RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 TMEM132BQ14DG7 1078 aa8.01□□□□□ -1.13
VMA21-201ENST00000330374 CCDC153Q494R4 210 aa8.01□□□□□ -1.13
VMA21-201ENST00000330374 ZBTB49Q6ZSB9 765 aa8.01□□□□□ -1.13
VMA21-201ENST00000330374 CHST15Q7LFX5 561 aaPredicted RBP8.01□□□□□ -1.13
VMA21-201ENST00000330374 KDELC2Q7Z4H8 507 aa8.01□□□□□ -1.13
VMA21-201ENST00000330374 HERC6Q8IVU3 1022 aa8.01□□□□□ -1.13
VMA21-201ENST00000330374 RP9Q8TA86 221 aaKnown RBP8.01□□□□□ -1.13
VMA21-201ENST00000330374 LPGAT1Q92604 370 aa8.01□□□□□ -1.13
VMA21-201ENST00000330374 SPATA13Q96N96 652 aa8.01□□□□□ -1.13
VMA21-201ENST00000330374 PCYT2Q99447 389 aa8.01□□□□□ -1.13
VMA21-201ENST00000330374 CDT1Q9H211 546 aa8.01□□□□□ -1.13
VMA21-201ENST00000330374 TMEM134Q9H6X4 195 aa8.01□□□□□ -1.13
VMA21-201ENST00000330374 COPG1Q9Y678 874 aaKnown RBP8.01□□□□□ -1.13
VMA21-201ENST00000330374 NEMP2A6NFY4 417 aa8.01□□□□□ -1.13
VMA21-201ENST00000330374 NRP1O14786 923 aa8.01□□□□□ -1.13
VMA21-201ENST00000330374 H6PDO95479 791 aa8.01□□□□□ -1.13
VMA21-201ENST00000330374 EGFRP00533 1210 aa8.01□□□□□ -1.13
VMA21-201ENST00000330374 STAG3L1P0CL83 205 aa8.01□□□□□ -1.13
VMA21-201ENST00000330374 TSPAN8P19075 237 aa8.01□□□□□ -1.13
VMA21-201ENST00000330374 ARL4AP40617 200 aa8.01□□□□□ -1.13
VMA21-201ENST00000330374 PLK1P53350 603 aa8.01□□□□□ -1.13
VMA21-201ENST00000330374 PRSS12P56730 875 aa8.01□□□□□ -1.13
VMA21-201ENST00000330374 PSME3P61289 254 aa8.01□□□□□ -1.13
VMA21-201ENST00000330374 FKBP1AP62942 108 aaKnown RBP8.01□□□□□ -1.13
VMA21-201ENST00000330374 USP10Q14694 798 aaKnown RBP8.01□□□□□ -1.13
VMA21-201ENST00000330374 STXBP2Q15833 593 aa8.01□□□□□ -1.13
VMA21-201ENST00000330374 TMEM102Q8N9M5 508 aaPredicted RBP8.01□□□□□ -1.13
VMA21-201ENST00000330374 CHRAC1Q9NRG0 131 aa8.01□□□□□ -1.13
VMA21-201ENST00000330374 ATP6AP2A0A1C7CYW4 349 aa8□□□□□ -1.13
VMA21-201ENST00000330374 MATN2O00339 956 aa8□□□□□ -1.13
VMA21-201ENST00000330374 ATP6AP2O75787 350 aa8□□□□□ -1.13
VMA21-201ENST00000330374 ZNF26P17031 533 aaPredicted RBP8□□□□□ -1.13
VMA21-201ENST00000330374 UBA1P22314 1058 aaKnown RBP8□□□□□ -1.13
VMA21-201ENST00000330374 EFNA5P52803 228 aa8□□□□□ -1.13
VMA21-201ENST00000330374 POU5F1BQ06416 359 aa8□□□□□ -1.13
VMA21-201ENST00000330374 NME3Q13232 169 aa8□□□□□ -1.13
VMA21-201ENST00000330374 IKBKEQ14164 716 aa8□□□□□ -1.13
VMA21-201ENST00000330374 AGKQ53H12 422 aa8□□□□□ -1.13
VMA21-201ENST00000330374 GPR107Q5VW38 600 aa8□□□□□ -1.13
VMA21-201ENST00000330374 NCBP2-AS2Q69YL0 99 aa8□□□□□ -1.13
VMA21-201ENST00000330374 OGFOD2Q6N063 350 aa8□□□□□ -1.13
VMA21-201ENST00000330374 ILDR2Q71H61 639 aa8□□□□□ -1.13
VMA21-201ENST00000330374 GPR141Q7Z602 305 aa8□□□□□ -1.13
VMA21-201ENST00000330374 TTC30AQ86WT1 665 aa8□□□□□ -1.13
VMA21-201ENST00000330374 PGAM4Q8N0Y7 254 aa8□□□□□ -1.13
VMA21-201ENST00000330374 PNPLA1Q8N8W4 532 aa8□□□□□ -1.13
VMA21-201ENST00000330374 CYGBQ8WWM9 190 aa8□□□□□ -1.13
VMA21-201ENST00000330374 ZNF670Q9BS34 389 aa8□□□□□ -1.13
VMA21-201ENST00000330374 SH3GLB1Q9Y371 365 aa8□□□□□ -1.13
VMA21-201ENST00000330374 WDR81Q562E7 1941 aa8□□□□□ -1.13
VMA21-201ENST00000330374 PRSS51A0A1B0GVH4 220 aa8□□□□□ -1.13
VMA21-201ENST00000330374 WNT10BO00744 389 aa8□□□□□ -1.13
VMA21-201ENST00000330374 BCAS2O75934 225 aaPredicted RBP8□□□□□ -1.13
VMA21-201ENST00000330374 FAM163BP0C2L3 166 aa8□□□□□ -1.13
VMA21-201ENST00000330374 ALOX15P16050 662 aaPredicted RBP8□□□□□ -1.13
VMA21-201ENST00000330374 SLC6A3Q01959 620 aa8□□□□□ -1.13
VMA21-201ENST00000330374 SURF1Q15526 300 aa8□□□□□ -1.13
VMA21-201ENST00000330374 TREML2Q5T2D2 321 aa8□□□□□ -1.13
VMA21-201ENST00000330374 ERI1Q8IV48 349 aaKnown RBP8□□□□□ -1.13
VMA21-201ENST00000330374 QKIQ96PU8 341 aaKnown RBP eCLIP8□□□□□ -1.13
VMA21-201ENST00000330374 RBBP8Q99708 897 aa8□□□□□ -1.13
VMA21-201ENST00000330374 NT5C1AQ9BXI3 368 aa8□□□□□ -1.13
VMA21-201ENST00000330374 TRIM8Q9BZR9 551 aa8□□□□□ -1.13
VMA21-201ENST00000330374 PRDM12Q9H4Q4 367 aa8□□□□□ -1.13
VMA21-201ENST00000330374 SELENONQ9NZV5 590 aa8□□□□□ -1.13
VMA21-201ENST00000330374 HESX1Q9UBX0 185 aa8□□□□□ -1.13
VMA21-201ENST00000330374 PFDN2Q9UHV9 154 aa8□□□□□ -1.13
VMA21-201ENST00000330374 PAIP2BQ9ULR5 123 aaKnown RBP8□□□□□ -1.13
VMA21-201ENST00000330374 TLL2Q9Y6L7 1015 aa8□□□□□ -1.13
VMA21-201ENST00000330374 V9GYQ6 96 aa8□□□□□ -1.13
VMA21-201ENST00000330374 J3QRK9 145 aa8□□□□□ -1.13
VMA21-201ENST00000330374 GRID2O43424 1007 aa8□□□□□ -1.13
VMA21-201ENST00000330374 PFKMP08237 780 aa8□□□□□ -1.13
VMA21-201ENST00000330374 ZNF23P17027 643 aa8□□□□□ -1.13
VMA21-201ENST00000330374 YAP1P46937 504 aaKnown RBP8□□□□□ -1.13
VMA21-201ENST00000330374 ESRRGP62508 458 aa8□□□□□ -1.13
VMA21-201ENST00000330374 PITX1P78337 314 aaPredicted RBP8□□□□□ -1.13
VMA21-201ENST00000330374 MPP3Q13368 585 aa8□□□□□ -1.13
VMA21-201ENST00000330374 PRPSAP1Q14558 356 aa8□□□□□ -1.13
VMA21-201ENST00000330374 GRM3Q14832 879 aa8□□□□□ -1.13
VMA21-201ENST00000330374 TTC33Q6PID6 262 aaPredicted RBP8□□□□□ -1.13
VMA21-201ENST00000330374 OLFML1Q6UWY5 402 aa8□□□□□ -1.13
VMA21-201ENST00000330374 OFCC1Q8IZS5 231 aa8□□□□□ -1.13
VMA21-201ENST00000330374 ZNF567Q8N184 647 aa8□□□□□ -1.13
VMA21-201ENST00000330374 SERBP1Q8NC51 408 aaKnown RBP eCLIP8□□□□□ -1.13
VMA21-201ENST00000330374 OR9I1Q8NGQ6 314 aa8□□□□□ -1.13
VMA21-201ENST00000330374 OR6B3Q8NGW1 331 aa8□□□□□ -1.13
VMA21-201ENST00000330374 FBXL8Q96CD0 374 aa8□□□□□ -1.13
VMA21-201ENST00000330374 RPL10LQ96L21 214 aaKnown RBP8□□□□□ -1.13
VMA21-201ENST00000330374 CPNE1Q99829 537 aa8□□□□□ -1.13
VMA21-201ENST00000330374 BCO2Q9BYV7 579 aa8□□□□□ -1.13
VMA21-201ENST00000330374 VPS33BQ9H267 617 aa8□□□□□ -1.13
VMA21-201ENST00000330374 GBA2Q9HCG7 927 aaPredicted RBP8□□□□□ -1.13
VMA21-201ENST00000330374 NUP205Q92621 2012 aa8□□□□□ -1.13
VMA21-201ENST00000330374 PTPRFP10586 1907 aa8□□□□□ -1.13
VMA21-201ENST00000330374 PSMD12O00232 456 aaPredicted RBP8□□□□□ -1.13
VMA21-201ENST00000330374 MCF2P10911 925 aa8□□□□□ -1.13
VMA21-201ENST00000330374 CPEP16870 476 aa8□□□□□ -1.13
VMA21-201ENST00000330374 VARSP26640 1264 aaKnown RBP8□□□□□ -1.13
VMA21-201ENST00000330374 PRDX6P30041 224 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms