RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 MXRA8Q9BRK3 442 aa6.42□□□□□ -1.38
SSH1-202ENST00000326495 COLEC11Q9BWP8 271 aa6.42□□□□□ -1.38
SSH1-202ENST00000326495 FAIM2Q9BWQ8 316 aa6.42□□□□□ -1.38
SSH1-202ENST00000326495 GALNT8Q9NY28 637 aa6.42□□□□□ -1.38
SSH1-202ENST00000326495 RAB26Q9ULW5 256 aa6.42□□□□□ -1.38
SSH1-202ENST00000326495 AGAP1Q9UPQ3 857 aa6.42□□□□□ -1.38
SSH1-202ENST00000326495 PCDHGB1Q9Y5G3 927 aa6.42□□□□□ -1.38
SSH1-202ENST00000326495 PCDHA3Q9Y5H8 950 aa6.42□□□□□ -1.38
SSH1-202ENST00000326495 AKAP8O43823 692 aaKnown RBP6.41□□□□□ -1.38
SSH1-202ENST00000326495 ATF4P18848 351 aaPredicted RBP6.41□□□□□ -1.38
SSH1-202ENST00000326495 BGNP21810 368 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 GPR15P49685 360 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 CDC42P60953 191 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 SLC15A2Q16348 729 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 PKN1Q16512 942 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 DDI2Q5TDH0 399 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 IL31Q6EBC2 164 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 KATNAL2Q8IYT4 538 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 TIFAQ96CG3 184 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 CLK4Q9HAZ1 481 aaKnown RBP6.41□□□□□ -1.38
SSH1-202ENST00000326495 PIN4Q9Y237 131 aaKnown RBP6.41□□□□□ -1.38
SSH1-202ENST00000326495 R3HDM2Q9Y2K5 976 aaKnown RBP6.41□□□□□ -1.38
SSH1-202ENST00000326495 APOC4-APOC2K7ER74 178 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 KCNH1O95259 989 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 APOC2P02655 101 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 CHRM3P20309 590 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 ITGAXP20702 1163 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 CD151P48509 253 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 MEA1Q16626 185 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 DPY19L1Q2PZI1 675 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 RASSF6Q6ZTQ3 369 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 DHDDSQ86SQ9 333 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 CLVS1Q8IUQ0 354 aaPredicted RBP6.41□□□□□ -1.38
SSH1-202ENST00000326495 PCSK9Q8NBP7 692 aaKnown RBP6.41□□□□□ -1.38
SSH1-202ENST00000326495 TRPV1Q8NER1 839 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 ITFG1Q8TB96 612 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 WRNIP1Q96S55 665 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 ZNF607Q96SK3 696 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 LRMDAQ9H2I8 198 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 IL1RAPQ9NPH3 570 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 MORF4L1Q9UBU8 362 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 ROBO3Q96MS0 1386 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.41□□□□□ -1.38
SSH1-202ENST00000326495 CTDNEP1O95476 244 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 S100A6P06703 90 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 CYP2A6P11509 494 aaPredicted RBP6.41□□□□□ -1.38
SSH1-202ENST00000326495 ERFP50548 548 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 KLHL26Q53HC5 615 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 ZNF605Q86T29 641 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 CREG2Q8IUH2 290 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 UBASH3BQ8TF42 649 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 MRPL57Q9BQC6 102 aaKnown RBP6.41□□□□□ -1.38
SSH1-202ENST00000326495 GRIP2Q9C0E4 1043 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 ZDHHC4Q9NPG8 344 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 DUSP12Q9UNI6 340 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 ATRNO75882 1429 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 FUT11Q495W5 492 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 SYCE2Q6PIF2 218 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 CLN6Q9NWW5 311 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 PCDHGA3Q9Y5H0 932 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 PRAMEF22A3QJZ6 481 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 F5H5T6 163 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 ALOX12P18054 663 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 SREBF1P36956 1147 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 KLHL35Q6PF15 583 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 TATDN2Q93075 761 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 PPP1R16AQ96I34 528 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 SSU72Q9NP77 194 aaKnown RBP6.41□□□□□ -1.38
SSH1-202ENST00000326495 PIM2Q9P1W9 311 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 ZNF510Q9Y2H8 683 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 NACAE9PAV3 2078 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 RGSL1A5PLK6 1076 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 SYNDIG1LA6NDD5 238 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 SNAP23O00161 211 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 AP3D1O14617 1153 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 TMCC2O75069 709 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 APOC1P02654 83 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 NUDT17P0C025 328 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 CYP19A1P11511 503 aaPredicted RBP6.41□□□□□ -1.38
SSH1-202ENST00000326495 CPB1P15086 417 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 CASP4P49662 377 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 NR6A1Q15406 480 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 CRY1Q16526 586 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 LAYNQ6UX15 382 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 PAMR1Q6UXH9 720 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 CPNE9Q8IYJ1 553 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 MAN1C1Q9NR34 630 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 GPRC5DQ9NZD1 345 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.41□□□□□ -1.38
SSH1-202ENST00000326495 MSCO60682 206 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 FARP2O94887 1054 aaPredicted RBP6.41□□□□□ -1.38
SSH1-202ENST00000326495 PROSCO94903 275 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 STOMP27105 288 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 PRKG2Q13237 762 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 ZNF177Q13360 481 aaPredicted RBP6.41□□□□□ -1.38
SSH1-202ENST00000326495 TOMM20Q15388 145 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 FAM83AQ86UY5 434 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 KCNMB4Q86W47 210 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 ELOVL4Q9GZR5 314 aa6.41□□□□□ -1.38
SSH1-202ENST00000326495 RAVER2Q9HCJ3 691 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms