RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 HOXD9P28356 352 aaPredicted RBP9.69□□□□□ -0.86
C11orf54-201ENST00000331239 IFI35P80217 286 aaPredicted RBP9.69□□□□□ -0.86
C11orf54-201ENST00000331239 GNA12Q03113 381 aa9.69□□□□□ -0.86
C11orf54-201ENST00000331239 CBLBQ13191 982 aa9.69□□□□□ -0.86
C11orf54-201ENST00000331239 SERINC3Q13530 473 aa9.69□□□□□ -0.86
C11orf54-201ENST00000331239 HNRNPDQ14103 355 aaKnown RBP9.69□□□□□ -0.86
C11orf54-201ENST00000331239 POLD3Q15054 466 aaPredicted RBP9.69□□□□□ -0.86
C11orf54-201ENST00000331239 EIF4HQ15056 248 aaKnown RBP9.69□□□□□ -0.86
C11orf54-201ENST00000331239 LLGL1Q15334 1064 aa9.69□□□□□ -0.86
C11orf54-201ENST00000331239 INO80DQ53TQ3 878 aaPredicted RBP9.69□□□□□ -0.86
C11orf54-201ENST00000331239 FBXW10Q5XX13 1052 aa9.69□□□□□ -0.86
C11orf54-201ENST00000331239 KAZNQ674X7 775 aa9.69□□□□□ -0.86
C11orf54-201ENST00000331239 TANGO2Q6ICL3 276 aa9.69□□□□□ -0.86
C11orf54-201ENST00000331239 POTEHQ6S545 545 aa9.69□□□□□ -0.86
C11orf54-201ENST00000331239 ARHGAP12Q8IWW6 846 aa9.69□□□□□ -0.86
C11orf54-201ENST00000331239 PLPP6Q8IY26 295 aa9.69□□□□□ -0.86
C11orf54-201ENST00000331239 GPATCH11Q8N954 259 aa9.69□□□□□ -0.86
C11orf54-201ENST00000331239 DCAF4L2Q8NA75 395 aa9.69□□□□□ -0.86
C11orf54-201ENST00000331239 UHMK1Q8TAS1 419 aaKnown RBP9.69□□□□□ -0.86
C11orf54-201ENST00000331239 DDI1Q8WTU0 396 aa9.69□□□□□ -0.86
C11orf54-201ENST00000331239 NSMCE1Q8WV22 266 aa9.69□□□□□ -0.86
C11orf54-201ENST00000331239 ATXN2LQ8WWM7 1075 aaKnown RBP9.69□□□□□ -0.86
C11orf54-201ENST00000331239 MAML1Q92585 1016 aa9.69□□□□□ -0.86
C11orf54-201ENST00000331239 WBP2Q969T9 261 aa9.69□□□□□ -0.86
C11orf54-201ENST00000331239 C2orf49Q9BVC5 232 aaPredicted RBP9.69□□□□□ -0.86
C11orf54-201ENST00000331239 TMPRSS4Q9NRS4 437 aa9.69□□□□□ -0.86
C11orf54-201ENST00000331239 COL6A3P12111 3177 aa9.69□□□□□ -0.86
C11orf54-201ENST00000331239 LOC730098B7Z3J9 87 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 RASA4BC9J798 803 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 MATN3O15232 486 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 RASA4O43374 803 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 OPHN1O60890 802 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 RHOCP08134 193 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 RBP3P10745 1247 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 ADH5P11766 374 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 RENBPP51606 427 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 ACTN3Q08043 901 aaPredicted RBP9.68□□□□□ -0.86
C11orf54-201ENST00000331239 PTK6Q13882 451 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 RHBDF2Q6PJF5 856 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 CCDC13Q8IYE1 715 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 BBS5Q8N3I7 341 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 ALLCQ8N6M5 410 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 CCDC89Q8N998 374 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 ATG4AQ8WYN0 398 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 ARHGEF2Q92974 986 aaKnown RBP9.68□□□□□ -0.86
C11orf54-201ENST00000331239 TTC17Q96AE7 1141 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 SNF8Q96H20 258 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 CDC42EP4Q9H3Q1 356 aaKnown RBP9.68□□□□□ -0.86
C11orf54-201ENST00000331239 ACTR5Q9H9F9 607 aaPredicted RBP9.68□□□□□ -0.86
C11orf54-201ENST00000331239 SLC2A4RGQ9NR83 387 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 H0Y626 953 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 PSMD3O43242 534 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 PRAMEF11O60813 436 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 SLCO1A2P46721 670 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 SNX1Q13596 522 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 CDH18Q13634 790 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 RUNX3Q13761 415 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 ITPRIPL2Q3MIP1 535 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 ALFQ53S48 1182 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 TNFAIP8L3Q5GJ75 292 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 CXorf57Q6NSI4 855 aaKnown RBP9.68□□□□□ -0.86
C11orf54-201ENST00000331239 RETSATQ6NUM9 610 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 EP400NLQ6ZTU2 488 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 TAOK1Q7L7X3 1001 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 PCGF5Q86SE9 256 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 AHI1Q8N157 1196 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 ATPAF2Q8N5M1 289 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 TEX26Q8N6G2 289 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 RSPRY1Q96DX4 576 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 FAM161BQ96MY7 647 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 HERPUD2Q9BSE4 406 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 FRMD8Q9BZ67 464 aaPredicted RBP9.68□□□□□ -0.86
C11orf54-201ENST00000331239 ROPN1BQ9BZX4 212 aaPredicted RBP9.68□□□□□ -0.86
C11orf54-201ENST00000331239 NOL6Q9H6R4 1146 aaKnown RBP9.68□□□□□ -0.86
C11orf54-201ENST00000331239 ECT2Q9H8V3 914 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 ROPN1Q9HAT0 212 aaPredicted RBP9.68□□□□□ -0.86
C11orf54-201ENST00000331239 PCDH9Q9HC56 1237 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 INTS9Q9NV88 658 aaKnown RBP9.68□□□□□ -0.86
C11orf54-201ENST00000331239 OR51B4Q9Y5P0 310 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 KIAA1549LQ6ZVL6 1849 aa9.68□□□□□ -0.86
C11orf54-201ENST00000331239 TP73O15350 636 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 MFSD11O43934 449 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 CNTN5O94779 1100 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 CYP17A1P05093 508 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 ITIH2P19823 946 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 VIPR2P41587 438 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 CSNK1DP48730 415 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 RPS24P62847 133 aaKnown RBP9.67□□□□□ -0.86
C11orf54-201ENST00000331239 CAV1Q03135 178 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 SLC10A2Q12908 348 aaPredicted RBP9.67□□□□□ -0.86
C11orf54-201ENST00000331239 SKIV2LQ15477 1246 aaKnown RBP9.67□□□□□ -0.86
C11orf54-201ENST00000331239 HEATR6Q6AI08 1181 aaKnown RBP9.67□□□□□ -0.86
C11orf54-201ENST00000331239 ITPRIPL1Q6GPH6 555 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 PTCRAQ6ISU1 281 aaPredicted RBP9.67□□□□□ -0.86
C11orf54-201ENST00000331239 RFWD3Q6PCD5 774 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 DARS2Q6PI48 645 aaKnown RBP9.67□□□□□ -0.86
C11orf54-201ENST00000331239 CEP128Q6ZU80 1094 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 Q7L0L9 218 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 EGFL6Q8IUX8 553 aa9.67□□□□□ -0.86
C11orf54-201ENST00000331239 MFN1Q8IWA4 741 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms