RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 ERVK-10P10266 1014 aa18.31■□□□□ 0.52
SPSB4-201ENST00000310546 ABCG1P45844 678 aa18.31■□□□□ 0.52
SPSB4-201ENST00000310546 MTMR1Q13613 665 aa18.31■□□□□ 0.52
SPSB4-201ENST00000310546 EML3Q32P44 896 aa18.31■□□□□ 0.52
SPSB4-201ENST00000310546 FAM47CQ5HY64 1035 aa18.31■□□□□ 0.52
SPSB4-201ENST00000310546 HGH1Q9BTY7 390 aa18.31■□□□□ 0.52
SPSB4-201ENST00000310546 C1orf50Q9BV19 199 aa18.31■□□□□ 0.52
SPSB4-201ENST00000310546 ADI1Q9BV57 179 aa18.31■□□□□ 0.52
SPSB4-201ENST00000310546 GATA5Q9BWX5 397 aaPredicted RBP18.31■□□□□ 0.52
SPSB4-201ENST00000310546 ZNF518BQ9C0D4 1074 aa18.31■□□□□ 0.52
SPSB4-201ENST00000310546 SNX15Q9NRS6 342 aa18.31■□□□□ 0.52
SPSB4-201ENST00000310546 RIC8BQ9NVN3 520 aa18.31■□□□□ 0.52
SPSB4-201ENST00000310546 MYO18AQ92614 2054 aaKnown RBP18.3■□□□□ 0.52
SPSB4-201ENST00000310546 RNF103-CHMP3A0A140T963 221 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 NRP1O14786 923 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 PFDN6O15212 129 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 TRIM13O60858 407 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 TTKP33981 857 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 GRIA3P42263 894 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 MAGEA3P43357 314 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 SCYL2Q6P3W7 929 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 GK5Q6ZS86 529 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 ADAMTS16Q8TE57 1224 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 FBXL20Q96IG2 436 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 ANKRD36BP1Q96IX9 119 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 CPXM1Q96SM3 734 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 SCHIP1Q9P0W5 487 aaPredicted RBP18.3■□□□□ 0.52
SPSB4-201ENST00000310546 PCDHGC3Q9UN70 934 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 HES2Q9Y543 173 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 CPQQ9Y646 472 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 DOCK1Q14185 1865 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 TADA2AO75478 443 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 TFEBP19484 476 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 MLLT10P55197 1068 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 ORC1Q13415 861 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 PPP4R4Q6NUP7 873 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 LAYNQ6UX15 382 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 SAPCD2Q86UD0 394 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 MCUQ8NE86 351 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 OLFM1Q99784 485 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 NTPCRQ9BSD7 190 aaKnown RBP18.3■□□□□ 0.52
SPSB4-201ENST00000310546 PRDM16Q9HAZ2 1276 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 AGO4Q9HCK5 861 aaKnown RBP18.3■□□□□ 0.52
SPSB4-201ENST00000310546 AURKCQ9UQB9 309 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 SLC30A1Q9Y6M5 507 aa18.3■□□□□ 0.52
SPSB4-201ENST00000310546 IQCA1LA6NCM1 817 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 TRIM64CA6NLI5 447 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 MATN1P21941 496 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 SLC7A1P30825 629 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 RPL14P50914 215 aaKnown RBP18.29■□□□□ 0.52
SPSB4-201ENST00000310546 GALNT2Q10471 571 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 DLG2Q15700 870 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 INSCQ1MX18 579 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 TKFCQ3LXA3 575 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 LRRC8EQ6NSJ5 796 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 TTC30AQ86WT1 665 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 SREK1Q8WXA9 508 aaKnown RBP18.29■□□□□ 0.52
SPSB4-201ENST00000310546 PGLYRP2Q96PD5 576 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 RNF157Q96PX1 679 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 MUC3BQ9H195 1237 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 AS3MTQ9HBK9 375 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 CDYLQ9Y232 598 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 PCDHGA7Q9Y5G6 932 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 CSADQ9Y600 493 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 COPG1Q9Y678 874 aaKnown RBP18.29■□□□□ 0.52
SPSB4-201ENST00000310546 SSC5DA1L4H1 1573 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 PRORSD1PA6NEY8 169 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 FAM47E-STBD1D6RA91 191 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 LYPLA2O95372 231 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 IRF9Q00978 393 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 BPIFB6Q8NFQ5 453 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 CANT1Q8WVQ1 401 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 CAB39LQ9H9S4 337 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 ZNF112Q9UJU3 913 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 TMA7Q9Y2S6 64 aaKnown RBP18.29■□□□□ 0.52
SPSB4-201ENST00000310546 G3V2L1 256 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 PIGNO95427 931 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 NME5P56597 212 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 NIPAL4Q0D2K0 466 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 MERTKQ12866 999 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 OXA1LQ15070 435 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 C15orf59Q2T9L4 293 aaPredicted RBP18.29■□□□□ 0.52
SPSB4-201ENST00000310546 ZNF354CQ86Y25 554 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 MCF2L2Q86YR7 1114 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 SAMD3Q8N6K7 520 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 PBXIP1Q96AQ6 731 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 HAPLN2Q9GZV7 340 aa18.29■□□□□ 0.52
SPSB4-201ENST00000310546 SUCOQ9UBS9 1254 aaKnown RBP18.29■□□□□ 0.52
SPSB4-201ENST00000310546 ZNF214Q9UL59 606 aaPredicted RBP18.29■□□□□ 0.52
SPSB4-201ENST00000310546 KPNA7A9QM74 516 aa18.28■□□□□ 0.52
SPSB4-201ENST00000310546 CLPXO76031 633 aa18.28■□□□□ 0.52
SPSB4-201ENST00000310546 HDCP19113 662 aa18.28■□□□□ 0.52
SPSB4-201ENST00000310546 EEF1B2P24534 225 aaKnown RBP18.28■□□□□ 0.52
SPSB4-201ENST00000310546 IDUAP35475 653 aa18.28■□□□□ 0.52
SPSB4-201ENST00000310546 NEK2P51955 445 aa18.28■□□□□ 0.52
SPSB4-201ENST00000310546 MYL6P60660 151 aa18.28■□□□□ 0.52
SPSB4-201ENST00000310546 BFSP2Q13515 415 aa18.28■□□□□ 0.52
SPSB4-201ENST00000310546 PGS1Q32NB8 556 aa18.28■□□□□ 0.52
SPSB4-201ENST00000310546 ARL13AQ5H913 290 aaPredicted RBP18.28■□□□□ 0.52
SPSB4-201ENST00000310546 GLRA4Q5JXX5 417 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms