RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 ZNF568Q3ZCX4 644 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 EFHC2Q5JST6 749 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 CRTC1Q6UUV9 634 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 VSTM1Q6UX27 236 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 ZNF720Q7Z2F6 126 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 TRIM59Q8IWR1 403 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 CSGALNACT2Q8N6G5 542 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 TC2NQ8N9U0 490 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 DEPTORQ8TB45 409 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 KIFAP3Q92845 792 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 SNRNP40Q96DI7 357 aaKnown RBP6.86□□□□□ -1.31
CSTF3-201ENST00000323959 PIWIL1Q96J94 861 aaKnown RBP6.86□□□□□ -1.31
CSTF3-201ENST00000323959 SLC25A23Q9BV35 468 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 ASPSCR1Q9BZE9 553 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 PLCB1Q9NQ66 1216 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 LSM7Q9UK45 103 aaKnown RBP6.86□□□□□ -1.31
CSTF3-201ENST00000323959 PCDHB13Q9Y5F0 798 aa6.86□□□□□ -1.31
CSTF3-201ENST00000323959 MUSKO15146 869 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 MFAP3LO75121 409 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 MAP3K6O95382 1288 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 LCA5LO95447 670 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 PTMAP06454 111 aaKnown RBP6.85□□□□□ -1.31
CSTF3-201ENST00000323959 PLS3P13797 630 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 NME1P15531 152 aaKnown RBP6.85□□□□□ -1.31
CSTF3-201ENST00000323959 NFKBIAP25963 317 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 RPL13P26373 211 aaKnown RBP6.85□□□□□ -1.31
CSTF3-201ENST00000323959 HOXD13P35453 343 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 NOP14P78316 857 aaKnown RBP6.85□□□□□ -1.31
CSTF3-201ENST00000323959 SEMA5AQ13591 1074 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 ZNF235Q14590 738 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 LONRF1Q17RB8 773 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 BHLHB9Q6PI77 547 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 NYAP1Q6ZVC0 841 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 RHOT1Q8IXI2 618 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 ALPK1Q96QP1 1244 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 RUSC1Q9BVN2 902 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 ASF1BQ9NVP2 202 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 WRAP73Q9P2S5 460 aaPredicted RBP6.85□□□□□ -1.31
CSTF3-201ENST00000323959 MAGEC2Q9UBF1 373 aaPredicted RBP6.85□□□□□ -1.31
CSTF3-201ENST00000323959 SIK3Q9Y2K2 1263 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 PRRC2AP48634 2157 aaKnown RBP6.85□□□□□ -1.31
CSTF3-201ENST00000323959 DOCK9Q9BZ29 2069 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 A0A087WWV3 80 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 FAM47DPA6NHR8 397 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 F9P00740 461 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 RPLP0P05388 317 aaKnown RBP6.85□□□□□ -1.31
CSTF3-201ENST00000323959 CDK11BP21127 795 aaKnown RBP6.85□□□□□ -1.31
CSTF3-201ENST00000323959 MAN1A1P33908 653 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 ABL2P42684 1182 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 ADPRHP54922 357 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 RAB15P59190 212 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 CCL7P80098 99 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 DMTNQ08495 405 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 GEN1Q17RS7 908 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 VWA3BQ502W6 1294 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 FNDC3BQ53EP0 1204 aaKnown RBP6.85□□□□□ -1.31
CSTF3-201ENST00000323959 C16orf46Q6P387 395 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 BTN2A2Q8WVV5 523 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 FAM131CQ96AQ9 280 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 AGAP3Q96P47 875 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 DCLK3Q9C098 648 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 BHMT2Q9H2M3 363 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 AGPAT4Q9NRZ5 378 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 G3BP2Q9UN86 482 aaKnown RBP6.85□□□□□ -1.31
CSTF3-201ENST00000323959 OSGIN2Q9Y236 505 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 STYXL1Q9Y6J8 313 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 ANK2Q01484 3957 aa6.85□□□□□ -1.31
CSTF3-201ENST00000323959 TARSL2A2RTX5 802 aaKnown RBP6.84□□□□□ -1.31
CSTF3-201ENST00000323959 B4E171 279 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 AKR1B15C9JRZ8 316 aaPredicted RBP6.84□□□□□ -1.31
CSTF3-201ENST00000323959 SCAMP3O14828 347 aaKnown RBP6.84□□□□□ -1.31
CSTF3-201ENST00000323959 AQP9O43315 295 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 TBCAO75347 108 aaKnown RBP6.84□□□□□ -1.31
CSTF3-201ENST00000323959 EDN1P05305 212 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 TSPAN7P41732 249 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 GOLGA8FQ08AF8 430 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 GOLGA8DPQ0D2H9 430 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 CHRNA6Q15825 494 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 KYAT1Q16773 422 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 CRB2Q5IJ48 1285 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 SNX30Q5VWJ9 437 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 DPY19L2P1Q6NXN4 242 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 PODNL1Q6PEZ8 512 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 XKRXQ6PP77 449 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 Q71RC1 249 aaPredicted RBP6.84□□□□□ -1.31
CSTF3-201ENST00000323959 TMTC1Q8IUR5 882 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 SLITRK4Q8IW52 837 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 SLC35F3Q8IY50 421 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 DAW1Q8N136 415 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 TMEM145Q8NBT3 493 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 OR6B3Q8NGW1 331 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 JPH3Q8WXH2 748 aaPredicted RBP6.84□□□□□ -1.31
CSTF3-201ENST00000323959 CCDC43Q96MW1 224 aaKnown RBP6.84□□□□□ -1.31
CSTF3-201ENST00000323959 PKMYT1Q99640 499 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 IL12RB2Q99665 862 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 ACBD6Q9BR61 282 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 TUBGCP2Q9BSJ2 902 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 GPR27Q9NS67 375 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 TNFRSF10DQ9UBN6 386 aa6.84□□□□□ -1.31
CSTF3-201ENST00000323959 ADAM21Q9UKJ8 722 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms