RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 SLC25A3Q00325 362 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 SEMA3BQ13214 749 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 PPM1JQ5JR12 505 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 OR52E8Q6IFG1 317 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 RIPOR1Q6ZS17 1223 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 RAPH1Q70E73 1250 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 RELL1Q8IUW5 271 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 DCP1BQ8IZD4 617 aaKnown RBP7.75□□□□□ -1.17
TRIM55-202ENST00000315962 TEX9Q8N6V9 391 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 ENDOVQ8N8Q3 282 aaKnown RBP7.75□□□□□ -1.17
TRIM55-202ENST00000315962 BANPQ8N9N5 519 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 FBXO22Q8NEZ5 403 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 IGSF8Q969P0 613 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 FAM136AQ96C01 138 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 OXNAD1Q96HP4 312 aaPredicted RBP7.75□□□□□ -1.17
TRIM55-202ENST00000315962 UROC1Q96N76 676 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 FCRL3Q96P31 734 aaPredicted RBP7.75□□□□□ -1.17
TRIM55-202ENST00000315962 TTPALQ9BTX7 342 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 VN1R3Q9BXE9 311 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 FTHL17Q9BXU8 183 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 IQCGQ9H095 443 aaKnown RBP7.75□□□□□ -1.17
TRIM55-202ENST00000315962 PAK6Q9NQU5 681 aaPredicted RBP7.75□□□□□ -1.17
TRIM55-202ENST00000315962 CPSF2Q9P2I0 782 aaKnown RBP7.75□□□□□ -1.17
TRIM55-202ENST00000315962 SCOCQ9UIL1 159 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 ACTL7BQ9Y614 415 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 AK5Q9Y6K8 562 aa7.75□□□□□ -1.17
TRIM55-202ENST00000315962 ZNF638Q14966 1978 aaKnown RBP7.74□□□□□ -1.17
TRIM55-202ENST00000315962 SF3B1O75533 1304 aaKnown RBP eCLIP7.74□□□□□ -1.17
TRIM55-202ENST00000315962 MYOCOSA0A1B0GUC4 107 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 GOLGA8CPA6NN73 597 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 PRR5-ARHGAP8B1AHC4 643 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 E7ESA3 106 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 DNAJC6O75061 913 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 GJB5O95377 273 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 F9P00740 461 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 CD1EP15812 388 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 ACADSP16219 412 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 MSX2P35548 267 aaPredicted RBP7.74□□□□□ -1.17
TRIM55-202ENST00000315962 SCNN1AP37088 669 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 CCNG1P51959 295 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 AQP5P55064 265 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 ARHGAP8P85298 464 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 CDK16Q00536 496 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 SLC34A1Q06495 639 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 BST1Q10588 318 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 PRKD1Q15139 912 aaPredicted RBP7.74□□□□□ -1.17
TRIM55-202ENST00000315962 CHI3L2Q15782 390 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 HSF5Q4G112 596 aaPredicted RBP7.74□□□□□ -1.17
TRIM55-202ENST00000315962 WASHC2DQ5SRD0 308 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 C1orf146Q5VVC0 180 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 ZNF280DQ6N043 979 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 SPATA6LQ8N4H0 392 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 RPRD1AQ96P16 312 aaPredicted RBP7.74□□□□□ -1.17
TRIM55-202ENST00000315962 EBNA1BP2Q99848 306 aaKnown RBP7.74□□□□□ -1.17
TRIM55-202ENST00000315962 FRMD8P1Q9BZ68 369 aaPredicted RBP7.74□□□□□ -1.17
TRIM55-202ENST00000315962 CAB39LQ9H9S4 337 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 MARCH2Q9P0N8 246 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 FNDC3AQ9Y2H6 1198 aaKnown RBP7.74□□□□□ -1.17
TRIM55-202ENST00000315962 A0A0D9SEW6 157 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 LOC100653049A0A140TA62 436 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 ZBBXA8MT70 800 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 MAP3K7O43318 606 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 TLR5O60602 858 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 TSPAN3O60637 253 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 ATP5HO75947 161 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 KRT34O76011 436 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 SEC24AO95486 1093 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 SLC4A1P02730 911 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 PRKCGP05129 697 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 ABHD2P08910 425 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 DLDP09622 509 aaKnown RBP7.74□□□□□ -1.17
TRIM55-202ENST00000315962 PIRTP0C851 137 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 TYMPP19971 482 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 TBX4P57082 545 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 DLG2Q15700 870 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 HSP90AA5PQ58FG0 334 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 RALGPS1Q5JS13 557 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 VWA5B1Q5TIE3 1220 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 MON1AQ86VX9 555 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 NPAS4Q8IUM7 802 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 ACVR1CQ8NER5 493 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 MZB1Q8WU39 189 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 ARNTL2Q8WYA1 636 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 PSMG2Q969U7 264 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 RTP4Q96DX8 246 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 EXOC2Q96KP1 924 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 PANX3Q96QZ0 392 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 SRPK1Q96SB4 655 aaKnown RBP7.74□□□□□ -1.17
TRIM55-202ENST00000315962 MLPHQ9BV36 600 aaPredicted RBP7.74□□□□□ -1.17
TRIM55-202ENST00000315962 ZNF358Q9NW07 568 aa7.74□□□□□ -1.17
TRIM55-202ENST00000315962 CASP8AP2Q9UKL3 1982 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 HMX2A2RU54 273 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 KCNU1A8MYU2 1149 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 OR6B1O95007 311 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 ZWINTO95229 277 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 APOEP02649 317 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 GJA1P17302 382 aa7.73□□□□□ -1.17
TRIM55-202ENST00000315962 MNX1P50219 401 aaPredicted RBP7.73□□□□□ -1.17
TRIM55-202ENST00000315962 PAFAH1B3Q15102 231 aaKnown RBP7.73□□□□□ -1.17
TRIM55-202ENST00000315962 RBBP5Q15291 538 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms