RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 FSCBQ5H9T9 825 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 FAM47AQ5JRC9 791 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 GPATCH4Q5T3I0 446 aaKnown RBP9.45□□□□□ -0.9
BDNF-201ENST00000314915 SLC6A19Q695T7 634 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 PYHIN1Q6K0P9 492 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 TMEM65Q6PI78 240 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 BRAT1Q6PJG6 821 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 DPY19L3Q6ZPD9 716 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 NOXA1Q86UR1 476 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 MIB1Q86YT6 1006 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 FBXW8Q8N3Y1 598 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 DNAAF3Q8N9W5 541 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 BEST2Q8NFU1 509 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 RAET1EQ8TD07 263 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 XAGE3Q8WTP9 111 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 ZNF606Q8WXB4 792 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 ASB12Q8WXK4 309 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 BAP1Q92560 729 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 DCPSQ96C86 337 aaKnown RBP9.45□□□□□ -0.9
BDNF-201ENST00000314915 ANKRD60Q9BZ19 345 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 SLC19A3Q9BZV2 496 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 SAV1Q9H4B6 383 aaPredicted RBP9.45□□□□□ -0.9
BDNF-201ENST00000314915 NCOR1P1Q9H4R4 102 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 LGR6Q9HBX8 967 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 NYAP2Q9P242 653 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 EXTL2Q9UBQ6 330 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 SERPINB13Q9UIV8 391 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 HRH3Q9Y5N1 445 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 A0A0A6YYK5 440 aaPredicted RBP9.45□□□□□ -0.9
BDNF-201ENST00000314915 TRIM49BA6NDI0 452 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 PSMD9O00233 223 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 ZBTB43O43298 467 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 CHMP2AO43633 222 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 ZNF780AO75290 641 aaPredicted RBP9.45□□□□□ -0.9
BDNF-201ENST00000314915 CYP2C18P33260 490 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 CPOXP36551 454 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 PPP5CP53041 499 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 CLCQ05315 142 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 GNASQ5JWF2 1037 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 KRT79Q5XKE5 535 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 POC5Q8NA72 575 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 FBXO27Q8NI29 283 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 FOXP1Q9H334 677 aaPredicted RBP9.45□□□□□ -0.9
BDNF-201ENST00000314915 EFCAB1Q9HAE3 211 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 PCDH10Q9P2E7 1040 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 PCDHB12Q9Y5F1 795 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 LINC00862A6NCI5 91 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 CHURC1-FNTBB4DL54 471 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 NUPL2O15504 423 aaKnown RBP9.45□□□□□ -0.9
BDNF-201ENST00000314915 PBLDP30039 288 aaPredicted RBP9.45□□□□□ -0.9
BDNF-201ENST00000314915 RPA3P35244 121 aaPredicted RBP9.45□□□□□ -0.9
BDNF-201ENST00000314915 ALDH6A1Q02252 535 aaKnown RBP9.45□□□□□ -0.9
BDNF-201ENST00000314915 IDI1Q13907 227 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 TYW3Q6IPR3 259 aaKnown RBP9.45□□□□□ -0.9
BDNF-201ENST00000314915 UBL4BQ8N7F7 174 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 PBXIP1Q96AQ6 731 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 CCDC124Q96CT7 223 aaKnown RBP9.45□□□□□ -0.9
BDNF-201ENST00000314915 PRR11Q96HE9 360 aaPredicted RBP9.45□□□□□ -0.9
BDNF-201ENST00000314915 NGLY1Q96IV0 654 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 MAGED4Q96JG8 741 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 PACSIN1Q9BY11 444 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.45□□□□□ -0.9
BDNF-201ENST00000314915 FBXO8Q9NRD0 319 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 RIMS3Q9UJD0 308 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 AGO1Q9UL18 857 aaKnown RBP9.45□□□□□ -0.9
BDNF-201ENST00000314915 COPS3Q9UNS2 423 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 TMX2Q9Y320 296 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 ADGRB1O14514 1584 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 PPM1BO75688 479 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 MEOX2P50222 304 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 METAP2P50579 478 aaKnown RBP eCLIP9.45□□□□□ -0.9
BDNF-201ENST00000314915 YWHAEP62258 255 aaKnown RBP9.45□□□□□ -0.9
BDNF-201ENST00000314915 MGAT3Q09327 533 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 MAPK11Q15759 364 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 MIIPQ5JXC2 388 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 GADL1Q6ZQY3 521 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 CREB3L2Q70SY1 520 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 BTLAQ7Z6A9 289 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 TDRD5Q8NAT2 981 aaKnown RBP9.45□□□□□ -0.9
BDNF-201ENST00000314915 TMEM35BQ8NCS4 154 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 MSANTD3Q96H12 275 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 TBATAQ96M53 351 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 CMTM3Q96MX0 182 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 DACH2Q96NX9 599 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.45□□□□□ -0.9
BDNF-201ENST00000314915 MTRRQ9UBK8 725 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 INVSQ9Y283 1065 aa9.45□□□□□ -0.9
BDNF-201ENST00000314915 TULP4Q9NRJ4 1543 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 ABCA8O94911 1581 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 SYNJ2BP-COX16A0A087WUM0 186 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 IFRD1O00458 451 aaPredicted RBP9.44□□□□□ -0.9
BDNF-201ENST00000314915 TBX3O15119 743 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 ZBTB24O43167 697 aaPredicted RBP9.44□□□□□ -0.9
BDNF-201ENST00000314915 LRRN2O75325 713 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 GLAP06280 429 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 ABHD2P08910 425 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 HOXD4P09016 255 aaPredicted RBP9.44□□□□□ -0.9
BDNF-201ENST00000314915 AOC1P19801 751 aa9.44□□□□□ -0.9
BDNF-201ENST00000314915 ERP29P30040 261 aaKnown RBP9.44□□□□□ -0.9
BDNF-201ENST00000314915 RAP1GAPP47736 663 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms