RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 NOMO3P69849 1222 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 ABRQ12979 859 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 USP41Q3LFD5 358 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 CXorf40AQ8TE69 158 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 BBS4Q96RK4 519 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 THAP1Q9NVV9 213 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 PDP2Q9P2J9 529 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 LIMD1Q9UGP4 676 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 N6AMT1Q9Y5N5 214 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 SNX10Q9Y5X0 201 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 MRC1P22897 1456 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 ROBO1Q9Y6N7 1651 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 PIGNO95427 931 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 NUDT14O95848 222 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 TNS4Q8IZW8 715 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 C4orf32Q8N8J7 132 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 MCOLN3Q8TDD5 553 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 OXNAD1Q96HP4 312 aaPredicted RBP10.31□□□□□ -0.76
CHD3-201ENST00000330494 KREMEN1Q96MU8 473 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 BTRCQ9Y297 605 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 BAZ2AQ9UIF9 1905 aaKnown RBP10.31□□□□□ -0.76
CHD3-201ENST00000330494 NEDD8-MDP1E9PL57 170 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 RNF225M0QZC1 329 aaPredicted RBP10.31□□□□□ -0.76
CHD3-201ENST00000330494 MTA2O94776 668 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 CAPN1P07384 714 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 GABRR2P28476 465 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 EIF2B2P49770 351 aaKnown RBP10.31□□□□□ -0.76
CHD3-201ENST00000330494 DEFA1P59665 94 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 DEFA3P59666 94 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 ACAP1Q15027 740 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 ZCWPW2Q504Y3 356 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 TTMPQ5BVD1 217 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 OLFML1Q6UWY5 402 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 SNX32Q86XE0 403 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 AENQ8WTP8 325 aaKnown RBP10.31□□□□□ -0.76
CHD3-201ENST00000330494 SYBUQ9NX95 663 aa10.31□□□□□ -0.76
CHD3-201ENST00000330494 C1orf232A0A0U1RR37 186 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 ATP4AP20648 1035 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 IL5RAQ01344 420 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 AMPD2Q01433 879 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 NEPROQ6NW34 567 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 UNC93AQ86WB7 457 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 ALLCQ8N6M5 410 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 MSRAQ9UJ68 235 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 NDUFAF1Q9Y375 327 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 KRT6AP02538 564 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 KRT6BP04259 564 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 KRT6CP48668 564 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 CLCNKBP51801 687 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 MAPK10P53779 464 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 FUT2Q10981 343 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 CES5AQ6NT32 575 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 SERPINA13PQ6UXR4 307 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 IRF2BP2Q7Z5L9 587 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 FAM228AQ86W67 206 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 OR56A4Q8NGH8 313 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 GLMNQ92990 594 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 OPTCQ9UBM4 332 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 DYRK3O43781 588 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 RAB14P61106 215 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 PRKAA1Q13131 559 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 IZUMO2Q6UXV1 221 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 PCDH20Q8N6Y1 951 aaKnown RBP10.3□□□□□ -0.76
CHD3-201ENST00000330494 KYQ8NBH2 561 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 UROC1Q96N76 676 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 MECRQ9BV79 373 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 POLG2Q9UHN1 485 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 PCDHGC5Q9Y5F6 944 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 TLR5O60602 858 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 RUNX1T1Q06455 604 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 CSTF3Q12996 717 aaKnown RBP10.3□□□□□ -0.76
CHD3-201ENST00000330494 OR52K2Q8NGK3 314 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 LPIN3Q9BQK8 851 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 TMEM79Q9BSE2 394 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 DPEP3Q9H4B8 488 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 WDR41Q9HAD4 459 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 ZFP14Q9HCL3 533 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 TMEM114B3SHH9 223 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 CABYRO75952 493 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 FLT3P36888 993 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 WASP42768 502 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 POLR2LP62875 67 aaKnown RBP10.3□□□□□ -0.76
CHD3-201ENST00000330494 TOMM20Q15388 145 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 PABPC1LQ4VXU2 614 aaKnown RBP10.3□□□□□ -0.76
CHD3-201ENST00000330494 FAM182AQ5T1J6 154 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 DCLRE1AQ6PJP8 1040 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 FAM151BQ6UXP7 276 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 GATAD2AQ86YP4 633 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 SYT17Q9BSW7 474 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 CAB39LQ9H9S4 337 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 CIDEBQ9UHD4 219 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 PARP4Q9UKK3 1724 aaKnown RBP10.3□□□□□ -0.76
CHD3-201ENST00000330494 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.3□□□□□ -0.76
CHD3-201ENST00000330494 ADAMTS3O15072 1205 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 ERCC2P18074 760 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 GPR1P46091 355 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 IL2P60568 153 aa10.3□□□□□ -0.76
CHD3-201ENST00000330494 SNRPD1P62314 119 aaKnown RBP10.3□□□□□ -0.76
CHD3-201ENST00000330494 SMAD3P84022 425 aaKnown RBP10.3□□□□□ -0.76
CHD3-201ENST00000330494 ZACNQ401N2 412 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms