82
SMDT1-201ENST00000331479 TRIM44Q96DX7 344 aaPredicted RBP26.4■■□□□ 1.82
SMDT1-201ENST00000331479 ZNF419Q96HQ0 510 aaPredicted RBP26.4■■□□□ 1.82
SMDT1-201ENST00000331479 ZNF599Q96NL3 588 aa26.4■■□□□ 1.82
SMDT1-201ENST00000331479 LHX3Q9UBR4 397 aa26.4■■□□□ 1.82
SMDT1-201ENST00000331479 CCNCP24863 283 aa26.39■■□□□ 1.82
SMDT1-201ENST00000331479 MSNP26038 577 aaKnown RBP26.39■■□□□ 1.82
SMDT1-201ENST00000331479 PPIDQ08752 370 aaKnown RBP26.39■■□□□ 1.82
SMDT1-201ENST00000331479 LBRQ14739 615 aaKnown RBP26.39■■□□□ 1.82
SMDT1-201ENST00000331479 PDK1Q15118 436 aa26.39■■□□□ 1.82
SMDT1-201ENST00000331479 FAM182AQ5T1J6 154 aa26.39■■□□□ 1.82
SMDT1-201ENST00000331479 TMCO4Q5TGY1 634 aa26.39■■□□□ 1.82
SMDT1-201ENST00000331479 CCDC181Q5TID7 509 aa26.39■■□□□ 1.82
SMDT1-201ENST00000331479 DPY19L3Q6ZPD9 716 aa26.39■■□□□ 1.82
SMDT1-201ENST00000331479 METTL3Q86U44 580 aaKnown RBP26.39■■□□□ 1.82
SMDT1-201ENST00000331479 RASSF3Q86WH2 238 aa26.39■■□□□ 1.82
SMDT1-201ENST00000331479 TMPRSS6Q8IU80 811 aa26.39■■□□□ 1.82
SMDT1-201ENST00000331479 TSEN2Q8NCE0 465 aaKnown RBP26.39■■□□□ 1.82
SMDT1-201ENST00000331479 CHST14Q8NCH0 376 aa26.39■■□□□ 1.82
SMDT1-201ENST00000331479 EXOC2Q96KP1 924 aa26.39■■□□□ 1.82
SMDT1-201ENST00000331479 FAM118BQ9BPY3 351 aa26.39■■□□□ 1.82
SMDT1-201ENST00000331479 ALDH1A2O94788 518 aa26.38■■□□□ 1.81
SMDT1-201ENST00000331479 HOXA6P31267 233 aa26.38■■□□□ 1.81
SMDT1-201ENST00000331479 RHOAP61586 193 aa26.38■■□□□ 1.81
SMDT1-201ENST00000331479 ELAVL3Q14576 367 aaKnown RBP26.38■■□□□ 1.81
SMDT1-201ENST00000331479 RFTN1Q14699 578 aaPredicted RBP26.38■■□□□ 1.81
SMDT1-201ENST00000331479 CARD16Q5EG05 197 aa26.38■■□□□ 1.81
SMDT1-201ENST00000331479 ATXN7L2Q5T6C5 722 aaPredicted RBP26.38■■□□□ 1.81
SMDT1-201ENST00000331479 ACTL9Q8TC94 416 aa26.38■■□□□ 1.81
SMDT1-201ENST00000331479 RSPH9Q9H1X1 276 aaPredicted RBP26.38■■□□□ 1.81
SMDT1-201ENST00000331479 BCCIPQ9P287 314 aaKnown RBP eCLIP26.38■■□□□ 1.81
SMDT1-201ENST00000331479 MUSKO15146 869 aa26.37■■□□□ 1.81
SMDT1-201ENST00000331479 MATN3O15232 486 aa26.37■■□□□ 1.81
SMDT1-201ENST00000331479 SP9P0CG40 484 aa26.37■■□□□ 1.81
SMDT1-201ENST00000331479 OTUD4Q01804 1114 aaKnown RBP26.37■■□□□ 1.81
SMDT1-201ENST00000331479 AP1B1Q10567 949 aa26.37■■□□□ 1.81
SMDT1-201ENST00000331479 TIGD7Q6NT04 549 aaPredicted RBP26.37■■□□□ 1.81
SMDT1-201ENST00000331479 BZW1Q7L1Q6 419 aaKnown RBP26.37■■□□□ 1.81
SMDT1-201ENST00000331479 ZC3H18Q86VM9 953 aaKnown RBP26.37■■□□□ 1.81
SMDT1-201ENST00000331479 SLC13A5Q86YT5 568 aaPredicted RBP26.37■■□□□ 1.81
SMDT1-201ENST00000331479 CCDC13Q8IYE1 715 aa26.37■■□□□ 1.81
SMDT1-201ENST00000331479 PGBD3Q8N328 593 aa26.37■■□□□ 1.81
SMDT1-201ENST00000331479 OR6K2Q8NGY2 324 aa26.37■■□□□ 1.81
SMDT1-201ENST00000331479 MAML1Q92585 1016 aa26.37■■□□□ 1.81
SMDT1-201ENST00000331479 TPSD1Q9BZJ3 242 aa26.37■■□□□ 1.81
SMDT1-201ENST00000331479 EBF1Q9UH73 591 aa26.37■■□□□ 1.81
SMDT1-201ENST00000331479 ZKSCAN5Q9Y2L8 839 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms