RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 KCNT1Q5JUK3 1230 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 PCID2Q5JVF3 399 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 ANKRD20A2Q5SQ80 823 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 ANKRD20A1Q5TYW2 823 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 LRRC8BQ6P9F7 803 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 ZNF598Q86UK7 904 aaKnown RBP6.1□□□□□ -1.43
SEC22A-201ENST00000309934 STK40Q8N2I9 435 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 PLD5Q8N7P1 536 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 RTL3Q8N8U3 475 aaKnown RBP6.1□□□□□ -1.43
SEC22A-201ENST00000309934 HEXDCQ8WVB3 486 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 RAPGEF5Q92565 580 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 EFHD2Q96C19 240 aaPredicted RBP6.1□□□□□ -1.43
SEC22A-201ENST00000309934 CHMP6Q96FZ7 201 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 OLFM3Q96PB7 478 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 EPC1Q9H2F5 836 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 CDHR5Q9HBB8 845 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 PAK6Q9NQU5 681 aaPredicted RBP6.1□□□□□ -1.43
SEC22A-201ENST00000309934 TXLNGQ9NUQ3 528 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 GGA2Q9UJY4 613 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 TBC1D30Q9Y2I9 924 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 TIMM13Q9Y5L4 95 aaPredicted RBP6.1□□□□□ -1.43
SEC22A-201ENST00000309934 CFAP99D6REC4 459 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 H3BQF6 201 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 MAN1A2O60476 641 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 STMN1P16949 149 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 KCNJ1P48048 391 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 CCL23P55773 120 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 POLR2LP62875 67 aaKnown RBP6.1□□□□□ -1.43
SEC22A-201ENST00000309934 IL10RBQ08334 325 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 SLC29A2Q14542 456 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 RAPH1Q70E73 1250 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 CRLF3Q8IUI8 442 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 WFIKKN2Q8TEU8 576 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 KBTBD7Q8WVZ9 684 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 FATE1Q969F0 183 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 CDCA3Q99618 268 aaPredicted RBP6.1□□□□□ -1.43
SEC22A-201ENST00000309934 TMEM121Q9BTD3 319 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 TRIM55Q9BYV6 548 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 EPN3Q9H201 632 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 NDE1Q9NXR1 346 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 UBA2Q9UBT2 640 aaPredicted RBP6.1□□□□□ -1.43
SEC22A-201ENST00000309934 ATP6V1HQ9UI12 483 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 LRRC37A2A6NM11 1700 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 NOTOA8MTQ0 251 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 SLCO1B7G3V0H7 640 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 QSOX1O00391 747 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 TLR5O60602 858 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 IGSF6O95976 241 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 FGF1P05230 155 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 RALBP11234 206 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 CRABP2P29373 138 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 CTNNB1P35222 781 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 MAPK9P45984 424 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 CCR3P51677 355 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 SLC18A1P54219 525 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 OLR1P78380 273 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 CAP1Q01518 475 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 HNRNPDQ14103 355 aaKnown RBP6.1□□□□□ -1.43
SEC22A-201ENST00000309934 PKDCCQ504Y2 493 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 RAB41Q5JT25 222 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 LRRC8EQ6NSJ5 796 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 DSG4Q86SJ6 1040 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 SETD3Q86TU7 594 aaPredicted RBP6.1□□□□□ -1.43
SEC22A-201ENST00000309934 OSTM1Q86WC4 334 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 STX12Q86Y82 276 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 PPM1NQ8N819 430 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 ZNF461Q8TAF7 563 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 PEX13Q92968 403 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 IGSF21Q96ID5 467 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 TSGA13Q96PP4 275 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 FERD3LQ96RJ6 166 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 TBL1YQ9BQ87 522 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 TRIM56Q9BRZ2 755 aaKnown RBP6.1□□□□□ -1.43
SEC22A-201ENST00000309934 SPON2Q9BUD6 331 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 RNF39Q9H2S5 420 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 CHST7Q9NS84 486 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 VANGL2Q9ULK5 521 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 TRIM33Q9UPN9 1127 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 C15orf41Q9Y2V0 281 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 SPEF1Q9Y4P9 236 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 PCDHA11Q9Y5I1 949 aa6.1□□□□□ -1.43
SEC22A-201ENST00000309934 POLR2AP24928 1970 aaKnown RBP6.09□□□□□ -1.43
SEC22A-201ENST00000309934 MYBPHLA2RUH7 354 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 TMEM247A6NEH6 219 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 KCNU1A8MYU2 1149 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 PIK3R2O00459 728 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 KIAA0355O15063 1070 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 TLL1O43897 1013 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 ACSL4O60488 711 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 CKMP06732 381 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 GALTP07902 379 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 PRKACAP17612 351 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 ERCC2P18074 760 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 PRKACBP22694 351 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 AMPD1P23109 780 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 RPL22P35268 128 aaKnown RBP6.09□□□□□ -1.43
SEC22A-201ENST00000309934 GP5P40197 560 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 IFNAR2P48551 515 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 IRX4P78413 519 aa6.09□□□□□ -1.43
SEC22A-201ENST00000309934 PHEXP78562 749 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms