RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 AGAP3Q96P47 875 aa19.74■□□□□ 0.75
ZNF554-201ENST00000317243 FRMD8Q9BZ67 464 aaPredicted RBP19.74■□□□□ 0.75
ZNF554-201ENST00000317243 GDAP2Q9NXN4 497 aa19.74■□□□□ 0.75
ZNF554-201ENST00000317243 RAB26Q9ULW5 256 aa19.74■□□□□ 0.75
ZNF554-201ENST00000317243 PSAT1Q9Y617 370 aa19.74■□□□□ 0.75
ZNF554-201ENST00000317243 E9PBE3 544 aa19.74■□□□□ 0.75
ZNF554-201ENST00000317243 ARRB2P32121 409 aa19.74■□□□□ 0.75
ZNF554-201ENST00000317243 BBS5Q8N3I7 341 aa19.74■□□□□ 0.75
ZNF554-201ENST00000317243 SLC35B4Q969S0 331 aa19.74■□□□□ 0.75
ZNF554-201ENST00000317243 ULBP1Q9BZM6 244 aa19.74■□□□□ 0.75
ZNF554-201ENST00000317243 COPS7BQ9H9Q2 264 aaPredicted RBP19.74■□□□□ 0.75
ZNF554-201ENST00000317243 ZNF358Q9NW07 568 aa19.74■□□□□ 0.75
ZNF554-201ENST00000317243 HAS3O00219 553 aa19.73■□□□□ 0.75
ZNF554-201ENST00000317243 FBXO21O94952 628 aa19.73■□□□□ 0.75
ZNF554-201ENST00000317243 ATP5BP06576 529 aaKnown RBP19.73■□□□□ 0.75
ZNF554-201ENST00000317243 USP17L7P0C7H9 530 aa19.73■□□□□ 0.75
ZNF554-201ENST00000317243 PSMB4P28070 264 aa19.73■□□□□ 0.75
ZNF554-201ENST00000317243 ABCG1P45844 678 aa19.73■□□□□ 0.75
ZNF554-201ENST00000317243 CCR3P51677 355 aa19.73■□□□□ 0.75
ZNF554-201ENST00000317243 TKTL1P51854 596 aa19.73■□□□□ 0.75
ZNF554-201ENST00000317243 ATXN3P54252 364 aaPredicted RBP19.73■□□□□ 0.75
ZNF554-201ENST00000317243 MTTPP55157 894 aa19.73■□□□□ 0.75
ZNF554-201ENST00000317243 SLC7A14Q8TBB6 771 aa19.73■□□□□ 0.75
ZNF554-201ENST00000317243 HTR3CQ8WXA8 447 aa19.73■□□□□ 0.75
ZNF554-201ENST00000317243 P2RY11Q96G91 374 aa19.73■□□□□ 0.75
ZNF554-201ENST00000317243 ATXN7L3BQ96GX2 97 aa19.73■□□□□ 0.75
ZNF554-201ENST00000317243 QKIQ96PU8 341 aaKnown RBP eCLIP19.73■□□□□ 0.75
ZNF554-201ENST00000317243 DUSP16Q9BY84 665 aa19.73■□□□□ 0.75
ZNF554-201ENST00000317243 C6orf203Q9P0P8 240 aaPredicted RBP19.73■□□□□ 0.75
ZNF554-201ENST00000317243 PCDHA11Q9Y5I1 949 aa19.73■□□□□ 0.75
ZNF554-201ENST00000317243 C17orf102A2RUQ5 167 aa19.73■□□□□ 0.75
ZNF554-201ENST00000317243 KLHL41O60662 606 aa19.73■□□□□ 0.75
ZNF554-201ENST00000317243 CD4P01730 458 aa19.73■□□□□ 0.75
ZNF554-201ENST00000317243 KCNE1P15382 129 aa19.73■□□□□ 0.75
ZNF554-201ENST00000317243 CD1EP15812 388 aa19.73■□□□□ 0.75
ZNF554-201ENST00000317243 SERPINB9P50453 376 aa19.73■□□□□ 0.75
ZNF554-201ENST00000317243 HUNKP57058 714 aa19.73■□□□□ 0.75
ZNF554-201ENST00000317243 RARS2Q5T160 578 aaKnown RBP19.73■□□□□ 0.75
ZNF554-201ENST00000317243 C2orf69Q8N8R5 385 aa19.73■□□□□ 0.75
ZNF554-201ENST00000317243 COLGALT1Q8NBJ5 622 aa19.73■□□□□ 0.75
ZNF554-201ENST00000317243 DDI1Q8WTU0 396 aa19.73■□□□□ 0.75
ZNF554-201ENST00000317243 RNF139Q8WU17 664 aa19.73■□□□□ 0.75
ZNF554-201ENST00000317243 CMTM5Q96DZ9 223 aa19.73■□□□□ 0.75
ZNF554-201ENST00000317243 PPP1R36Q96LQ0 422 aa19.73■□□□□ 0.75
ZNF554-201ENST00000317243 PRDM12Q9H4Q4 367 aa19.73■□□□□ 0.75
ZNF554-201ENST00000317243 RSL24D1Q9UHA3 163 aaKnown RBP19.73■□□□□ 0.75
ZNF554-201ENST00000317243 RNF103O00237 685 aa19.72■□□□□ 0.75
ZNF554-201ENST00000317243 TFPTP0C1Z6 253 aa19.72■□□□□ 0.75
ZNF554-201ENST00000317243 NPR3P17342 541 aa19.72■□□□□ 0.75
ZNF554-201ENST00000317243 NELFEP18615 380 aaKnown RBP19.72■□□□□ 0.75
ZNF554-201ENST00000317243 MGAT1P26572 445 aa19.72■□□□□ 0.75
ZNF554-201ENST00000317243 ENTPD1P49961 510 aa19.72■□□□□ 0.75
ZNF554-201ENST00000317243 PGGT1BP53609 377 aa19.72■□□□□ 0.75
ZNF554-201ENST00000317243 NAA20P61599 178 aa19.72■□□□□ 0.75
ZNF554-201ENST00000317243 C16orf72Q14CZ0 275 aa19.72■□□□□ 0.75
ZNF554-201ENST00000317243 PCLAFQ15004 111 aa19.72■□□□□ 0.75
ZNF554-201ENST00000317243 TAF1CQ15572 869 aaPredicted RBP19.72■□□□□ 0.75
ZNF554-201ENST00000317243 SLC25A52Q3SY17 297 aa19.72■□□□□ 0.75
ZNF554-201ENST00000317243 CDKL3Q8IVW4 592 aaPredicted RBP19.72■□□□□ 0.75
ZNF554-201ENST00000317243 SPNS2Q8IVW8 549 aa19.72■□□□□ 0.75
ZNF554-201ENST00000317243 TRPV1Q8NER1 839 aa19.72■□□□□ 0.75
ZNF554-201ENST00000317243 ZNF560Q96MR9 790 aa19.72■□□□□ 0.75
ZNF554-201ENST00000317243 OXCT2Q9BYC2 517 aaPredicted RBP19.72■□□□□ 0.75
ZNF554-201ENST00000317243 CCDC78A2IDD5 438 aa19.72■□□□□ 0.75
ZNF554-201ENST00000317243 XPO1O14980 1071 aaKnown RBP19.72■□□□□ 0.75
ZNF554-201ENST00000317243 PLIN3O60664 434 aa19.72■□□□□ 0.75
ZNF554-201ENST00000317243 THRAP10827 490 aa19.72■□□□□ 0.75
ZNF554-201ENST00000317243 FSCN1Q16658 493 aaKnown RBP19.72■□□□□ 0.75
ZNF554-201ENST00000317243 PATL1Q86TB9 770 aaKnown RBP19.72■□□□□ 0.75
ZNF554-201ENST00000317243 ZMIZ2Q8NF64 920 aa19.72■□□□□ 0.75
ZNF554-201ENST00000317243 APBB2Q92870 758 aa19.72■□□□□ 0.75
ZNF554-201ENST00000317243 ATP2A3Q93084 1043 aa19.72■□□□□ 0.75
ZNF554-201ENST00000317243 LRRC39Q96DD0 335 aa19.72■□□□□ 0.75
ZNF554-201ENST00000317243 SENP8Q96LD8 212 aa19.72■□□□□ 0.75
ZNF554-201ENST00000317243 SMOQ99835 787 aa19.72■□□□□ 0.75
ZNF554-201ENST00000317243 CDY2AQ9Y6F7 541 aa19.72■□□□□ 0.75
ZNF554-201ENST00000317243 GCATO75600 419 aa19.71■□□□□ 0.75
ZNF554-201ENST00000317243 DGKIO75912 1065 aa19.71■□□□□ 0.75
ZNF554-201ENST00000317243 MAGEA3P43357 314 aa19.71■□□□□ 0.75
ZNF554-201ENST00000317243 SCNN1GP51170 649 aa19.71■□□□□ 0.75
ZNF554-201ENST00000317243 PURAQ00577 322 aaKnown RBP19.71■□□□□ 0.75
ZNF554-201ENST00000317243 SV2CQ496J9 727 aa19.71■□□□□ 0.75
ZNF554-201ENST00000317243 XKR4Q5GH76 650 aa19.71■□□□□ 0.75
ZNF554-201ENST00000317243 BORAQ6PGQ7 559 aa19.71■□□□□ 0.75
ZNF554-201ENST00000317243 ALDH16A1Q8IZ83 802 aa19.71■□□□□ 0.75
ZNF554-201ENST00000317243 TNS4Q8IZW8 715 aa19.71■□□□□ 0.75
ZNF554-201ENST00000317243 GRIN3AQ8TCU5 1115 aa19.71■□□□□ 0.75
ZNF554-201ENST00000317243 PCED1BQ96HM7 432 aa19.71■□□□□ 0.75
ZNF554-201ENST00000317243 ZNF512Q96ME7 567 aaPredicted RBP19.71■□□□□ 0.75
ZNF554-201ENST00000317243 PPP1R10Q96QC0 940 aaKnown RBP19.71■□□□□ 0.75
ZNF554-201ENST00000317243 SORT1Q99523 831 aa19.71■□□□□ 0.75
ZNF554-201ENST00000317243 LRRC4Q9HBW1 653 aa19.71■□□□□ 0.75
ZNF554-201ENST00000317243 XPNPEP3Q9NQH7 507 aa19.71■□□□□ 0.75
ZNF554-201ENST00000317243 THEGQ9P2T0 379 aa19.71■□□□□ 0.75
ZNF554-201ENST00000317243 ST3GAL5Q9UNP4 418 aa19.71■□□□□ 0.75
ZNF554-201ENST00000317243 SCN4AP35499 1836 aa19.71■□□□□ 0.75
ZNF554-201ENST00000317243 ARL4AP40617 200 aa19.71■□□□□ 0.75
ZNF554-201ENST00000317243 RPL34P49207 117 aaKnown RBP19.71■□□□□ 0.75
ZNF554-201ENST00000317243 POTEHQ6S545 545 aa19.71■□□□□ 0.75
ZNF554-201ENST00000317243 Q6ZNX1 250 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms