RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 CDH17Q12864 832 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 HNRNPDQ14103 355 aaKnown RBP4.57□□□□□ -1.68
CNOT1-201ENST00000317147 GNA13Q14344 377 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 ERICH5Q6P6B1 374 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 LRRC47Q8N1G4 583 aaKnown RBP4.57□□□□□ -1.68
CNOT1-201ENST00000317147 BHLHE22Q8NFJ8 381 aaPredicted RBP4.57□□□□□ -1.68
CNOT1-201ENST00000317147 C7orf43Q8WVR3 580 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 PRCCQ92733 491 aaPredicted RBP4.57□□□□□ -1.68
CNOT1-201ENST00000317147 NSMCE3Q96MG7 304 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 ZNF570Q96NI8 536 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 ERMAPQ96PL5 475 aaPredicted RBP4.57□□□□□ -1.68
CNOT1-201ENST00000317147 ZNF670Q9BS34 389 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 CCDC32Q9BV29 185 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 CINPQ9BW66 212 aaPredicted RBP4.57□□□□□ -1.68
CNOT1-201ENST00000317147 C6orf62Q9GZU0 229 aaPredicted RBP4.57□□□□□ -1.68
CNOT1-201ENST00000317147 SLA2Q9H6Q3 261 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 VTA1Q9NP79 307 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 FAM217BQ9NTX9 383 aaPredicted RBP4.57□□□□□ -1.68
CNOT1-201ENST00000317147 PCDHB8Q9UN66 801 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 HTTP42858 3142 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 UBE2QL1A1L167 161 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 RNASEH1O60930 286 aaKnown RBP4.57□□□□□ -1.68
CNOT1-201ENST00000317147 M6PRP20645 277 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 IMPDH1P20839 514 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 ADRA1DP25100 572 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 FAUP35544 74 aaKnown RBP4.57□□□□□ -1.68
CNOT1-201ENST00000317147 CUL2Q13617 745 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 IMPG1Q17R60 797 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 HSD17B12Q53GQ0 312 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 C16orf86Q6ZW13 317 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 FLAD1Q8NFF5 587 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 SLC44A1Q8WWI5 657 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 LPAR1Q92633 364 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 PRDM5Q9NQX1 630 aaPredicted RBP4.57□□□□□ -1.68
CNOT1-201ENST00000317147 SNX7Q9UNH6 387 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 MGAQ8IWI9 3026 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 MLYCDO95822 493 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 PRLP01236 227 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 SNRPB2P08579 225 aaKnown RBP4.57□□□□□ -1.68
CNOT1-201ENST00000317147 ADRA2BP18089 450 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 BST2Q10589 180 aaKnown RBP4.57□□□□□ -1.68
CNOT1-201ENST00000317147 DLGAP5Q15398 846 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 LZTR1Q8N653 840 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 MCFD2Q8NI22 146 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 C10orf82Q8WW14 230 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 BSNDQ8WZ55 320 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 SNX27Q96L92 541 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 POLR1BQ9H9Y6 1135 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 BTAF1O14981 1849 aa4.57□□□□□ -1.68
CNOT1-201ENST00000317147 TANC1Q9C0D5 1861 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 LOC100653049A0A140TA62 436 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 ZSCAN9O15535 394 aaPredicted RBP4.56□□□□□ -1.68
CNOT1-201ENST00000317147 CABYRO75952 493 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 ZBTB11O95625 1053 aaPredicted RBP4.56□□□□□ -1.68
CNOT1-201ENST00000317147 ITGA4P13612 1032 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 CCT3P49368 545 aaKnown RBP4.56□□□□□ -1.68
CNOT1-201ENST00000317147 CDC42P60953 191 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 TKFCQ3LXA3 575 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 HGSNATQ68CP4 663 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 LMBRD2Q68DH5 695 aaPredicted RBP4.56□□□□□ -1.68
CNOT1-201ENST00000317147 SCYL2Q6P3W7 929 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 P2RY8Q86VZ1 359 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 KIAA0895Q8NCT3 520 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 CAPSLQ8WWF8 208 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 ULK4Q96C45 1275 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 DDX50Q9BQ39 737 aaKnown RBP4.56□□□□□ -1.68
CNOT1-201ENST00000317147 MND1Q9BWT6 205 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 RETREG1Q9H6L5 497 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 RBAKQ9NYW8 714 aaPredicted RBP4.56□□□□□ -1.68
CNOT1-201ENST00000317147 NUP50Q9UKX7 468 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 RAB23Q9ULC3 237 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 SAMD4AQ9UPU9 718 aaKnown RBP4.56□□□□□ -1.68
CNOT1-201ENST00000317147 CHKBQ9Y259 395 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 DNAJC16Q9Y2G8 782 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 ZNF487B1APH4 448 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 M0QZ92 97 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 ZNF197O14709 1029 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 LGR5O75473 907 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 ITGB3P05106 788 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 FGRP09769 529 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 MYL12AP19105 171 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 FGFR3P22607 806 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 PTGER2P43116 358 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 CDK8P49336 464 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 DYNLT1P63172 113 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 FASTKQ14296 549 aaKnown RBP4.56□□□□□ -1.68
CNOT1-201ENST00000317147 FAM187BQ17R55 369 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 ATP6AP1LQ52LC2 224 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 FAM102AQ5T9C2 384 aaPredicted RBP4.56□□□□□ -1.68
CNOT1-201ENST00000317147 IYDQ6PHW0 289 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 RNF135Q8IUD6 432 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 DDIASQ8IXT1 998 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 MCOLN2Q8IZK6 566 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 ABRAQ8N0Z2 381 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 ELMOD1Q8N336 334 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 ASCC1Q8N9N2 400 aaKnown RBP4.56□□□□□ -1.68
CNOT1-201ENST00000317147 THRSPQ92748 146 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 ADI1Q9BV57 179 aa4.56□□□□□ -1.68
CNOT1-201ENST00000317147 TDRD1Q9BXT4 1180 aaKnown RBP4.56□□□□□ -1.68
CNOT1-201ENST00000317147 SLC22A4Q9H015 551 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms