RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 SPATA6LQ8N4H0 392 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 DHRSXQ8N5I4 330 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 TERB1Q8NA31 727 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 C18orf25Q96B23 403 aaPredicted RBP14.94□□□□□ -0.02
TCOF1-201ENST00000323668 ASB2Q96Q27 587 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 DSEQ9UL01 958 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 RAD54BQ9Y620 910 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 MGAT5BQ3V5L5 792 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 ATP6AP1LQ52LC2 224 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 TEX44Q53QW1 395 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 SGO1Q5FBB7 561 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 OTUD3Q5T2D3 398 aaPredicted RBP14.94□□□□□ -0.02
TCOF1-201ENST00000323668 FSTL4Q6MZW2 842 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 IGDCC3Q8IVU1 814 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 PYROXD2Q8N2H3 581 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 TMEM86AQ8N2M4 240 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 ZNF781Q8N8C0 355 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 MFSD3Q96ES6 412 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 BDH2Q9BUT1 245 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 EBF3Q9H4W6 596 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 PRDX6P30041 224 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 C9orf57Q5W0N0 161 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 ADCK1Q86TW2 530 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 FBXO39Q8N4B4 442 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 CCDC185Q8N715 623 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 HASPINQ8TF76 798 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 NSMCE2Q96MF7 247 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 GBA2Q9HCG7 927 aaPredicted RBP14.94□□□□□ -0.02
TCOF1-201ENST00000323668 CHRAC1Q9NRG0 131 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 ADAMTS7Q9UKP4 1686 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 ZNF839A8K0R7 811 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 CDH5P33151 784 aaPredicted RBP14.93□□□□□ -0.02
TCOF1-201ENST00000323668 GRIA1P42261 906 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 OR1G1P47890 313 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 SERPINH1P50454 418 aaKnown RBP14.93□□□□□ -0.02
TCOF1-201ENST00000323668 TAF2Q6P1X5 1199 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 TMEM192Q8IY95 271 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 ZNF567Q8N184 647 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 MPP5Q8N3R9 675 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 PIF1Q9H611 641 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 ALG9Q9H6U8 611 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 PNPLA8Q9NP80 782 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 TUBGCP4Q9UGJ1 667 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 PRG3Q9Y2Y8 225 aaPredicted RBP14.93□□□□□ -0.02
TCOF1-201ENST00000323668 MRPL42Q9Y6G3 142 aaKnown RBP14.93□□□□□ -0.02
TCOF1-201ENST00000323668 MYO5AQ9Y4I1 1855 aaKnown RBP14.93□□□□□ -0.02
TCOF1-201ENST00000323668 E7ESA3 106 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 GPR182O15218 404 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 PEX10O60683 326 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 AP2A1O95782 977 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 BDNFP23560 247 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 PPM1FP49593 454 aaPredicted RBP14.93□□□□□ -0.02
TCOF1-201ENST00000323668 EFEMP1Q12805 493 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 PEX6Q13608 980 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 DPYSL2Q16555 572 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 OVOS1Q6IE37 1185 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 DPY19L2P1Q6NXN4 242 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 AMIGO2Q86SJ2 522 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 OSCP1Q8WVF1 389 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 SEPT5Q99719 369 aaPredicted RBP14.93□□□□□ -0.02
TCOF1-201ENST00000323668 CINPQ9BW66 212 aaPredicted RBP14.93□□□□□ -0.02
TCOF1-201ENST00000323668 GPR63Q9BZJ6 419 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 PAIP1Q9H074 479 aaKnown RBP14.93□□□□□ -0.02
TCOF1-201ENST00000323668 STK39Q9UEW8 545 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 CRYL1Q9Y2S2 319 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 AK5Q9Y6K8 562 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 COL18A1P39060 1754 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 FAM159BA6NKW6 160 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 CRTAMO95727 393 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 HOXB8P17481 243 aaPredicted RBP14.93□□□□□ -0.02
TCOF1-201ENST00000323668 MFSD14CQ5VZR4 134 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 POTEHQ6S545 545 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 SKA1Q96BD8 255 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 ZNF512Q96ME7 567 aaPredicted RBP14.93□□□□□ -0.02
TCOF1-201ENST00000323668 NPAS2Q99743 824 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 ZNF229Q9UJW7 825 aa14.93□□□□□ -0.02
TCOF1-201ENST00000323668 SOWAHBA6NEL2 793 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 KDM1AO60341 852 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 PRKCHP24723 683 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 PCYT1AP49585 367 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 NUMBP49757 651 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 ILF2Q12905 390 aaKnown RBP14.92□□□□□ -0.02
TCOF1-201ENST00000323668 C12orf42Q96LP6 360 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 OSBPL11Q9BXB4 747 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 CNGB3Q9NQW8 809 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 KAT6AQ92794 2004 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 ZBTB24O43167 697 aaPredicted RBP14.92□□□□□ -0.02
TCOF1-201ENST00000323668 L1CAMP32004 1257 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 CLCN5P51795 746 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 AIF1P55008 147 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 UGT3A1Q6NUS8 523 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 GAD1Q99259 594 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 CASS4Q9NQ75 786 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 SCN3BQ9NY72 215 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 UTP6Q9NYH9 597 aaKnown RBP14.92□□□□□ -0.02
TCOF1-201ENST00000323668 ATP6AP2A0A1C7CYW4 349 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 MYO1GB0I1T2 1018 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 ATP6AP2O75787 350 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 SERPINF2P08697 491 aa14.92□□□□□ -0.02
TCOF1-201ENST00000323668 HIST1H2AGP0C0S8 130 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms